EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000005561 (Gene tree)
Gene ID: 558184
Gene Symbol: gfm2
Alias: si:dkey-35i22.3|zgc:153835
Full Name: G elongation factor%2C mitochondrial 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22232 bases
Position: chr5:34578479-34600710
Accession: ZDB-GENE-060201-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000006504	GTP_EFTU	PF00009.27	3e-65	1	1
ENSDARP00000006504	MMR_HSR1	PF01926.23	7e-05	1	1
ENSDARP00000006504	GTP_EFTU_D2	PF03144.25	2.8e-09	1	1
ENSDARP00000006504	EFG_IV	PF03764.18	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000016314	-	2741	XM_009301510	ENSDARP00000006504	762 (aa)	XP_009299785	A0JMI9
ENSDART00000138672	-	766	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000005561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000005561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000005561	gfm2	70	32.026	ENSDARG00000012261	eftud2	60	30.921
ENSDARG00000005561	gfm2	95	35.060	ENSDARG00000063624	gfm1	96	34.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000005561	gfm2	95	68.852	ENSG00000164347	GFM2	100	92.188	Homo_sapiens
ENSDARG00000005561	gfm2	98	77.660	ENSAPOG00000005965	gfm2	98	77.527	Acanthochromis_polyacanthus
ENSDARG00000005561	gfm2	98	67.331	ENSAMEG00000000544	GFM2	96	67.331	Ailuropoda_melanoleuca
ENSDARG00000005561	gfm2	93	75.312	ENSACIG00000003338	gfm2	99	74.202	Amphilophus_citrinellus
ENSDARG00000005561	gfm2	98	77.926	ENSAOCG00000014342	gfm2	98	77.926	Amphiprion_ocellaris
ENSDARG00000005561	gfm2	98	77.527	ENSAPEG00000000424	gfm2	98	77.527	Amphiprion_percula
ENSDARG00000005561	gfm2	98	76.228	ENSATEG00000010821	gfm2	98	76.228	Anabas_testudineus
ENSDARG00000005561	gfm2	96	68.784	ENSAPLG00000007221	GFM2	95	69.054	Anas_platyrhynchos
ENSDARG00000005561	gfm2	96	66.259	ENSACAG00000009011	GFM2	94	66.667	Anolis_carolinensis
ENSDARG00000005561	gfm2	98	58.090	ENSANAG00000027737	GFM2	96	58.090	Aotus_nancymaae
ENSDARG00000005561	gfm2	97	76.273	ENSACLG00000027430	gfm2	99	75.510	Astatotilapia_calliptera
ENSDARG00000005561	gfm2	100	78.414	ENSAMXG00000009979	gfm2	100	78.414	Astyanax_mexicanus
ENSDARG00000005561	gfm2	98	67.862	ENSBTAG00000015519	GFM2	97	67.862	Bos_taurus
ENSDARG00000005561	gfm2	93	38.504	WBGene00022491	Y119D3B.14	97	38.483	Caenorhabditis_elegans
ENSDARG00000005561	gfm2	96	68.464	ENSCJAG00000016802	GFM2	95	68.464	Callithrix_jacchus
ENSDARG00000005561	gfm2	96	67.751	ENSCAFG00000008298	GFM2	94	67.751	Canis_familiaris
ENSDARG00000005561	gfm2	96	67.751	ENSCAFG00020016998	GFM2	97	67.751	Canis_lupus_dingo
ENSDARG00000005561	gfm2	98	67.729	ENSCHIG00000012765	GFM2	97	67.729	Capra_hircus
ENSDARG00000005561	gfm2	62	68.399	ENSTSYG00000011664	GFM2	93	69.854	Carlito_syrichta
ENSDARG00000005561	gfm2	93	47.230	ENSCAPG00000003480	GFM2	96	46.953	Cavia_aperea
