EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000006434 (Gene tree)
Gene ID: 553733
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10916 bases
Position: chr1:19637312-19648227
Accession: ZDB-GENE-050522-251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000054573	RNA_pol_I_A49	PF06870.12	1.1e-104	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000147274	-	726	-	-	- (aa)	-	-
ENSDART00000146688	-	918	-	-	- (aa)	-	-
ENSDART00000054574	-	1399	-	ENSDARP00000054573	413 (aa)	-	Q501W9
ENSDART00000141660	-	936	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000006434's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000006434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000006434	polr1e	97	42.579	ENSG00000137054	POLR1E	94	43.073	Homo_sapiens
ENSDARG00000006434	polr1e	100	54.306	ENSAPOG00000012452	polr1e	97	54.187	Acanthochromis_polyacanthus
ENSDARG00000006434	polr1e	99	40.693	ENSAMEG00000010193	POLR1E	91	41.480	Ailuropoda_melanoleuca
ENSDARG00000006434	polr1e	100	52.518	ENSACIG00000009884	polr1e	96	55.789	Amphilophus_citrinellus
ENSDARG00000006434	polr1e	100	58.612	ENSAOCG00000005665	polr1e	97	58.621	Amphiprion_ocellaris
ENSDARG00000006434	polr1e	100	58.852	ENSAPEG00000020581	polr1e	97	58.867	Amphiprion_percula
ENSDARG00000006434	polr1e	100	61.244	ENSATEG00000020609	polr1e	97	61.330	Anabas_testudineus
ENSDARG00000006434	polr1e	81	39.119	ENSAPLG00000010340	POLR1E	79	42.765	Anas_platyrhynchos
ENSDARG00000006434	polr1e	98	42.512	ENSANAG00000038046	POLR1E	95	42.750	Aotus_nancymaae
ENSDARG00000006434	polr1e	100	57.794	ENSACLG00000013685	polr1e	96	57.778	Astatotilapia_calliptera
ENSDARG00000006434	polr1e	99	63.438	ENSAMXG00000018181	polr1e	97	63.184	Astyanax_mexicanus
ENSDARG00000006434	polr1e	97	45.499	ENSBTAG00000012243	POLR1E	94	46.096	Bos_taurus
ENSDARG00000006434	polr1e	95	40.351	ENSCJAG00000010512	POLR1E	93	42.627	Callithrix_jacchus
ENSDARG00000006434	polr1e	98	43.689	ENSCAFG00000002377	POLR1E	94	44.836	Canis_familiaris
ENSDARG00000006434	polr1e	98	43.932	ENSCAFG00020017851	POLR1E	94	45.088	Canis_lupus_dingo
ENSDARG00000006434	polr1e	98	44.903	ENSCHIG00000019479	POLR1E	94	45.844	Capra_hircus
ENSDARG00000006434	polr1e	98	42.961	ENSTSYG00000002075	POLR1E	94	43.829	Carlito_syrichta
ENSDARG00000006434	polr1e	70	43.493	ENSCAPG00000015653	POLR1E	94	44.203	Cavia_aperea
ENSDARG00000006434	polr1e	98	44.175	ENSCPOG00000009965	POLR1E	94	44.836	Cavia_porcellus
ENSDARG00000006434	polr1e	99	38.554	ENSCCAG00000029460	POLR1E	94	39.500	Cebus_capucinus
ENSDARG00000006434	polr1e	97	42.579	ENSCATG00000031732	POLR1E	94	43.073	Cercocebus_atys
ENSDARG00000006434	polr1e	86	45.455	ENSCLAG00000012701	POLR1E	95	45.455	Chinchilla_lanigera
