EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000006567 (Gene tree)
Gene ID: 445096
Gene Symbol: dus4l
Alias: zgc:92033
Full Name: dihydrouridine synthase 4-like (S. cerevisiae)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4589 bases
Position: chr4:2637947-2642535
Accession: ZDB-GENE-040801-233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000106221	Dus	PF01207.17	9.8e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000130623	-	1190	-	ENSDARP00000106221	307 (aa)	-	Q5RIX6

Gene Model

Click here to download ENSDARG00000006567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000006567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000006567	dus4l	83	36.162	ENSDARG00000089260	dus1l	54	36.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000006567	dus4l	97	70.470	ENSG00000105865	DUS4L	94	70.470	Homo_sapiens
ENSDARG00000006567	dus4l	98	81.126	ENSAPOG00000015063	dus4l	96	81.126	Acanthochromis_polyacanthus
ENSDARG00000006567	dus4l	97	69.799	ENSAMEG00000013535	DUS4L	93	69.799	Ailuropoda_melanoleuca
ENSDARG00000006567	dus4l	98	80.795	ENSACIG00000017392	dus4l	96	80.795	Amphilophus_citrinellus
ENSDARG00000006567	dus4l	98	81.126	ENSAOCG00000007191	dus4l	96	81.126	Amphiprion_ocellaris
ENSDARG00000006567	dus4l	98	81.126	ENSAPEG00000015296	dus4l	96	81.126	Amphiprion_percula
ENSDARG00000006567	dus4l	98	80.464	ENSATEG00000009040	dus4l	96	80.464	Anabas_testudineus
ENSDARG00000006567	dus4l	97	74.582	ENSAPLG00000007641	DUS4L	98	74.582	Anas_platyrhynchos
ENSDARG00000006567	dus4l	98	72.848	ENSACAG00000015202	DUS4L	93	72.848	Anolis_carolinensis
ENSDARG00000006567	dus4l	97	70.470	ENSANAG00000037839	DUS4L	97	70.470	Aotus_nancymaae
ENSDARG00000006567	dus4l	98	80.795	ENSACLG00000021844	dus4l	96	80.795	Astatotilapia_calliptera
ENSDARG00000006567	dus4l	97	83.893	ENSAMXG00000032924	dus4l	99	83.893	Astyanax_mexicanus
ENSDARG00000006567	dus4l	98	68.543	ENSBTAG00000021849	DUS4L	94	68.543	Bos_taurus
ENSDARG00000006567	dus4l	91	51.071	WBGene00016674	C45G9.2	99	51.071	Caenorhabditis_elegans
ENSDARG00000006567	dus4l	97	70.134	ENSCJAG00000016323	DUS4L	94	70.134	Callithrix_jacchus
ENSDARG00000006567	dus4l	97	69.128	ENSCAFG00000003919	DUS4L	94	69.128	Canis_familiaris
ENSDARG00000006567	dus4l	97	69.128	ENSCAFG00020023124	DUS4L	94	69.128	Canis_lupus_dingo
ENSDARG00000006567	dus4l	97	69.128	ENSCHIG00000010888	DUS4L	93	69.128	Capra_hircus
ENSDARG00000006567	dus4l	97	69.128	ENSTSYG00000010065	DUS4L	94	69.128	Carlito_syrichta
ENSDARG00000006567	dus4l	90	54.874	ENSCAPG00000007215	DUS4L	99	54.874	Cavia_aperea
ENSDARG00000006567	dus4l	97	69.799	ENSCPOG00000002384	DUS4L	94	69.799	Cavia_porcellus
ENSDARG00000006567	dus4l	98	69.868	ENSCCAG00000027960	DUS4L	95	69.868	Cebus_capucinus