ENSDARG00000005561	gfm2	98	65.522	ENSCPOG00000006332	GFM2	97	65.522	Cavia_porcellus
ENSDARG00000005561	gfm2	98	67.995	ENSCCAG00000029580	GFM2	97	67.995	Cebus_capucinus
ENSDARG00000005561	gfm2	98	67.463	ENSCATG00000036394	GFM2	97	67.463	Cercocebus_atys
ENSDARG00000005561	gfm2	97	67.068	ENSCLAG00000013440	GFM2	96	67.068	Chinchilla_lanigera
ENSDARG00000005561	gfm2	98	67.463	ENSCSAG00000015464	GFM2	97	67.463	Chlorocebus_sabaeus
ENSDARG00000005561	gfm2	84	68.254	ENSCHOG00000002245	GFM2	82	68.254	Choloepus_hoffmanni
ENSDARG00000005561	gfm2	96	70.612	ENSCPBG00000000761	GFM2	97	70.612	Chrysemys_picta_bellii
ENSDARG00000005561	gfm2	93	44.663	ENSCING00000003377	-	96	44.663	Ciona_intestinalis
ENSDARG00000005561	gfm2	93	43.213	ENSCSAVG00000002108	-	99	48.299	Ciona_savignyi
ENSDARG00000005561	gfm2	98	67.463	ENSCANG00000042500	GFM2	97	67.463	Colobus_angolensis_palliatus
ENSDARG00000005561	gfm2	99	64.276	ENSCGRG00001022802	Gfm2	98	64.928	Cricetulus_griseus_chok1gshd
ENSDARG00000005561	gfm2	99	64.276	ENSCGRG00000001439	Gfm2	98	64.928	Cricetulus_griseus_crigri
ENSDARG00000005561	gfm2	98	76.026	ENSCSEG00000013115	gfm2	98	76.026	Cynoglossus_semilaevis
ENSDARG00000005561	gfm2	97	75.403	ENSCVAG00000010057	gfm2	98	74.533	Cyprinodon_variegatus
ENSDARG00000005561	gfm2	96	66.847	ENSDNOG00000005118	GFM2	94	66.847	Dasypus_novemcinctus
ENSDARG00000005561	gfm2	98	65.642	ENSDORG00000016231	Gfm2	96	65.642	Dipodomys_ordii
ENSDARG00000005561	gfm2	97	42.782	FBgn0051159	mRRF2	96	46.329	Drosophila_melanogaster
ENSDARG00000005561	gfm2	73	70.130	ENSETEG00000004090	GFM2	72	69.481	Echinops_telfairi
ENSDARG00000005561	gfm2	83	80.128	ENSEBUG00000012181	gfm2	94	80.128	Eptatretus_burgeri
ENSDARG00000005561	gfm2	98	60.477	ENSEASG00005018285	GFM2	96	70.854	Equus_asinus_asinus
ENSDARG00000005561	gfm2	98	61.487	ENSECAG00000006640	GFM2	96	61.620	Equus_caballus
ENSDARG00000005561	gfm2	88	62.500	ENSEEUG00000004656	GFM2	89	62.500	Erinaceus_europaeus
ENSDARG00000005561	gfm2	99	76.447	ENSELUG00000003075	gfm2	98	76.447	Esox_lucius
ENSDARG00000005561	gfm2	97	67.867	ENSFCAG00000011977	GFM2	96	67.867	Felis_catus
ENSDARG00000005561	gfm2	95	69.559	ENSFALG00000010106	GFM2	93	69.697	Ficedula_albicollis
ENSDARG00000005561	gfm2	96	62.466	ENSFDAG00000004993	GFM2	84	75.500	Fukomys_damarensis
ENSDARG00000005561	gfm2	97	75.941	ENSFHEG00000006210	gfm2	94	77.317	Fundulus_heteroclitus
ENSDARG00000005561	gfm2	98	73.698	ENSGMOG00000003177	gfm2	98	73.965	Gadus_morhua
ENSDARG00000005561	gfm2	98	67.194	ENSGALG00000014939	GFM2	98	67.457	Gallus_gallus
ENSDARG00000005561	gfm2	99	74.011	ENSGAFG00000000439	gfm2	98	74.011	Gambusia_affinis
ENSDARG00000005561	gfm2	99	73.629	ENSGACG00000015889	gfm2	99	73.655	Gasterosteus_aculeatus
ENSDARG00000005561	gfm2	96	69.252	ENSGAGG00000012347	GFM2	94	69.524	Gopherus_agassizii
ENSDARG00000005561	gfm2	91	68.188	ENSGGOG00000013739	GFM2	93	68.459	Gorilla_gorilla