ENSDARG00000006434	polr1e	97	42.579	ENSCSAG00000010782	POLR1E	94	43.073	Chlorocebus_sabaeus
ENSDARG00000006434	polr1e	95	38.095	ENSCHOG00000013024	POLR1E	79	38.903	Choloepus_hoffmanni
ENSDARG00000006434	polr1e	99	43.645	ENSCPBG00000006923	POLR1E	97	44.444	Chrysemys_picta_bellii
ENSDARG00000006434	polr1e	97	42.336	ENSCANG00000036112	POLR1E	94	42.821	Colobus_angolensis_palliatus
ENSDARG00000006434	polr1e	99	43.584	ENSCGRG00001006197	Polr1e	91	43.750	Cricetulus_griseus_chok1gshd
ENSDARG00000006434	polr1e	99	43.099	ENSCGRG00000006430	Polr1e	91	43.250	Cricetulus_griseus_crigri
ENSDARG00000006434	polr1e	99	54.854	ENSCSEG00000005121	polr1e	97	54.863	Cynoglossus_semilaevis
ENSDARG00000006434	polr1e	100	56.386	ENSCVAG00000019759	polr1e	97	56.576	Cyprinodon_variegatus
ENSDARG00000006434	polr1e	99	38.298	ENSDNOG00000010257	POLR1E	96	36.703	Dasypus_novemcinctus
ENSDARG00000006434	polr1e	83	43.064	ENSETEG00000018204	POLR1E	96	43.353	Echinops_telfairi
ENSDARG00000006434	polr1e	59	44.961	ENSEBUG00000010635	-	80	44.961	Eptatretus_burgeri
ENSDARG00000006434	polr1e	98	44.903	ENSEASG00005000675	POLR1E	94	45.844	Equus_asinus_asinus
ENSDARG00000006434	polr1e	98	44.660	ENSECAG00000014669	POLR1E	94	45.592	Equus_caballus
ENSDARG00000006434	polr1e	95	38.791	ENSEEUG00000011928	POLR1E	80	39.164	Erinaceus_europaeus
ENSDARG00000006434	polr1e	99	56.145	ENSELUG00000008150	polr1e	96	56.436	Esox_lucius
ENSDARG00000006434	polr1e	99	44.952	ENSFCAG00000013081	POLR1E	95	45.885	Felis_catus
ENSDARG00000006434	polr1e	95	42.356	ENSFALG00000012950	POLR1E	95	43.081	Ficedula_albicollis
ENSDARG00000006434	polr1e	98	43.689	ENSFDAG00000016917	POLR1E	94	44.332	Fukomys_damarensis
ENSDARG00000006434	polr1e	100	56.490	ENSFHEG00000009801	polr1e	97	56.931	Fundulus_heteroclitus
ENSDARG00000006434	polr1e	100	44.893	ENSGMOG00000003336	POLR1E	96	45.185	Gadus_morhua
ENSDARG00000006434	polr1e	99	41.304	ENSGALG00000005395	POLR1E	96	41.750	Gallus_gallus
ENSDARG00000006434	polr1e	100	54.940	ENSGAFG00000004850	polr1e	97	55.335	Gambusia_affinis
ENSDARG00000006434	polr1e	100	53.938	ENSGACG00000016087	polr1e	97	54.300	Gasterosteus_aculeatus
ENSDARG00000006434	polr1e	96	39.500	ENSGAGG00000001659	POLR1E	96	39.109	Gopherus_agassizii
ENSDARG00000006434	polr1e	99	42.206	ENSGGOG00000001882	POLR1E	95	42.680	Gorilla_gorilla
ENSDARG00000006434	polr1e	100	58.034	ENSHBUG00000002559	polr1e	96	58.025	Haplochromis_burtoni
ENSDARG00000006434	polr1e	98	44.175	ENSHGLG00000002036	POLR1E	94	44.836	Heterocephalus_glaber_female
ENSDARG00000006434	polr1e	98	44.417	ENSHGLG00100012784	POLR1E	94	45.088	Heterocephalus_glaber_male