ENSDARG00000006567	dus4l	97	70.134	ENSCATG00000031611	DUS4L	94	70.134	Cercocebus_atys
ENSDARG00000006567	dus4l	97	69.128	ENSCLAG00000012135	DUS4L	94	69.128	Chinchilla_lanigera
ENSDARG00000006567	dus4l	97	69.799	ENSCSAG00000011370	DUS4L	94	69.799	Chlorocebus_sabaeus
ENSDARG00000006567	dus4l	68	70.335	ENSCHOG00000006848	DUS4L	90	70.335	Choloepus_hoffmanni
ENSDARG00000006567	dus4l	98	72.848	ENSCPBG00000000863	DUS4L	96	72.848	Chrysemys_picta_bellii
ENSDARG00000006567	dus4l	97	54.362	ENSCING00000001869	-	96	54.362	Ciona_intestinalis
ENSDARG00000006567	dus4l	96	57.095	ENSCSAVG00000005308	-	97	57.095	Ciona_savignyi
ENSDARG00000006567	dus4l	97	70.134	ENSCANG00000024456	DUS4L	94	70.134	Colobus_angolensis_palliatus
ENSDARG00000006567	dus4l	97	69.463	ENSCGRG00001014181	Dus4l	94	69.463	Cricetulus_griseus_chok1gshd
ENSDARG00000006567	dus4l	97	69.463	ENSCGRG00000000384	Dus4l	94	69.463	Cricetulus_griseus_crigri
ENSDARG00000006567	dus4l	98	80.464	ENSCSEG00000018179	dus4l	95	80.464	Cynoglossus_semilaevis
ENSDARG00000006567	dus4l	98	80.795	ENSCVAG00000010487	dus4l	95	80.795	Cyprinodon_variegatus
ENSDARG00000006567	dus4l	97	69.799	ENSDNOG00000030725	DUS4L	94	69.799	Dasypus_novemcinctus
ENSDARG00000006567	dus4l	97	68.792	ENSDORG00000010587	Dus4l	94	68.792	Dipodomys_ordii
ENSDARG00000006567	dus4l	94	44.816	FBgn0032750	CG10495	75	44.816	Drosophila_melanogaster
ENSDARG00000006567	dus4l	67	51.707	ENSETEG00000004577	-	90	51.707	Echinops_telfairi
ENSDARG00000006567	dus4l	98	58.278	ENSEBUG00000008924	dus4l	96	58.278	Eptatretus_burgeri
ENSDARG00000006567	dus4l	97	70.134	ENSEASG00005017480	DUS4L	94	70.134	Equus_asinus_asinus
ENSDARG00000006567	dus4l	97	70.805	ENSECAG00000014852	DUS4L	94	70.805	Equus_caballus
ENSDARG00000006567	dus4l	99	80.328	ENSELUG00000017740	dus4l	96	80.328	Esox_lucius
ENSDARG00000006567	dus4l	97	69.128	ENSFCAG00000041439	DUS4L	94	69.128	Felis_catus
ENSDARG00000006567	dus4l	97	75.333	ENSFALG00000010246	DUS4L	94	75.333	Ficedula_albicollis
ENSDARG00000006567	dus4l	97	68.792	ENSFDAG00000010206	DUS4L	94	68.792	Fukomys_damarensis
ENSDARG00000006567	dus4l	98	79.470	ENSFHEG00000020124	dus4l	96	79.470	Fundulus_heteroclitus
ENSDARG00000006567	dus4l	98	77.333	ENSGMOG00000001452	dus4l	97	77.333	Gadus_morhua
ENSDARG00000006567	dus4l	96	74.662	ENSGALG00000023661	DUS4L	93	74.662	Gallus_gallus
ENSDARG00000006567	dus4l	98	79.139	ENSGAFG00000010054	dus4l	96	79.139	Gambusia_affinis
ENSDARG00000006567	dus4l	98	81.728	ENSGACG00000008772	dus4l	95	81.728	Gasterosteus_aculeatus
ENSDARG00000006567	dus4l	97	70.470	ENSGGOG00000003821	DUS4L	94	70.470	Gorilla_gorilla
ENSDARG00000006567	dus4l	98	80.795	ENSHBUG00000015255	dus4l	96	80.795	Haplochromis_burtoni
