EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000005772 (Gene tree)
Gene ID: 317639
Gene Symbol: tsr2
Alias: chunp6926|dt1p1a10l|un-named hi1116a|unm hi1116a|zgc:109784
Full Name: TSR2%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8572 bases
Position: chr8:8341082-8349653
Accession: ZDB-GENE-021231-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000138385	WGG	PF10273.9	1.5e-25	1	1
ENSDARP00000026184	WGG	PF10273.9	2.2e-25	1	1
ENSDARP00000151828	WGG	PF10273.9	2.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000188259	-	1015	-	ENSDARP00000151828	182 (aa)	-	F1QR86
ENSDART00000164731	-	366	-	ENSDARP00000138385	122 (aa)	-	A0A0R4IPZ4
ENSDART00000025214	-	1132	XM_021478182	ENSDARP00000026184	182 (aa)	XP_021333857	F1QR86

Gene Model

Click here to download ENSDARG00000005772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000005772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000005772	tsr2	98	52.101	ENSG00000158526	TSR2	100	43.979	Homo_sapiens
ENSDARG00000005772	tsr2	84	54.369	ENSAPOG00000004150	-	91	47.799	Acanthochromis_polyacanthus
ENSDARG00000005772	tsr2	98	52.941	ENSAMEG00000002469	TSR2	100	40.594	Ailuropoda_melanoleuca
ENSDARG00000005772	tsr2	95	63.793	ENSACIG00000004880	tsr2	89	60.156	Amphilophus_citrinellus
ENSDARG00000005772	tsr2	94	60.000	ENSAOCG00000015893	tsr2	95	48.876	Amphiprion_ocellaris
ENSDARG00000005772	tsr2	94	60.000	ENSAPEG00000023549	tsr2	95	51.685	Amphiprion_percula
ENSDARG00000005772	tsr2	95	62.931	ENSATEG00000019009	-	98	52.809	Anabas_testudineus
ENSDARG00000005772	tsr2	98	62.185	ENSACAG00000012270	TSR2	100	50.526	Anolis_carolinensis
ENSDARG00000005772	tsr2	98	52.941	ENSANAG00000000062	TSR2	100	43.979	Aotus_nancymaae
ENSDARG00000005772	tsr2	95	65.517	ENSACLG00000014269	tsr2	98	56.983	Astatotilapia_calliptera
ENSDARG00000005772	tsr2	99	77.686	ENSAMXG00000016817	tsr2	89	69.110	Astyanax_mexicanus
ENSDARG00000005772	tsr2	89	49.541	ENSBTAG00000018311	-	59	50.000	Bos_taurus
ENSDARG00000005772	tsr2	98	54.622	ENSBTAG00000015858	TSR2	99	46.597	Bos_taurus
ENSDARG00000005772	tsr2	98	53.782	ENSCJAG00000000251	TSR2	100	44.503	Callithrix_jacchus
ENSDARG00000005772	tsr2	98	52.941	ENSCAFG00000016440	TSR2	100	47.090	Canis_familiaris
ENSDARG00000005772	tsr2	98	52.941	ENSCAFG00020014044	TSR2	100	47.090	Canis_lupus_dingo
ENSDARG00000005772	tsr2	89	48.624	ENSCHIG00000009963	-	57	48.624	Capra_hircus
ENSDARG00000005772	tsr2	98	51.261	ENSTSYG00000005670	-	100	39.109	Carlito_syrichta
ENSDARG00000005772	tsr2	86	50.476	ENSTSYG00000031321	-	95	41.243	Carlito_syrichta
ENSDARG00000005772	tsr2	86	54.286	ENSTSYG00000031644	-	97	42.373	Carlito_syrichta