ENSDARG00000005561	gfm2	97	76.408	ENSHBUG00000011021	gfm2	97	76.408	Haplochromis_burtoni
ENSDARG00000005561	gfm2	95	68.356	ENSHGLG00000000419	GFM2	99	68.961	Heterocephalus_glaber_female
ENSDARG00000005561	gfm2	96	68.022	ENSHGLG00100018383	GFM2	99	68.961	Heterocephalus_glaber_male
ENSDARG00000005561	gfm2	96	70.040	ENSHCOG00000008208	gfm2	99	66.022	Hippocampus_comes
ENSDARG00000005561	gfm2	99	78.776	ENSIPUG00000024153	gfm2	99	78.776	Ictalurus_punctatus
ENSDARG00000005561	gfm2	97	67.426	ENSSTOG00000007931	GFM2	96	67.426	Ictidomys_tridecemlineatus
ENSDARG00000005561	gfm2	98	64.542	ENSJJAG00000024278	Gfm2	96	64.542	Jaculus_jaculus
ENSDARG00000005561	gfm2	98	75.067	ENSKMAG00000013277	gfm2	97	75.067	Kryptolebias_marmoratus
ENSDARG00000005561	gfm2	99	74.772	ENSLBEG00000020327	gfm2	99	74.512	Labrus_bergylta
ENSDARG00000005561	gfm2	98	69.974	ENSLACG00000004622	GFM2	94	70.659	Latimeria_chalumnae
ENSDARG00000005561	gfm2	96	73.541	ENSLOCG00000005368	gfm2	98	73.406	Lepisosteus_oculatus
ENSDARG00000005561	gfm2	96	68.114	ENSLAFG00000018575	GFM2	94	68.114	Loxodonta_africana
ENSDARG00000005561	gfm2	98	67.463	ENSMFAG00000039713	GFM2	97	67.463	Macaca_fascicularis
ENSDARG00000005561	gfm2	98	67.331	ENSMMUG00000019998	GFM2	99	67.331	Macaca_mulatta
ENSDARG00000005561	gfm2	98	67.331	ENSMNEG00000034666	GFM2	97	67.331	Macaca_nemestrina
ENSDARG00000005561	gfm2	98	67.331	ENSMLEG00000038075	GFM2	97	67.331	Mandrillus_leucophaeus
ENSDARG00000005561	gfm2	98	75.899	ENSMAMG00000000452	gfm2	99	75.899	Mastacembelus_armatus
ENSDARG00000005561	gfm2	97	76.408	ENSMZEG00005004469	gfm2	99	75.135	Maylandia_zebra
ENSDARG00000005561	gfm2	96	66.351	ENSMGAG00000015100	GFM2	94	66.351	Meleagris_gallopavo
ENSDARG00000005561	gfm2	96	64.189	ENSMAUG00000022103	Gfm2	94	64.865	Mesocricetus_auratus
ENSDARG00000005561	gfm2	98	67.065	ENSMICG00000000749	GFM2	97	67.065	Microcebus_murinus
ENSDARG00000005561	gfm2	97	66.533	ENSMOCG00000004402	-	96	67.202	Microtus_ochrogaster
ENSDARG00000005561	gfm2	65	67.465	ENSMOCG00000019032	-	94	67.066	Microtus_ochrogaster
ENSDARG00000005561	gfm2	95	74.518	ENSMMOG00000004758	gfm2	99	73.416	Mola_mola
ENSDARG00000005561	gfm2	96	70.000	ENSMODG00000001892	GFM2	95	69.865	Monodelphis_domestica
ENSDARG00000005561	gfm2	98	76.032	ENSMALG00000010323	gfm2	98	76.032	Monopterus_albus
ENSDARG00000005561	gfm2	98	67.156	MGP_CAROLIEiJ_G0018814	Gfm2	96	67.156	Mus_caroli
ENSDARG00000005561	gfm2	98	66.844	ENSMUSG00000021666	Gfm2	96	66.844	Mus_musculus
ENSDARG00000005561	gfm2	98	67.023	MGP_PahariEiJ_G0015889	Gfm2	96	67.023	Mus_pahari
ENSDARG00000005561	gfm2	98	66.711	MGP_SPRETEiJ_G0019696	Gfm2	94	67.935	Mus_spretus
ENSDARG00000005561	gfm2	92	64.489	ENSMPUG00000005688	GFM2	99	64.489	Mustela_putorius_furo
ENSDARG00000005561	gfm2	97	67.111	ENSMLUG00000004761	GFM2	96	67.111	Myotis_lucifugus