ENSDARG00000006567	dus4l	97	68.121	ENSHGLG00000018976	DUS4L	94	68.121	Heterocephalus_glaber_female
ENSDARG00000006567	dus4l	97	68.121	ENSHGLG00100002604	DUS4L	94	68.121	Heterocephalus_glaber_male
ENSDARG00000006567	dus4l	99	76.974	ENSHCOG00000015919	dus4l	97	76.974	Hippocampus_comes
ENSDARG00000006567	dus4l	100	80.130	ENSIPUG00000014454	dus4l	100	82.000	Ictalurus_punctatus
ENSDARG00000006567	dus4l	97	70.134	ENSSTOG00000000212	DUS4L	94	70.134	Ictidomys_tridecemlineatus
ENSDARG00000006567	dus4l	97	69.128	ENSJJAG00000013626	Dus4l	97	69.128	Jaculus_jaculus
ENSDARG00000006567	dus4l	99	80.198	ENSKMAG00000013719	dus4l	96	80.198	Kryptolebias_marmoratus
ENSDARG00000006567	dus4l	99	80.528	ENSLBEG00000018142	dus4l	96	80.528	Labrus_bergylta
ENSDARG00000006567	dus4l	71	78.440	ENSLACG00000000451	DUS4L	93	78.440	Latimeria_chalumnae
ENSDARG00000006567	dus4l	99	77.597	ENSLOCG00000015815	dus4l	94	77.597	Lepisosteus_oculatus
ENSDARG00000006567	dus4l	97	69.128	ENSLAFG00000000968	DUS4L	94	69.128	Loxodonta_africana
ENSDARG00000006567	dus4l	97	70.134	ENSMFAG00000003759	DUS4L	94	70.134	Macaca_fascicularis
ENSDARG00000006567	dus4l	97	70.134	ENSMNEG00000040594	DUS4L	94	70.134	Macaca_nemestrina
ENSDARG00000006567	dus4l	97	70.134	ENSMLEG00000037658	DUS4L	94	70.134	Mandrillus_leucophaeus
ENSDARG00000006567	dus4l	98	80.667	ENSMAMG00000007717	dus4l	86	80.667	Mastacembelus_armatus
ENSDARG00000006567	dus4l	91	82.437	ENSMZEG00005014697	dus4l	95	82.143	Maylandia_zebra
ENSDARG00000006567	dus4l	78	74.370	ENSMGAG00000009714	DUS4L	97	74.370	Meleagris_gallopavo
ENSDARG00000006567	dus4l	98	68.667	ENSMAUG00000016651	Dus4l	94	69.128	Mesocricetus_auratus
ENSDARG00000006567	dus4l	97	69.463	ENSMICG00000042944	-	94	69.463	Microcebus_murinus
ENSDARG00000006567	dus4l	97	53.356	ENSMICG00000027213	-	93	53.356	Microcebus_murinus
ENSDARG00000006567	dus4l	97	70.805	ENSMOCG00000019344	Dus4l	94	70.805	Microtus_ochrogaster
ENSDARG00000006567	dus4l	99	74.917	ENSMMOG00000011517	dus4l	96	74.917	Mola_mola
ENSDARG00000006567	dus4l	97	69.463	ENSMODG00000016361	DUS4L	94	69.463	Monodelphis_domestica
ENSDARG00000006567	dus4l	98	81.457	ENSMALG00000002457	dus4l	95	81.457	Monopterus_albus
ENSDARG00000006567	dus4l	97	68.792	MGP_CAROLIEiJ_G0017680	Dus4l	92	68.792	Mus_caroli
ENSDARG00000006567	dus4l	97	69.128	ENSMUSG00000020648	Dus4l	92	69.128	Mus_musculus
ENSDARG00000006567	dus4l	98	68.212	MGP_PahariEiJ_G0029438	Dus4l	93	68.212	Mus_pahari
ENSDARG00000006567	dus4l	97	69.128	MGP_SPRETEiJ_G0018522	Dus4l	92	69.128	Mus_spretus
ENSDARG00000006567	dus4l	97	69.799	ENSMPUG00000018247	DUS4L	97	69.799	Mustela_putorius_furo
ENSDARG00000006567	dus4l	73	68.610	ENSMLUG00000002731	DUS4L	94	68.610	Myotis_lucifugus