ENSDARG00000005772	tsr2	98	50.420	ENSCPOG00000033139	TSR2	99	43.011	Cavia_porcellus
ENSDARG00000005772	tsr2	98	52.941	ENSCCAG00000025421	TSR2	100	43.979	Cebus_capucinus
ENSDARG00000005772	tsr2	98	52.101	ENSCATG00000036868	-	100	44.503	Cercocebus_atys
ENSDARG00000005772	tsr2	98	51.261	ENSCATG00000045152	-	99	43.979	Cercocebus_atys
ENSDARG00000005772	tsr2	98	52.941	ENSCLAG00000007235	TSR2	99	42.132	Chinchilla_lanigera
ENSDARG00000005772	tsr2	98	51.261	ENSCSAG00000012366	-	62	51.261	Chlorocebus_sabaeus
ENSDARG00000005772	tsr2	98	50.420	ENSCSAG00000000402	-	100	41.753	Chlorocebus_sabaeus
ENSDARG00000005772	tsr2	98	54.622	ENSCHOG00000001068	TSR2	100	42.574	Choloepus_hoffmanni
ENSDARG00000005772	tsr2	95	33.511	ENSCING00000002386	-	55	39.623	Ciona_intestinalis
ENSDARG00000005772	tsr2	95	31.351	ENSCSAVG00000009298	-	94	31.351	Ciona_savignyi
ENSDARG00000005772	tsr2	75	50.549	ENSCANG00000036773	-	88	39.759	Colobus_angolensis_palliatus
ENSDARG00000005772	tsr2	98	52.941	ENSCANG00000043156	-	100	45.026	Colobus_angolensis_palliatus
ENSDARG00000005772	tsr2	98	51.261	ENSCGRG00001023321	Tsr2	99	41.089	Cricetulus_griseus_chok1gshd
ENSDARG00000005772	tsr2	98	51.261	ENSCGRG00000010855	Tsr2	99	42.132	Cricetulus_griseus_crigri
ENSDARG00000005772	tsr2	93	60.345	ENSCSEG00000017003	tsr2	98	51.111	Cynoglossus_semilaevis
ENSDARG00000005772	tsr2	95	62.069	ENSCVAG00000001845	tsr2	98	53.371	Cyprinodon_variegatus
ENSDARG00000005772	tsr2	98	55.462	ENSDORG00000025574	Tsr2	99	44.974	Dipodomys_ordii
ENSDARG00000005772	tsr2	89	30.556	FBgn0039404	CG14543	55	30.556	Drosophila_melanogaster
ENSDARG00000005772	tsr2	98	54.622	ENSETEG00000018510	TSR2	100	42.365	Echinops_telfairi
ENSDARG00000005772	tsr2	98	54.622	ENSEBUG00000012895	tsr2	95	46.961	Eptatretus_burgeri
ENSDARG00000005772	tsr2	98	53.782	ENSEASG00005013005	TSR2	99	44.211	Equus_asinus_asinus
ENSDARG00000005772	tsr2	98	53.782	ENSECAG00000029844	TSR2	86	44.211	Equus_caballus
ENSDARG00000005772	tsr2	96	68.595	ENSELUG00000007768	tsr2	99	59.043	Esox_lucius
ENSDARG00000005772	tsr2	98	53.782	ENSFCAG00000002226	TSR2	100	41.089	Felis_catus
ENSDARG00000005772	tsr2	98	52.101	ENSFDAG00000011554	TSR2	99	43.548	Fukomys_damarensis
ENSDARG00000005772	tsr2	70	67.059	ENSGMOG00000007150	tsr2	96	67.059	Gadus_morhua
ENSDARG00000005772	tsr2	93	58.772	ENSGACG00000000595	tsr2	98	48.023	Gasterosteus_aculeatus
ENSDARG00000005772	tsr2	96	49.573	ENSGAGG00000007629	TSR2	72	48.120	Gopherus_agassizii
ENSDARG00000005772	tsr2	98	52.101	ENSGGOG00000041368	TSR2	100	43.979	Gorilla_gorilla
ENSDARG00000005772	tsr2	95	66.379	ENSHBUG00000020989	tsr2	79	58.427	Haplochromis_burtoni
ENSDARG00000005772	tsr2	98	52.101	ENSHGLG00000002188	TSR2	99	41.117	Heterocephalus_glaber_female