ENSDARG00000005561	gfm2	95	67.667	ENSNGAG00000013586	Gfm2	94	67.667	Nannospalax_galili
ENSDARG00000005561	gfm2	96	74.697	ENSNBRG00000009181	gfm2	99	74.697	Neolamprologus_brichardi
ENSDARG00000005561	gfm2	95	68.630	ENSNLEG00000004979	GFM2	94	68.630	Nomascus_leucogenys
ENSDARG00000005561	gfm2	75	82.500	ENSMEUG00000007885	-	74	82.500	Notamacropus_eugenii
ENSDARG00000005561	gfm2	96	60.516	ENSOPRG00000001846	GFM2	94	60.516	Ochotona_princeps
ENSDARG00000005561	gfm2	98	67.244	ENSODEG00000002193	GFM2	98	67.244	Octodon_degus
ENSDARG00000005561	gfm2	97	76.542	ENSONIG00000011183	gfm2	97	76.542	Oreochromis_niloticus
ENSDARG00000005561	gfm2	99	67.857	ENSOANG00000015776	GFM2	97	67.857	Ornithorhynchus_anatinus
ENSDARG00000005561	gfm2	95	68.587	ENSOCUG00000005349	GFM2	96	68.587	Oryctolagus_cuniculus
ENSDARG00000005561	gfm2	98	74.431	ENSORLG00000003360	gfm2	99	74.431	Oryzias_latipes
ENSDARG00000005561	gfm2	98	71.154	ENSORLG00020011110	gfm2	99	75.178	Oryzias_latipes_hni
ENSDARG00000005561	gfm2	98	74.699	ENSORLG00015018196	gfm2	99	75.606	Oryzias_latipes_hsok
ENSDARG00000005561	gfm2	98	74.431	ENSOMEG00000013774	gfm2	99	73.377	Oryzias_melastigma
ENSDARG00000005561	gfm2	98	68.484	ENSOGAG00000008961	GFM2	96	68.484	Otolemur_garnettii
ENSDARG00000005561	gfm2	98	67.463	ENSOARG00000004491	GFM2	96	67.463	Ovis_aries
ENSDARG00000005561	gfm2	95	68.767	ENSPPAG00000036359	GFM2	94	68.767	Pan_paniscus
ENSDARG00000005561	gfm2	97	67.867	ENSPPRG00000002671	GFM2	96	67.867	Panthera_pardus
ENSDARG00000005561	gfm2	97	68.000	ENSPTIG00000021698	GFM2	96	68.000	Panthera_tigris_altaica
ENSDARG00000005561	gfm2	95	68.767	ENSPTRG00000016989	GFM2	94	68.767	Pan_troglodytes
ENSDARG00000005561	gfm2	98	67.463	ENSPANG00000013600	GFM2	97	67.463	Papio_anubis
ENSDARG00000005561	gfm2	93	73.558	ENSPKIG00000018878	gfm2	95	73.418	Paramormyrops_kingsleyae
ENSDARG00000005561	gfm2	96	69.429	ENSPSIG00000012954	GFM2	96	70.110	Pelodiscus_sinensis
ENSDARG00000005561	gfm2	97	70.541	ENSPMGG00000016783	gfm2	99	69.865	Periophthalmus_magnuspinnatus
ENSDARG00000005561	gfm2	97	67.202	ENSPEMG00000000622	Gfm2	95	67.202	Peromyscus_maniculatus_bairdii
ENSDARG00000005561	gfm2	87	56.745	ENSPMAG00000000472	gfm2	99	57.771	Petromyzon_marinus
ENSDARG00000005561	gfm2	62	63.354	ENSPCIG00000020810	-	82	64.780	Phascolarctos_cinereus
ENSDARG00000005561	gfm2	97	76.542	ENSPFOG00000012381	gfm2	97	76.542	Poecilia_formosa
ENSDARG00000005561	gfm2	97	76.676	ENSPLAG00000014750	gfm2	97	76.676	Poecilia_latipinna
ENSDARG00000005561	gfm2	97	76.810	ENSPMEG00000005813	gfm2	99	77.730	Poecilia_mexicana
ENSDARG00000005561	gfm2	97	75.737	ENSPREG00000021026	gfm2	96	75.737	Poecilia_reticulata
ENSDARG00000005561	gfm2	95	68.767	ENSPPYG00000015556	GFM2	92	68.767	Pongo_abelii
ENSDARG00000005561	gfm2	88	70.075	ENSPCAG00000015284	GFM2	86	70.075	Procavia_capensis