ENSDARG00000006567	dus4l	97	68.792	ENSNGAG00000022335	Dus4l	94	68.792	Nannospalax_galili
ENSDARG00000006567	dus4l	98	81.126	ENSNBRG00000013582	dus4l	96	81.126	Neolamprologus_brichardi
ENSDARG00000006567	dus4l	97	70.470	ENSNLEG00000008716	DUS4L	94	70.470	Nomascus_leucogenys
ENSDARG00000006567	dus4l	64	56.122	ENSMEUG00000000187	-	100	56.122	Notamacropus_eugenii
ENSDARG00000006567	dus4l	72	70.136	ENSOPRG00000005394	DUS4L	94	70.136	Ochotona_princeps
ENSDARG00000006567	dus4l	97	69.128	ENSODEG00000001582	DUS4L	94	69.128	Octodon_degus
ENSDARG00000006567	dus4l	98	81.126	ENSONIG00000004993	dus4l	96	81.126	Oreochromis_niloticus
ENSDARG00000006567	dus4l	98	71.000	ENSOANG00000003179	DUS4L	98	71.000	Ornithorhynchus_anatinus
ENSDARG00000006567	dus4l	98	69.205	ENSOCUG00000012784	DUS4L	95	69.205	Oryctolagus_cuniculus
ENSDARG00000006567	dus4l	98	81.126	ENSORLG00000008306	dus4l	94	81.126	Oryzias_latipes
ENSDARG00000006567	dus4l	98	80.464	ENSORLG00020020542	dus4l	94	80.464	Oryzias_latipes_hni
ENSDARG00000006567	dus4l	98	81.126	ENSORLG00015001648	dus4l	94	81.126	Oryzias_latipes_hsok
ENSDARG00000006567	dus4l	98	81.126	ENSOMEG00000017582	dus4l	96	81.126	Oryzias_melastigma
ENSDARG00000006567	dus4l	97	70.805	ENSOGAG00000013113	DUS4L	93	70.805	Otolemur_garnettii
ENSDARG00000006567	dus4l	97	69.463	ENSOARG00000005713	DUS4L	93	69.463	Ovis_aries
ENSDARG00000006567	dus4l	97	70.470	ENSPPAG00000031482	DUS4L	94	70.470	Pan_paniscus
ENSDARG00000006567	dus4l	97	69.463	ENSPPRG00000010523	DUS4L	94	69.463	Panthera_pardus
ENSDARG00000006567	dus4l	97	69.463	ENSPTIG00000005318	DUS4L	94	69.463	Panthera_tigris_altaica
ENSDARG00000006567	dus4l	97	70.470	ENSPTRG00000019579	DUS4L	94	70.470	Pan_troglodytes
ENSDARG00000006567	dus4l	97	70.134	ENSPANG00000007111	DUS4L	94	70.134	Papio_anubis
ENSDARG00000006567	dus4l	91	79.643	ENSPKIG00000016429	dus4l	88	79.643	Paramormyrops_kingsleyae
ENSDARG00000006567	dus4l	97	72.819	ENSPSIG00000013488	DUS4L	95	72.819	Pelodiscus_sinensis
ENSDARG00000006567	dus4l	98	80.731	ENSPMGG00000012731	dus4l	96	80.731	Periophthalmus_magnuspinnatus
ENSDARG00000006567	dus4l	97	69.799	ENSPEMG00000022807	Dus4l	94	69.799	Peromyscus_maniculatus_bairdii
ENSDARG00000006567	dus4l	97	70.134	ENSPCIG00000005163	DUS4L	99	70.543	Phascolarctos_cinereus
ENSDARG00000006567	dus4l	99	79.868	ENSPFOG00000004246	dus4l	95	79.868	Poecilia_formosa
ENSDARG00000006567	dus4l	99	79.868	ENSPLAG00000021398	dus4l	96	79.868	Poecilia_latipinna
ENSDARG00000006567	dus4l	99	79.868	ENSPMEG00000010911	dus4l	95	79.868	Poecilia_mexicana
ENSDARG00000006567	dus4l	99	79.085	ENSPREG00000021419	dus4l	97	79.085	Poecilia_reticulata
ENSDARG00000006567	dus4l	97	68.456	ENSPPYG00000017901	DUS4L	94	68.456	Pongo_abelii
ENSDARG00000006567	dus4l	73	70.000	ENSPCAG00000012668	-	71	70.000	Procavia_capensis
