EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000006553 (Gene tree)
Gene ID: 449660
Gene Symbol: rras
Alias: fb23a02|wu:fb23a02|wu:fj98h09|zgc:92588
Full Name: RAS related
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5376 bases
Position: chr3:32410746-32416121
Accession: ZDB-GENE-041010-217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000014099	GTP_EFTU	PF00009.27	1.9e-06	1	1
ENSDARP00000147347	GTP_EFTU	PF00009.27	1.9e-06	1	1
ENSDARP00000121131	GTP_EFTU	PF00009.27	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000141919	-	716	-	-	- (aa)	-	-
ENSDART00000186287	-	598	-	ENSDARP00000147347	196 (aa)	-	Q4V9D8
ENSDART00000141793	-	571	-	ENSDARP00000121131	189 (aa)	-	F1R5E5
ENSDART00000139392	-	855	-	-	- (aa)	-	-
ENSDART00000025496	-	2510	-	ENSDARP00000014099	196 (aa)	-	Q4V9D8

Gene Model

Click here to download ENSDARG00000006553's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04010	MAPK signaling pathway	KEGG
dre04137	Mitophagy - animal	KEGG
dre04140	Autophagy - animal	KEGG
dre04218	Cellular senescence	KEGG
dre04371	Apelin signaling pathway	KEGG
dre04625	C-type lectin receptor signaling pathway	KEGG
dre04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000006553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000006553	rras	83	34.146	ENSDARG00000019312	rab39ba	88	32.275
ENSDARG00000006553	rras	85	33.918	ENSDARG00000026098	si:dkey-13a21.4	76	33.333
ENSDARG00000006553	rras	83	32.515	ENSDARG00000031343	rab6bb	78	32.515
ENSDARG00000006553	rras	82	33.333	ENSDARG00000114797	rab3b	74	33.742
ENSDARG00000006553	rras	83	34.146	ENSDARG00000052954	rab25b	72	32.895
ENSDARG00000006553	rras	82	34.104	ENSDARG00000046013	rasl11a	64	32.716
ENSDARG00000006553	rras	81	31.875	ENSDARG00000102078	CABZ01072548.1	81	31.875
ENSDARG00000006553	rras	68	32.353	ENSDARG00000018107	rab3da	80	32.353
ENSDARG00000006553	rras	96	30.964	ENSDARG00000098344	rab18b	90	30.108
ENSDARG00000006553	rras	95	34.536	ENSDARG00000056479	rab1bb	96	34.536
ENSDARG00000006553	rras	63	33.607	ENSDARG00000102580	CU571310.1	58	33.607
ENSDARG00000006553	rras	96	31.034	ENSDARG00000029885	rab41	93	31.034
ENSDARG00000006553	rras	90	33.149	ENSDARG00000103391	rab9b	81	31.765
ENSDARG00000006553	rras	84	34.545	ENSDARG00000041450	rab11a	71	33.333
ENSDARG00000006553	rras	96	34.010	ENSDARG00000055291	rab18a	90	33.333
ENSDARG00000006553	rras	89	34.078	ENSDARG00000045027	rab9a	83	32.738
ENSDARG00000006553	rras	96	54.737	ENSDARG00000098497	hrasa	98	54.737
ENSDARG00000006553	rras	94	34.197	ENSDARG00000052263	rab1aa	96	35.052
ENSDARG00000006553	rras	87	35.429	ENSDARG00000089428	rab12	68	34.161
ENSDARG00000006553	rras	82	34.568	ENSDARG00000103934	megf8	93	35.583
ENSDARG00000006553	rras	79	35.256	ENSDARG00000058425	rab35b	84	30.233
ENSDARG00000006553	rras	84	31.765	ENSDARG00000037967	si:dkey-16l2.16	82	31.633
ENSDARG00000006553	rras	83	35.366	ENSDARG00000058800	rab25a	72	34.868
ENSDARG00000006553	rras	96	55.026	ENSDARG00000005651	hrasb	98	61.972
ENSDARG00000006553	rras	83	35.758	ENSDARG00000100379	si:dkey-34d22.2	63	40.678
ENSDARG00000006553	rras	83	61.585	ENSDARG00000062865	mras	92	54.971
ENSDARG00000006553	rras	94	33.668	ENSDARG00000029663	rab1ab	96	34.500
ENSDARG00000006553	rras	84	35.152	ENSDARG00000090086	rab11bb	70	33.987
ENSDARG00000006553	rras	96	30.964	ENSDARG00000034522	rab6ba	94	30.964
ENSDARG00000006553	rras	95	30.769	ENSDARG00000087243	zgc:100918	81	30.723
ENSDARG00000006553	rras	97	34.872	ENSDARG00000034771	rab13	96	34.872
ENSDARG00000006553	rras	84	32.727	ENSDARG00000014340	rab11al	70	31.373
ENSDARG00000006553	rras	88	37.356	ENSDARG00000020261	rab2a	91	32.990
ENSDARG00000006553	rras	97	55.497	ENSDARG00000013161	zgc:55558	98	55.497
ENSDARG00000006553	rras	97	54.211	ENSDARG00000038225	nras	98	54.211
ENSDARG00000006553	rras	95	34.536	ENSDARG00000058044	rab1ba	98	35.385
ENSDARG00000006553	rras	83	34.756	ENSDARG00000033056	zgc:171927	78	35.758