ENSDARG00000005561	gfm2	98	67.065	ENSPCOG00000022606	GFM2	97	67.065	Propithecus_coquereli
ENSDARG00000005561	gfm2	98	67.065	ENSPVAG00000005391	GFM2	97	67.065	Pteropus_vampyrus
ENSDARG00000005561	gfm2	97	76.408	ENSPNYG00000001950	gfm2	99	75.000	Pundamilia_nyererei
ENSDARG00000005561	gfm2	100	80.130	ENSPNAG00000018467	gfm2	100	80.130	Pygocentrus_nattereri
ENSDARG00000005561	gfm2	98	66.445	ENSRNOG00000025285	Gfm2	96	66.711	Rattus_norvegicus
ENSDARG00000005561	gfm2	98	67.065	ENSRBIG00000040962	GFM2	97	67.065	Rhinopithecus_bieti
ENSDARG00000005561	gfm2	98	67.331	ENSRROG00000036459	GFM2	97	67.331	Rhinopithecus_roxellana
ENSDARG00000005561	gfm2	95	34.185	YJL102W	-	98	33.537	Saccharomyces_cerevisiae
ENSDARG00000005561	gfm2	98	67.862	ENSSBOG00000021848	GFM2	97	67.862	Saimiri_boliviensis_boliviensis
ENSDARG00000005561	gfm2	96	68.598	ENSSHAG00000017593	GFM2	95	68.194	Sarcophilus_harrisii
ENSDARG00000005561	gfm2	98	74.834	ENSSFOG00015016059	gfm2	99	74.100	Scleropages_formosus
ENSDARG00000005561	gfm2	98	75.766	ENSSMAG00000010773	gfm2	99	76.662	Scophthalmus_maximus
ENSDARG00000005561	gfm2	95	77.931	ENSSDUG00000021273	gfm2	99	77.931	Seriola_dumerili
ENSDARG00000005561	gfm2	98	76.831	ENSSLDG00000014952	gfm2	98	76.831	Seriola_lalandi_dorsalis
ENSDARG00000005561	gfm2	84	38.813	ENSSLDG00000000387	-	96	38.813	Seriola_lalandi_dorsalis
ENSDARG00000005561	gfm2	78	66.564	ENSSARG00000009381	GFM2	77	66.564	Sorex_araneus
ENSDARG00000005561	gfm2	96	60.893	ENSSPUG00000000593	GFM2	91	61.028	Sphenodon_punctatus
ENSDARG00000005561	gfm2	98	77.333	ENSSPAG00000014163	gfm2	98	77.333	Stegastes_partitus
ENSDARG00000005561	gfm2	96	68.428	ENSSSCG00000014074	GFM2	95	68.428	Sus_scrofa
ENSDARG00000005561	gfm2	95	68.595	ENSTGUG00000005985	GFM2	93	68.595	Taeniopygia_guttata
ENSDARG00000005561	gfm2	95	73.297	ENSTRUG00000018513	gfm2	96	74.796	Takifugu_rubripes
ENSDARG00000005561	gfm2	95	69.146	ENSTNIG00000013438	gfm2	99	69.146	Tetraodon_nigroviridis
ENSDARG00000005561	gfm2	90	64.511	ENSTBEG00000012713	GFM2	94	64.511	Tupaia_belangeri
ENSDARG00000005561	gfm2	98	65.113	ENSTTRG00000005188	GFM2	96	65.113	Tursiops_truncatus
ENSDARG00000005561	gfm2	96	68.237	ENSUMAG00000007328	GFM2	95	68.237	Ursus_maritimus
ENSDARG00000005561	gfm2	90	62.745	ENSVPAG00000007367	GFM2	90	62.745	Vicugna_pacos
ENSDARG00000005561	gfm2	98	66.667	ENSVVUG00000009245	GFM2	96	66.667	Vulpes_vulpes
ENSDARG00000005561	gfm2	92	63.510	ENSXETG00000005076	gfm2	99	63.510	Xenopus_tropicalis
ENSDARG00000005561	gfm2	95	76.891	ENSXCOG00000015007	gfm2	99	76.891	Xiphophorus_couchianus
ENSDARG00000005561	gfm2	99	75.163	ENSXMAG00000000772	gfm2	99	75.163	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0032543	mitochondrial translation	-	ISS	Process
GO:0032790	ribosome disassembly	21873635.	IBA	Process
GO:0032790	ribosome disassembly	-	IEA	Process
GO:0032790	ribosome disassembly	-	ISS	Process