EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000007065 (Gene tree)
Gene ID: 550455
Gene Symbol: mrps18b
Alias: wu:fj45h02|zgc:112517
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5785 bases
Position: chr19:30423117-30428901
Accession: ZDB-GENE-050417-278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000014244	Ribosomal_S18	PF01084.20	5.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000023074	-	1124	-	ENSDARP00000014244	242 (aa)	-	Q566S7

Gene Model

Click here to download ENSDARG00000007065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000007065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000007065	mrps18b	88	47.706	ENSG00000204568	MRPS18B	84	47.706	Homo_sapiens
ENSDARG00000007065	mrps18b	99	56.504	ENSAPOG00000003719	mrps18b	100	56.504	Acanthochromis_polyacanthus
ENSDARG00000007065	mrps18b	81	50.769	ENSAMEG00000013279	MRPS18B	76	50.769	Ailuropoda_melanoleuca
ENSDARG00000007065	mrps18b	99	60.976	ENSACIG00000013156	mrps18b	100	60.976	Amphilophus_citrinellus
ENSDARG00000007065	mrps18b	99	58.130	ENSAOCG00000008569	mrps18b	100	58.130	Amphiprion_ocellaris
ENSDARG00000007065	mrps18b	99	57.724	ENSAPEG00000008204	mrps18b	100	57.724	Amphiprion_percula
ENSDARG00000007065	mrps18b	99	57.258	ENSATEG00000012949	mrps18b	100	57.258	Anabas_testudineus
ENSDARG00000007065	mrps18b	75	59.890	ENSACAG00000010755	MRPS18B	85	59.890	Anolis_carolinensis
ENSDARG00000007065	mrps18b	83	49.029	ENSANAG00000021210	MRPS18B	84	47.248	Aotus_nancymaae
ENSDARG00000007065	mrps18b	67	51.553	ENSACLG00000004576	-	79	51.553	Astatotilapia_calliptera
ENSDARG00000007065	mrps18b	99	57.317	ENSACLG00000015409	mrps18b	100	57.317	Astatotilapia_calliptera
ENSDARG00000007065	mrps18b	99	61.538	ENSAMXG00000034123	mrps18b	100	61.538	Astyanax_mexicanus
ENSDARG00000007065	mrps18b	81	50.769	ENSBTAG00000006936	MRPS18B	76	50.769	Bos_taurus
ENSDARG00000007065	mrps18b	88	46.789	ENSCJAG00000019949	MRPS18B	84	46.789	Callithrix_jacchus
ENSDARG00000007065	mrps18b	81	50.769	ENSCAFG00000000411	MRPS18B	76	50.769	Canis_familiaris
ENSDARG00000007065	mrps18b	81	50.769	ENSCAFG00020017573	MRPS18B	76	50.769	Canis_lupus_dingo
ENSDARG00000007065	mrps18b	81	50.769	ENSCHIG00000021770	MRPS18B	76	50.769	Capra_hircus
ENSDARG00000007065	mrps18b	81	50.256	ENSTSYG00000003333	MRPS18B	77	50.256	Carlito_syrichta
ENSDARG00000007065	mrps18b	81	48.223	ENSCAPG00000000098	MRPS18B	78	48.223	Cavia_aperea
ENSDARG00000007065	mrps18b	81	48.223	ENSCPOG00000015405	MRPS18B	76	48.223	Cavia_porcellus
ENSDARG00000007065	mrps18b	88	47.706	ENSCCAG00000037423	MRPS18B	84	47.706	Cebus_capucinus
ENSDARG00000007065	mrps18b	88	48.165	ENSCATG00000040250	MRPS18B	84	48.165	Cercocebus_atys
ENSDARG00000007065	mrps18b	81	47.716	ENSCLAG00000003282	MRPS18B	78	47.716	Chinchilla_lanigera
ENSDARG00000007065	mrps18b	88	47.248	ENSCSAG00000018793	-	84	47.248	Chlorocebus_sabaeus