ENSDARG00000006567	dus4l	97	68.456	ENSPCOG00000015747	DUS4L	94	68.456	Propithecus_coquereli
ENSDARG00000006567	dus4l	97	57.047	ENSPVAG00000014548	DUS4L	93	57.047	Pteropus_vampyrus
ENSDARG00000006567	dus4l	91	82.796	ENSPNYG00000015730	dus4l	93	82.796	Pundamilia_nyererei
ENSDARG00000006567	dus4l	98	83.333	ENSPNAG00000021961	dus4l	99	83.333	Pygocentrus_nattereri
ENSDARG00000006567	dus4l	97	70.134	ENSRNOG00000008155	Dus4l	93	70.134	Rattus_norvegicus
ENSDARG00000006567	dus4l	97	70.134	ENSRBIG00000025544	DUS4L	94	70.134	Rhinopithecus_bieti
ENSDARG00000006567	dus4l	97	70.134	ENSRROG00000000241	DUS4L	94	70.134	Rhinopithecus_roxellana
ENSDARG00000006567	dus4l	94	40.541	YLR405W	-	80	40.541	Saccharomyces_cerevisiae
ENSDARG00000006567	dus4l	97	70.470	ENSSBOG00000025576	DUS4L	97	70.470	Saimiri_boliviensis_boliviensis
ENSDARG00000006567	dus4l	97	68.792	ENSSHAG00000012813	DUS4L	92	68.792	Sarcophilus_harrisii
ENSDARG00000006567	dus4l	99	80.328	ENSSFOG00015005943	dus4l	100	80.328	Scleropages_formosus
ENSDARG00000006567	dus4l	98	80.464	ENSSMAG00000018502	dus4l	95	80.464	Scophthalmus_maximus
ENSDARG00000006567	dus4l	83	80.469	ENSSDUG00000002389	dus4l	50	80.469	Seriola_dumerili
ENSDARG00000006567	dus4l	98	80.795	ENSSLDG00000008740	dus4l	97	80.795	Seriola_lalandi_dorsalis
ENSDARG00000006567	dus4l	97	74.497	ENSSPUG00000019140	DUS4L	94	74.497	Sphenodon_punctatus
ENSDARG00000006567	dus4l	98	80.795	ENSSPAG00000020826	dus4l	96	80.795	Stegastes_partitus
ENSDARG00000006567	dus4l	99	69.180	ENSSSCG00000028433	DUS4L	99	69.751	Sus_scrofa
ENSDARG00000006567	dus4l	98	75.828	ENSTGUG00000003124	DUS4L	96	75.828	Taeniopygia_guttata
ENSDARG00000006567	dus4l	98	78.333	ENSTRUG00000016285	dus4l	98	78.333	Takifugu_rubripes
ENSDARG00000006567	dus4l	99	52.475	ENSTBEG00000001401	DUS4L	96	52.475	Tupaia_belangeri
ENSDARG00000006567	dus4l	90	60.289	ENSTTRG00000006833	DUS4L	100	60.289	Tursiops_truncatus
ENSDARG00000006567	dus4l	97	69.900	ENSUMAG00000018230	DUS4L	94	69.900	Ursus_maritimus
ENSDARG00000006567	dus4l	97	68.792	ENSVPAG00000008640	DUS4L	94	68.792	Vicugna_pacos
ENSDARG00000006567	dus4l	97	68.792	ENSVVUG00000021846	DUS4L	94	68.792	Vulpes_vulpes
ENSDARG00000006567	dus4l	91	73.050	ENSXETG00000005925	dus4l	99	73.050	Xenopus_tropicalis
ENSDARG00000006567	dus4l	99	78.758	ENSXMAG00000008454	dus4l	98	78.758	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0008033	tRNA processing	-	IEA	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0017150	tRNA dihydrouridine synthase activity	21873635.	IBA	Function
GO:0017150	tRNA dihydrouridine synthase activity	-	IEA	Function
GO:0050660	flavin adenine dinucleotide binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process