ENSDARG00000005772	tsr2	98	52.101	ENSHGLG00100001234	TSR2	99	41.117	Heterocephalus_glaber_male
ENSDARG00000005772	tsr2	95	59.483	ENSHCOG00000017585	-	61	56.250	Hippocampus_comes
ENSDARG00000005772	tsr2	99	81.818	ENSIPUG00000012170	tsr2	100	68.557	Ictalurus_punctatus
ENSDARG00000005772	tsr2	98	55.462	ENSSTOG00000033612	TSR2	99	45.026	Ictidomys_tridecemlineatus
ENSDARG00000005772	tsr2	98	51.261	ENSJJAG00000004561	Tsr2	99	43.814	Jaculus_jaculus
ENSDARG00000005772	tsr2	95	62.931	ENSKMAG00000012611	-	98	52.198	Kryptolebias_marmoratus
ENSDARG00000005772	tsr2	94	64.348	ENSLBEG00000017316	tsr2	53	60.156	Labrus_bergylta
ENSDARG00000005772	tsr2	98	56.303	ENSLAFG00000018093	TSR2	99	47.917	Loxodonta_africana
ENSDARG00000005772	tsr2	98	52.101	ENSMFAG00000001364	TSR2	100	44.503	Macaca_fascicularis
ENSDARG00000005772	tsr2	98	52.101	ENSMMUG00000012612	TSR2	100	44.503	Macaca_mulatta
ENSDARG00000005772	tsr2	98	49.580	ENSMMUG00000010044	-	100	41.237	Macaca_mulatta
ENSDARG00000005772	tsr2	98	52.101	ENSMNEG00000041996	TSR2	100	44.503	Macaca_nemestrina
ENSDARG00000005772	tsr2	98	52.101	ENSMLEG00000032632	TSR2	100	44.503	Mandrillus_leucophaeus
ENSDARG00000005772	tsr2	93	64.035	ENSMAMG00000011540	tsr2	98	57.865	Mastacembelus_armatus
ENSDARG00000005772	tsr2	95	66.379	ENSMZEG00005026752	tsr2	98	57.542	Maylandia_zebra
ENSDARG00000005772	tsr2	98	52.101	ENSMAUG00000012389	Tsr2	99	41.117	Mesocricetus_auratus
ENSDARG00000005772	tsr2	98	54.622	ENSMICG00000010116	TSR2	99	42.079	Microcebus_murinus
ENSDARG00000005772	tsr2	99	50.413	ENSMOCG00000006662	Tsr2	99	41.089	Microtus_ochrogaster
ENSDARG00000005772	tsr2	98	47.191	ENSMMOG00000009751	-	98	47.191	Mola_mola
ENSDARG00000005772	tsr2	96	38.251	ENSMODG00000020894	-	100	37.895	Monodelphis_domestica
ENSDARG00000005772	tsr2	93	62.281	ENSMALG00000014552	tsr2	98	53.371	Monopterus_albus
ENSDARG00000005772	tsr2	98	52.941	MGP_CAROLIEiJ_G0033491	Tsr2	99	42.132	Mus_caroli
ENSDARG00000005772	tsr2	98	52.941	ENSMUSG00000025264	Tsr2	99	41.624	Mus_musculus
ENSDARG00000005772	tsr2	98	52.101	MGP_PahariEiJ_G0032030	Tsr2	99	41.624	Mus_pahari
ENSDARG00000005772	tsr2	98	52.941	MGP_SPRETEiJ_G0034661	Tsr2	99	41.624	Mus_spretus
ENSDARG00000005772	tsr2	99	53.719	ENSMPUG00000011436	TSR2	100	47.090	Mustela_putorius_furo
ENSDARG00000005772	tsr2	97	52.101	ENSMLUG00000010613	TSR2	99	44.444	Myotis_lucifugus
ENSDARG00000005772	tsr2	98	53.782	ENSNGAG00000021351	Tsr2	99	46.597	Nannospalax_galili
ENSDARG00000005772	tsr2	94	65.217	ENSNBRG00000007965	tsr2	98	58.192	Neolamprologus_brichardi
ENSDARG00000005772	tsr2	98	52.101	ENSNLEG00000030041	TSR2	100	43.455	Nomascus_leucogenys
ENSDARG00000005772	tsr2	75	47.826	ENSMEUG00000000188	-	100	37.419	Notamacropus_eugenii