ENSDARG00000007065	mrps18b	79	50.262	ENSCHOG00000005581	MRPS18B	74	50.262	Choloepus_hoffmanni
ENSDARG00000007065	mrps18b	80	57.071	ENSCPBG00000018833	MRPS18B	90	52.632	Chrysemys_picta_bellii
ENSDARG00000007065	mrps18b	54	38.636	ENSCING00000014510	-	52	38.636	Ciona_intestinalis
ENSDARG00000007065	mrps18b	88	47.248	ENSCANG00000043568	MRPS18B	84	47.248	Colobus_angolensis_palliatus
ENSDARG00000007065	mrps18b	76	51.892	ENSCGRG00001018086	Mrps18b	73	51.892	Cricetulus_griseus_chok1gshd
ENSDARG00000007065	mrps18b	76	51.892	ENSCGRG00000013676	Mrps18b	73	51.892	Cricetulus_griseus_crigri
ENSDARG00000007065	mrps18b	99	58.367	ENSCSEG00000018717	mrps18b	100	58.367	Cynoglossus_semilaevis
ENSDARG00000007065	mrps18b	89	58.744	ENSCVAG00000004836	mrps18b	88	58.744	Cyprinodon_variegatus
ENSDARG00000007065	mrps18b	81	49.231	ENSDNOG00000032393	MRPS18B	73	49.231	Dasypus_novemcinctus
ENSDARG00000007065	mrps18b	54	45.802	FBgn0032849	mRpS18B	63	45.802	Drosophila_melanogaster
ENSDARG00000007065	mrps18b	81	44.388	ENSETEG00000003113	MRPS18B	76	44.388	Echinops_telfairi
ENSDARG00000007065	mrps18b	80	50.515	ENSEBUG00000003724	mrps18b	73	50.515	Eptatretus_burgeri
ENSDARG00000007065	mrps18b	81	50.256	ENSEASG00005018922	MRPS18B	76	50.256	Equus_asinus_asinus
ENSDARG00000007065	mrps18b	81	49.231	ENSECAG00000022485	MRPS18B	76	49.231	Equus_caballus
ENSDARG00000007065	mrps18b	99	46.473	ENSEEUG00000010352	MRPS18B	76	51.269	Erinaceus_europaeus
ENSDARG00000007065	mrps18b	99	57.676	ENSELUG00000023727	mrps18b	96	57.676	Esox_lucius
ENSDARG00000007065	mrps18b	81	50.256	ENSFCAG00000007686	MRPS18B	76	50.256	Felis_catus
ENSDARG00000007065	mrps18b	81	47.716	ENSFDAG00000012231	MRPS18B	81	47.716	Fukomys_damarensis
ENSDARG00000007065	mrps18b	99	52.720	ENSFHEG00000017861	mrps18b	93	52.720	Fundulus_heteroclitus
ENSDARG00000007065	mrps18b	80	62.694	ENSGMOG00000013271	mrps18b	100	62.694	Gadus_morhua
ENSDARG00000007065	mrps18b	99	56.612	ENSGACG00000001379	mrps18b	93	63.587	Gasterosteus_aculeatus
ENSDARG00000007065	mrps18b	88	45.872	ENSGGOG00000011317	MRPS18B	84	45.872	Gorilla_gorilla
ENSDARG00000007065	mrps18b	99	57.317	ENSHBUG00000008445	mrps18b	100	57.317	Haplochromis_burtoni
ENSDARG00000007065	mrps18b	95	42.857	ENSHGLG00000019371	MRPS18B	90	42.857	Heterocephalus_glaber_female
ENSDARG00000007065	mrps18b	95	42.857	ENSHGLG00100010530	MRPS18B	87	42.857	Heterocephalus_glaber_male
ENSDARG00000007065	mrps18b	100	55.466	ENSHCOG00000007012	mrps18b	100	55.466	Hippocampus_comes
ENSDARG00000007065	mrps18b	99	61.475	ENSIPUG00000013958	mrps18b	100	61.475	Ictalurus_punctatus
ENSDARG00000007065	mrps18b	79	51.562	ENSSTOG00000011853	MRPS18B	82	51.562	Ictidomys_tridecemlineatus
ENSDARG00000007065	mrps18b	73	53.672	ENSJJAG00000003794	Mrps18b	72	53.672	Jaculus_jaculus
ENSDARG00000007065	mrps18b	99	59.514	ENSKMAG00000003449	mrps18b	93	59.514	Kryptolebias_marmoratus
ENSDARG00000007065	mrps18b	99	49.798	ENSLBEG00000012943	mrps18b	100	49.798	Labrus_bergylta