ENSDARG00000006434	polr1e	100	55.904	ENSHCOG00000002774	polr1e	97	56.079	Hippocampus_comes
ENSDARG00000006434	polr1e	99	61.017	ENSIPUG00000003019	polr1e	97	60.945	Ictalurus_punctatus
ENSDARG00000006434	polr1e	99	43.029	ENSSTOG00000009810	POLR1E	96	44.059	Ictidomys_tridecemlineatus
ENSDARG00000006434	polr1e	98	43.447	ENSJJAG00000020731	Polr1e	91	44.332	Jaculus_jaculus
ENSDARG00000006434	polr1e	100	57.212	ENSKMAG00000000046	polr1e	96	57.855	Kryptolebias_marmoratus
ENSDARG00000006434	polr1e	99	59.277	ENSLBEG00000003104	polr1e	96	59.653	Labrus_bergylta
ENSDARG00000006434	polr1e	86	47.397	ENSLACG00000003416	POLR1E	96	47.740	Latimeria_chalumnae
ENSDARG00000006434	polr1e	99	52.038	ENSLOCG00000012859	polr1e	96	51.478	Lepisosteus_oculatus
ENSDARG00000006434	polr1e	98	44.903	ENSLAFG00000012831	POLR1E	93	45.844	Loxodonta_africana
ENSDARG00000006434	polr1e	97	42.579	ENSMFAG00000045465	POLR1E	92	43.689	Macaca_fascicularis
ENSDARG00000006434	polr1e	97	42.579	ENSMMUG00000017892	POLR1E	94	43.073	Macaca_mulatta
ENSDARG00000006434	polr1e	97	39.905	ENSMNEG00000040283	POLR1E	94	40.295	Macaca_nemestrina
ENSDARG00000006434	polr1e	97	42.579	ENSMLEG00000031135	POLR1E	94	43.073	Mandrillus_leucophaeus
ENSDARG00000006434	polr1e	99	58.795	ENSMAMG00000001260	polr1e	96	58.168	Mastacembelus_armatus
ENSDARG00000006434	polr1e	100	58.034	ENSMZEG00005021536	polr1e	96	58.025	Maylandia_zebra
ENSDARG00000006434	polr1e	98	43.447	ENSMAUG00000021044	Polr1e	91	43.750	Mesocricetus_auratus
ENSDARG00000006434	polr1e	98	45.388	ENSMICG00000003673	POLR1E	94	46.348	Microcebus_murinus
ENSDARG00000006434	polr1e	99	43.099	ENSMOCG00000012920	Polr1e	91	43.577	Microtus_ochrogaster
ENSDARG00000006434	polr1e	100	60.096	ENSMMOG00000007391	polr1e	97	60.396	Mola_mola
ENSDARG00000006434	polr1e	98	43.447	ENSMODG00000002884	POLR1E	98	43.921	Monodelphis_domestica
ENSDARG00000006434	polr1e	100	58.654	ENSMALG00000002665	polr1e	96	58.911	Monopterus_albus
ENSDARG00000006434	polr1e	99	42.651	MGP_CAROLIEiJ_G0025967	Polr1e	94	44.010	Mus_caroli
ENSDARG00000006434	polr1e	99	43.269	ENSMUSG00000028318	Polr1e	94	44.935	Mus_musculus
ENSDARG00000006434	polr1e	99	43.373	MGP_PahariEiJ_G0024114	Polr1e	94	44.935	Mus_pahari
ENSDARG00000006434	polr1e	99	43.826	MGP_SPRETEiJ_G0026930	Polr1e	94	44.935	Mus_spretus
ENSDARG00000006434	polr1e	98	40.476	ENSMPUG00000006040	POLR1E	94	39.062	Mustela_putorius_furo
ENSDARG00000006434	polr1e	99	45.060	ENSMLUG00000012688	POLR1E	91	46.000	Myotis_lucifugus
ENSDARG00000006434	polr1e	97	45.255	ENSNGAG00000002520	Polr1e	91	45.592	Nannospalax_galili
ENSDARG00000006434	polr1e	100	58.273	ENSNBRG00000016822	polr1e	96	58.272	Neolamprologus_brichardi