ENSDARG00000005772	tsr2	75	48.913	ENSMEUG00000006729	-	82	46.667	Notamacropus_eugenii
ENSDARG00000005772	tsr2	81	52.525	ENSOPRG00000016595	TSR2	87	49.123	Ochotona_princeps
ENSDARG00000005772	tsr2	89	55.046	ENSODEG00000014931	-	98	42.246	Octodon_degus
ENSDARG00000005772	tsr2	98	53.782	ENSODEG00000000542	-	99	45.503	Octodon_degus
ENSDARG00000005772	tsr2	86	52.381	ENSODEG00000019951	-	99	39.560	Octodon_degus
ENSDARG00000005772	tsr2	95	66.379	ENSONIG00000000763	tsr2	98	60.112	Oreochromis_niloticus
ENSDARG00000005772	tsr2	97	56.780	ENSOANG00000000707	TSR2	84	56.780	Ornithorhynchus_anatinus
ENSDARG00000005772	tsr2	76	56.383	ENSOCUG00000014714	-	100	43.713	Oryctolagus_cuniculus
ENSDARG00000005772	tsr2	98	55.462	ENSOCUG00000027678	-	100	45.596	Oryctolagus_cuniculus
ENSDARG00000005772	tsr2	95	59.483	ENSORLG00000022662	tsr2	98	50.000	Oryzias_latipes
ENSDARG00000005772	tsr2	95	59.483	ENSORLG00020003033	tsr2	98	48.876	Oryzias_latipes_hni
ENSDARG00000005772	tsr2	95	59.483	ENSORLG00015017253	tsr2	98	46.995	Oryzias_latipes_hsok
ENSDARG00000005772	tsr2	95	58.621	ENSOMEG00000013975	-	98	50.000	Oryzias_melastigma
ENSDARG00000005772	tsr2	95	58.621	ENSOMEG00000011483	tsr2	98	50.562	Oryzias_melastigma
ENSDARG00000005772	tsr2	98	51.261	ENSOGAG00000003468	TSR2	100	42.268	Otolemur_garnettii
ENSDARG00000005772	tsr2	98	55.462	ENSOARG00000006467	-	99	47.120	Ovis_aries
ENSDARG00000005772	tsr2	89	46.789	ENSOARG00000009487	-	63	46.789	Ovis_aries
ENSDARG00000005772	tsr2	98	52.101	ENSPPAG00000021242	TSR2	100	43.979	Pan_paniscus
ENSDARG00000005772	tsr2	98	53.782	ENSPPRG00000001337	TSR2	100	41.089	Panthera_pardus
ENSDARG00000005772	tsr2	98	52.941	ENSPTIG00000007138	TSR2	99	40.594	Panthera_tigris_altaica
ENSDARG00000005772	tsr2	98	52.101	ENSPTRG00000045904	TSR2	100	43.979	Pan_troglodytes
ENSDARG00000005772	tsr2	89	53.211	ENSPANG00000002291	-	98	44.751	Papio_anubis
ENSDARG00000005772	tsr2	98	52.101	ENSPANG00000008042	-	100	44.503	Papio_anubis
ENSDARG00000005772	tsr2	94	73.913	ENSPKIG00000023676	tsr2	97	62.162	Paramormyrops_kingsleyae
ENSDARG00000005772	tsr2	76	70.968	ENSPMGG00000002963	tsr2	100	45.989	Periophthalmus_magnuspinnatus
ENSDARG00000005772	tsr2	98	52.941	ENSPEMG00000015713	Tsr2	99	43.299	Peromyscus_maniculatus_bairdii
ENSDARG00000005772	tsr2	89	53.704	ENSPMAG00000001705	tsr2	92	43.243	Petromyzon_marinus
ENSDARG00000005772	tsr2	98	47.899	ENSPCIG00000024314	-	95	37.688	Phascolarctos_cinereus
ENSDARG00000005772	tsr2	95	61.667	ENSPFOG00000011824	tsr2	98	53.846	Poecilia_formosa
ENSDARG00000005772	tsr2	95	62.931	ENSPLAG00000023520	tsr2	98	54.494	Poecilia_latipinna