ENSDARG00000007065	mrps18b	83	59.406	ENSLACG00000004722	MRPS18B	83	59.406	Latimeria_chalumnae
ENSDARG00000007065	mrps18b	81	48.980	ENSLAFG00000017285	MRPS18B	76	48.980	Loxodonta_africana
ENSDARG00000007065	mrps18b	88	48.165	ENSMFAG00000003966	MRPS18B	84	48.165	Macaca_fascicularis
ENSDARG00000007065	mrps18b	88	48.165	ENSMMUG00000006525	MRPS18B	84	48.165	Macaca_mulatta
ENSDARG00000007065	mrps18b	88	48.165	ENSMNEG00000045059	MRPS18B	84	48.165	Macaca_nemestrina
ENSDARG00000007065	mrps18b	88	45.413	ENSMLEG00000033833	MRPS18B	84	45.413	Mandrillus_leucophaeus
ENSDARG00000007065	mrps18b	99	58.921	ENSMAMG00000020243	mrps18b	100	58.921	Mastacembelus_armatus
ENSDARG00000007065	mrps18b	75	48.901	ENSMZEG00005019697	-	80	48.901	Maylandia_zebra
ENSDARG00000007065	mrps18b	99	57.317	ENSMZEG00005017910	mrps18b	100	57.317	Maylandia_zebra
ENSDARG00000007065	mrps18b	76	52.432	ENSMAUG00000019160	Mrps18b	73	52.432	Mesocricetus_auratus
ENSDARG00000007065	mrps18b	80	49.485	ENSMICG00000031536	MRPS18B	75	49.485	Microcebus_murinus
ENSDARG00000007065	mrps18b	79	50.000	ENSMOCG00000013273	Mrps18b	76	50.000	Microtus_ochrogaster
ENSDARG00000007065	mrps18b	90	61.261	ENSMMOG00000012076	mrps18b	93	61.261	Mola_mola
ENSDARG00000007065	mrps18b	76	54.595	ENSMODG00000015933	MRPS18B	90	49.074	Monodelphis_domestica
ENSDARG00000007065	mrps18b	85	61.165	ENSMALG00000019456	mrps18b	82	61.165	Monopterus_albus
ENSDARG00000007065	mrps18b	91	46.364	MGP_CAROLIEiJ_G0021541	Mrps18b	85	46.544	Mus_caroli
ENSDARG00000007065	mrps18b	91	46.364	ENSMUSG00000024436	Mrps18b	85	46.544	Mus_musculus
ENSDARG00000007065	mrps18b	91	46.364	MGP_PahariEiJ_G0020535	Mrps18b	85	46.544	Mus_pahari
ENSDARG00000007065	mrps18b	91	45.455	MGP_SPRETEiJ_G0022448	Mrps18b	95	45.506	Mus_spretus
ENSDARG00000007065	mrps18b	81	51.282	ENSMPUG00000011739	MRPS18B	76	51.282	Mustela_putorius_furo
ENSDARG00000007065	mrps18b	79	52.083	ENSMLUG00000008850	MRPS18B	76	52.083	Myotis_lucifugus
ENSDARG00000007065	mrps18b	89	47.222	ENSNGAG00000017874	Mrps18b	84	47.418	Nannospalax_galili
ENSDARG00000007065	mrps18b	72	52.571	ENSNBRG00000020716	-	97	52.571	Neolamprologus_brichardi
ENSDARG00000007065	mrps18b	88	47.706	ENSNLEG00000005224	MRPS18B	84	47.706	Nomascus_leucogenys
ENSDARG00000007065	mrps18b	76	54.054	ENSMEUG00000012457	MRPS18B	90	49.074	Notamacropus_eugenii
ENSDARG00000007065	mrps18b	93	57.940	ENSONIG00000015945	mrps18b	100	58.130	Oreochromis_niloticus
ENSDARG00000007065	mrps18b	80	50.777	ENSOCUG00000002149	MRPS18B	78	50.769	Oryctolagus_cuniculus
ENSDARG00000007065	mrps18b	89	57.209	ENSORLG00000010546	mrps18b	96	57.209	Oryzias_latipes
ENSDARG00000007065	mrps18b	99	54.393	ENSORLG00020018506	mrps18b	99	54.393	Oryzias_latipes_hni
ENSDARG00000007065	mrps18b	99	53.975	ENSORLG00015010248	mrps18b	99	53.975	Oryzias_latipes_hsok
ENSDARG00000007065	mrps18b	99	54.694	ENSOMEG00000008194	mrps18b	99	54.694	Oryzias_melastigma