ENSDARG00000006434	polr1e	98	42.271	ENSNLEG00000003616	POLR1E	95	42.750	Nomascus_leucogenys
ENSDARG00000006434	polr1e	74	47.768	ENSMEUG00000015372	-	79	48.198	Notamacropus_eugenii
ENSDARG00000006434	polr1e	87	40.055	ENSOPRG00000014206	POLR1E	95	40.751	Ochotona_princeps
ENSDARG00000006434	polr1e	99	44.337	ENSODEG00000014565	POLR1E	92	45.000	Octodon_degus
ENSDARG00000006434	polr1e	100	58.753	ENSONIG00000008921	polr1e	96	58.765	Oreochromis_niloticus
ENSDARG00000006434	polr1e	99	43.373	ENSOCUG00000024773	POLR1E	95	44.250	Oryctolagus_cuniculus
ENSDARG00000006434	polr1e	100	56.250	ENSORLG00000005143	polr1e	97	56.436	Oryzias_latipes
ENSDARG00000006434	polr1e	95	53.690	ENSORLG00020007271	polr1e	96	54.960	Oryzias_latipes_hni
ENSDARG00000006434	polr1e	100	56.250	ENSORLG00015000137	polr1e	97	56.436	Oryzias_latipes_hsok
ENSDARG00000006434	polr1e	100	54.327	ENSOMEG00000013264	polr1e	95	54.455	Oryzias_melastigma
ENSDARG00000006434	polr1e	98	44.903	ENSOGAG00000012981	POLR1E	92	45.844	Otolemur_garnettii
ENSDARG00000006434	polr1e	98	44.903	ENSOARG00000011465	POLR1E	91	45.844	Ovis_aries
ENSDARG00000006434	polr1e	97	42.579	ENSPPAG00000034566	POLR1E	94	43.073	Pan_paniscus
ENSDARG00000006434	polr1e	99	44.952	ENSPPRG00000005649	POLR1E	95	45.885	Panthera_pardus
ENSDARG00000006434	polr1e	99	44.952	ENSPTIG00000009774	POLR1E	95	45.885	Panthera_tigris_altaica
ENSDARG00000006434	polr1e	97	42.579	ENSPTRG00000020944	POLR1E	94	43.073	Pan_troglodytes
ENSDARG00000006434	polr1e	97	42.579	ENSPANG00000025563	POLR1E	94	43.073	Papio_anubis
ENSDARG00000006434	polr1e	99	53.222	ENSPKIG00000003562	polr1e	97	53.676	Paramormyrops_kingsleyae
ENSDARG00000006434	polr1e	95	45.960	ENSPSIG00000003274	POLR1E	89	46.875	Pelodiscus_sinensis
ENSDARG00000006434	polr1e	96	54.684	ENSPMGG00000024169	polr1e	93	54.688	Periophthalmus_magnuspinnatus
ENSDARG00000006434	polr1e	99	43.584	ENSPEMG00000019151	-	91	43.750	Peromyscus_maniculatus_bairdii
ENSDARG00000006434	polr1e	99	36.010	ENSPEMG00000022300	-	90	36.203	Peromyscus_maniculatus_bairdii
ENSDARG00000006434	polr1e	98	44.010	ENSPCIG00000014798	POLR1E	98	44.169	Phascolarctos_cinereus
ENSDARG00000006434	polr1e	100	53.288	ENSPFOG00000019627	polr1e	96	53.380	Poecilia_formosa
ENSDARG00000006434	polr1e	100	56.386	ENSPLAG00000022679	polr1e	97	56.576	Poecilia_latipinna
ENSDARG00000006434	polr1e	87	56.825	ENSPMEG00000022123	polr1e	90	57.061	Poecilia_mexicana
ENSDARG00000006434	polr1e	100	55.181	ENSPREG00000009470	polr1e	97	55.583	Poecilia_reticulata
ENSDARG00000006434	polr1e	97	42.439	ENSPPYG00000019061	POLR1E	94	42.929	Pongo_abelii
ENSDARG00000006434	polr1e	55	39.912	ENSPCAG00000004891	POLR1E	69	41.509	Procavia_capensis