ENSDARG00000006553	rras	95	35.829	ENSDARG00000074246	rab14	81	35.429
ENSDARG00000006553	rras	96	30.542	ENSDARG00000103714	rab6a	94	30.542
ENSDARG00000006553	rras	83	31.707	ENSDARG00000034215	rab42a	71	32.450
ENSDARG00000006553	rras	83	33.537	ENSDARG00000036501	rab39bb	88	31.746
ENSDARG00000006553	rras	95	32.161	ENSDARG00000020497	rab7a	90	31.383
ENSDARG00000006553	rras	87	34.857	ENSDARG00000041878	rab11ba	79	33.742
ENSDARG00000006553	rras	83	30.488	ENSDARG00000015807	rab22a	82	30.435
ENSDARG00000006553	rras	83	61.963	ENSDARG00000010844	kras	98	55.789
ENSDARG00000006553	rras	99	67.692	ENSDARG00000036252	rras2	97	67.692
ENSDARG00000006553	rras	82	30.539	ENSDARG00000026484	rab15	59	30.303
ENSDARG00000006553	rras	87	31.214	ENSDARG00000004151	rab23	72	31.214
ENSDARG00000006553	rras	95	35.829	ENSDARG00000035188	rab14l	81	35.429
ENSDARG00000006553	rras	83	60.366	ENSDARG00000075285	si:ch73-116o1.2	79	60.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000006553	rras	98	86.010	ENSACIG00000017824	rras	98	86.010	Amphilophus_citrinellus
ENSDARG00000006553	rras	98	87.565	ENSAOCG00000012766	rras	98	87.565	Amphiprion_ocellaris
ENSDARG00000006553	rras	98	87.047	ENSAPEG00000002251	rras	98	87.047	Amphiprion_percula
ENSDARG00000006553	rras	98	87.047	ENSATEG00000008400	rras	98	87.047	Anabas_testudineus
ENSDARG00000006553	rras	98	87.047	ENSACLG00000011249	rras	98	87.047	Astatotilapia_calliptera
ENSDARG00000006553	rras	99	91.282	ENSAMXG00000010334	rras	96	91.282	Astyanax_mexicanus
ENSDARG00000006553	rras	98	87.047	ENSCSEG00000011820	rras	98	87.047	Cynoglossus_semilaevis
ENSDARG00000006553	rras	98	83.938	ENSGAFG00000010541	rras	98	83.938	Gambusia_affinis
ENSDARG00000006553	rras	98	86.010	ENSGACG00000004844	rras	98	86.010	Gasterosteus_aculeatus
ENSDARG00000006553	rras	98	87.047	ENSHBUG00000018763	rras	98	87.047	Haplochromis_burtoni
ENSDARG00000006553	rras	96	90.426	ENSIPUG00000006702	rras	91	91.398	Ictalurus_punctatus
ENSDARG00000006553	rras	98	85.492	ENSKMAG00000020733	rras	98	85.492	Kryptolebias_marmoratus
ENSDARG00000006553	rras	98	86.528	ENSLBEG00000003132	rras	96	86.528	Labrus_bergylta
ENSDARG00000006553	rras	85	81.437	ENSLACG00000017138	RRAS	96	81.437	Latimeria_chalumnae
ENSDARG00000006553	rras	98	88.601	ENSMAMG00000004106	rras	98	88.601	Mastacembelus_armatus
ENSDARG00000006553	rras	98	87.047	ENSMZEG00005022866	rras	98	87.047	Maylandia_zebra
ENSDARG00000006553	rras	84	88.485	ENSMALG00000002696	rras	81	88.485	Monopterus_albus
ENSDARG00000006553	rras	98	86.010	ENSONIG00000007797	rras	95	86.010	Oreochromis_niloticus
ENSDARG00000006553	rras	100	85.204	ENSORLG00000025519	rras	100	85.204	Oryzias_latipes
ENSDARG00000006553	rras	100	85.204	ENSORLG00015010289	rras	100	85.204	Oryzias_latipes_hsok
ENSDARG00000006553	rras	100	83.673	ENSOMEG00000000343	rras	100	83.673	Oryzias_melastigma
ENSDARG00000006553	rras	98	84.456	ENSPFOG00000008890	rras	87	84.456	Poecilia_formosa
ENSDARG00000006553	rras	98	83.938	ENSPLAG00000009163	rras	98	83.938	Poecilia_latipinna
ENSDARG00000006553	rras	98	84.456	ENSPMEG00000000572	rras	98	84.456	Poecilia_mexicana
ENSDARG00000006553	rras	98	83.938	ENSPREG00000006363	rras	98	83.938	Poecilia_reticulata
ENSDARG00000006553	rras	99	86.667	ENSPNAG00000018361	rras	99	86.667	Pygocentrus_nattereri
ENSDARG00000006553	rras	99	84.615	ENSSMAG00000014984	rras	98	85.492	Scophthalmus_maximus
ENSDARG00000006553	rras	98	87.565	ENSSPAG00000004878	rras	98	87.565	Stegastes_partitus
ENSDARG00000006553	rras	98	84.456	ENSXCOG00000007650	rras	98	84.456	Xiphophorus_couchianus
ENSDARG00000006553	rras	98	84.456	ENSXMAG00000025428	rras	98	84.456	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0007165	signal transduction	-	IEA	Process
GO:0007219	Notch signaling pathway	21262462.	IMP	Process
GO:0016020	membrane	-	IEA	Component
GO:0045199	maintenance of epithelial cell apical/basal polarity	21262462.	IMP	Process