ENSDARG00000005772	tsr2	95	62.931	ENSPMEG00000000360	tsr2	98	52.809	Poecilia_mexicana
ENSDARG00000005772	tsr2	95	62.931	ENSPREG00000013009	tsr2	98	54.494	Poecilia_reticulata
ENSDARG00000005772	tsr2	98	52.101	ENSPPYG00000020381	-	72	43.979	Pongo_abelii
ENSDARG00000005772	tsr2	98	54.622	ENSPCOG00000002354	TSR2	100	42.079	Propithecus_coquereli
ENSDARG00000005772	tsr2	78	53.684	ENSPVAG00000000034	TSR2	79	53.684	Pteropus_vampyrus
ENSDARG00000005772	tsr2	95	66.379	ENSPNYG00000019995	tsr2	79	58.427	Pundamilia_nyererei
ENSDARG00000005772	tsr2	99	73.554	ENSPNAG00000024167	tsr2	100	65.426	Pygocentrus_nattereri
ENSDARG00000005772	tsr2	98	52.101	ENSRNOG00000002556	NEWGENE_1562416	99	43.299	Rattus_norvegicus
ENSDARG00000005772	tsr2	98	45.378	ENSRBIG00000003999	-	89	38.144	Rhinopithecus_bieti
ENSDARG00000005772	tsr2	98	52.101	ENSRBIG00000024521	-	100	44.503	Rhinopithecus_bieti
ENSDARG00000005772	tsr2	98	45.378	ENSRROG00000033469	-	92	38.660	Rhinopithecus_roxellana
ENSDARG00000005772	tsr2	98	52.101	ENSRROG00000029439	-	100	44.503	Rhinopithecus_roxellana
ENSDARG00000005772	tsr2	98	52.941	ENSSBOG00000019737	TSR2	100	43.979	Saimiri_boliviensis_boliviensis
ENSDARG00000005772	tsr2	86	41.566	ENSSHAG00000004824	-	99	40.120	Sarcophilus_harrisii
ENSDARG00000005772	tsr2	99	71.074	ENSSFOG00015002207	tsr2	99	58.947	Scleropages_formosus
ENSDARG00000005772	tsr2	95	63.793	ENSSMAG00000012882	tsr2	98	55.056	Scophthalmus_maximus
ENSDARG00000005772	tsr2	95	64.655	ENSSDUG00000019445	tsr2	98	54.494	Seriola_dumerili
ENSDARG00000005772	tsr2	95	64.655	ENSSLDG00000005598	tsr2	98	53.933	Seriola_lalandi_dorsalis
ENSDARG00000005772	tsr2	98	58.824	ENSSPUG00000019286	TSR2	99	48.649	Sphenodon_punctatus
ENSDARG00000005772	tsr2	98	51.261	ENSSSCG00000012334	TSR2	100	43.005	Sus_scrofa
ENSDARG00000005772	tsr2	93	60.526	ENSTRUG00000008947	tsr2	98	52.247	Takifugu_rubripes
ENSDARG00000005772	tsr2	82	58.000	ENSTNIG00000002173	-	100	48.780	Tetraodon_nigroviridis
ENSDARG00000005772	tsr2	98	51.261	ENSTBEG00000016242	TSR2	89	48.507	Tupaia_belangeri
ENSDARG00000005772	tsr2	100	34.737	ENSTTRG00000003274	TSR2	100	33.505	Tursiops_truncatus
ENSDARG00000005772	tsr2	98	53.782	ENSUAMG00000009605	TSR2	100	46.154	Ursus_americanus
ENSDARG00000005772	tsr2	98	53.782	ENSUMAG00000019189	TSR2	100	46.154	Ursus_maritimus
ENSDARG00000005772	tsr2	89	46.296	ENSVPAG00000007532	TSR2	100	38.333	Vicugna_pacos
ENSDARG00000005772	tsr2	98	51.261	ENSVVUG00000002247	TSR2	99	42.051	Vulpes_vulpes
ENSDARG00000005772	tsr2	98	59.664	ENSXETG00000033574	TSR2	99	53.158	Xenopus_tropicalis
ENSDARG00000005772	tsr2	95	62.069	ENSXMAG00000024827	tsr2	89	53.933	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0006364	rRNA processing	-	IEA	Process