ENSDARG00000006434	polr1e	98	44.417	ENSPCOG00000027448	POLR1E	94	45.340	Propithecus_coquereli
ENSDARG00000006434	polr1e	95	45.088	ENSPVAG00000007940	POLR1E	80	46.335	Pteropus_vampyrus
ENSDARG00000006434	polr1e	100	58.034	ENSPNYG00000001032	polr1e	96	58.025	Pundamilia_nyererei
ENSDARG00000006434	polr1e	99	62.319	ENSPNAG00000006987	polr1e	97	62.531	Pygocentrus_nattereri
ENSDARG00000006434	polr1e	99	42.131	ENSRNOG00000012664	Polr1e	91	42.500	Rattus_norvegicus
ENSDARG00000006434	polr1e	95	43.108	ENSRBIG00000034214	POLR1E	95	44.142	Rhinopithecus_bieti
ENSDARG00000006434	polr1e	97	42.336	ENSRROG00000031986	POLR1E	94	42.821	Rhinopithecus_roxellana
ENSDARG00000006434	polr1e	97	42.579	ENSSBOG00000021415	POLR1E	94	43.073	Saimiri_boliviensis_boliviensis
ENSDARG00000006434	polr1e	87	45.580	ENSSHAG00000016084	POLR1E	95	46.821	Sarcophilus_harrisii
ENSDARG00000006434	polr1e	99	53.477	ENSSFOG00015002293	polr1e	97	53.695	Scleropages_formosus
ENSDARG00000006434	polr1e	99	57.971	ENSSMAG00000011672	polr1e	90	57.816	Scophthalmus_maximus
ENSDARG00000006434	polr1e	100	57.452	ENSSDUG00000022279	polr1e	96	57.673	Seriola_dumerili
ENSDARG00000006434	polr1e	100	57.452	ENSSLDG00000024918	polr1e	96	57.673	Seriola_lalandi_dorsalis
ENSDARG00000006434	polr1e	56	40.773	ENSSARG00000009810	-	58	41.631	Sorex_araneus
ENSDARG00000006434	polr1e	100	43.095	ENSSPUG00000009499	POLR1E	97	42.857	Sphenodon_punctatus
ENSDARG00000006434	polr1e	100	61.298	ENSSPAG00000021240	polr1e	97	61.634	Stegastes_partitus
ENSDARG00000006434	polr1e	99	43.341	ENSSSCG00000005347	POLR1E	94	44.081	Sus_scrofa
ENSDARG00000006434	polr1e	96	37.946	ENSTGUG00000007169	POLR1E	96	38.194	Taeniopygia_guttata
ENSDARG00000006434	polr1e	99	54.762	ENSTRUG00000020779	polr1e	97	55.257	Takifugu_rubripes
ENSDARG00000006434	polr1e	99	55.635	ENSTNIG00000017812	polr1e	97	56.158	Tetraodon_nigroviridis
ENSDARG00000006434	polr1e	95	45.477	ENSTBEG00000013786	POLR1E	81	46.094	Tupaia_belangeri
ENSDARG00000006434	polr1e	94	44.389	ENSTTRG00000008294	POLR1E	81	44.961	Tursiops_truncatus
ENSDARG00000006434	polr1e	98	45.301	ENSUAMG00000012474	POLR1E	97	47.075	Ursus_americanus
ENSDARG00000006434	polr1e	98	45.301	ENSUMAG00000011496	POLR1E	94	46.250	Ursus_maritimus
ENSDARG00000006434	polr1e	82	43.275	ENSVPAG00000009048	POLR1E	81	43.275	Vicugna_pacos
ENSDARG00000006434	polr1e	99	43.855	ENSVVUG00000019954	POLR1E	95	45.000	Vulpes_vulpes
ENSDARG00000006434	polr1e	99	40.238	ENSXETG00000006533	polr1e	97	40.686	Xenopus_tropicalis
ENSDARG00000006434	polr1e	100	53.976	ENSXCOG00000013706	polr1e	97	55.198	Xiphophorus_couchianus
ENSDARG00000006434	polr1e	100	56.386	ENSXMAG00000012484	polr1e	97	56.824	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process