ENSDARG00000007065	mrps18b	81	49.746	ENSOGAG00000004435	MRPS18B	77	49.746	Otolemur_garnettii
ENSDARG00000007065	mrps18b	81	50.769	ENSOARG00000012647	MRPS18B	76	50.769	Ovis_aries
ENSDARG00000007065	mrps18b	88	46.789	ENSPPAG00000018246	-	84	46.789	Pan_paniscus
ENSDARG00000007065	mrps18b	88	47.706	ENSPPAG00000039692	-	84	47.706	Pan_paniscus
ENSDARG00000007065	mrps18b	81	51.282	ENSPPRG00000003538	MRPS18B	76	51.282	Panthera_pardus
ENSDARG00000007065	mrps18b	81	51.282	ENSPTIG00000016443	MRPS18B	76	51.282	Panthera_tigris_altaica
ENSDARG00000007065	mrps18b	88	47.706	ENSPTRG00000017932	MRPS18B	84	47.706	Pan_troglodytes
ENSDARG00000007065	mrps18b	88	47.706	ENSPANG00000017647	MRPS18B	84	47.706	Papio_anubis
ENSDARG00000007065	mrps18b	78	64.362	ENSPKIG00000011007	mrps18b	75	64.362	Paramormyrops_kingsleyae
ENSDARG00000007065	mrps18b	76	57.923	ENSPSIG00000011533	MRPS18B	76	57.923	Pelodiscus_sinensis
ENSDARG00000007065	mrps18b	99	56.735	ENSPMGG00000020546	mrps18b	100	56.735	Periophthalmus_magnuspinnatus
ENSDARG00000007065	mrps18b	79	48.438	ENSPEMG00000001695	Mrps18b	82	48.438	Peromyscus_maniculatus_bairdii
ENSDARG00000007065	mrps18b	86	48.826	ENSPMAG00000001665	mrps18b	90	48.826	Petromyzon_marinus
ENSDARG00000007065	mrps18b	83	50.000	ENSPCIG00000014983	MRPS18B	80	49.074	Phascolarctos_cinereus
ENSDARG00000007065	mrps18b	76	65.946	ENSPFOG00000016437	mrps18b	66	65.946	Poecilia_formosa
ENSDARG00000007065	mrps18b	88	60.000	ENSPLAG00000002566	mrps18b	87	60.000	Poecilia_latipinna
ENSDARG00000007065	mrps18b	76	66.486	ENSPMEG00000010978	mrps18b	65	66.486	Poecilia_mexicana
ENSDARG00000007065	mrps18b	78	61.053	ENSPREG00000012186	mrps18b	71	61.053	Poecilia_reticulata
ENSDARG00000007065	mrps18b	88	43.119	ENSPPYG00000016412	MRPS18B	83	43.119	Pongo_abelii
ENSDARG00000007065	mrps18b	88	48.624	ENSPCAG00000017028	MRPS18B	84	48.624	Procavia_capensis
ENSDARG00000007065	mrps18b	80	44.330	ENSPCOG00000015431	MRPS18B	75	44.330	Propithecus_coquereli
ENSDARG00000007065	mrps18b	81	52.821	ENSPVAG00000003981	MRPS18B	76	52.821	Pteropus_vampyrus
ENSDARG00000007065	mrps18b	99	58.264	ENSPNYG00000011383	mrps18b	100	58.264	Pundamilia_nyererei
ENSDARG00000007065	mrps18b	52	56.800	ENSPNYG00000004553	-	67	56.800	Pundamilia_nyererei
ENSDARG00000007065	mrps18b	99	65.714	ENSPNAG00000029858	mrps18b	100	65.714	Pygocentrus_nattereri
ENSDARG00000007065	mrps18b	84	49.510	ENSRNOG00000000804	Mrps18b	92	41.975	Rattus_norvegicus
ENSDARG00000007065	mrps18b	88	48.165	ENSRBIG00000037128	MRPS18B	84	48.165	Rhinopithecus_bieti
ENSDARG00000007065	mrps18b	88	48.165	ENSRROG00000017497	MRPS18B	84	48.165	Rhinopithecus_roxellana
ENSDARG00000007065	mrps18b	88	46.789	ENSSBOG00000023414	MRPS18B	88	46.948	Saimiri_boliviensis_boliviensis
ENSDARG00000007065	mrps18b	74	51.667	ENSSHAG00000006769	MRPS18B	72	51.667	Sarcophilus_harrisii
ENSDARG00000007065	mrps18b	80	58.883	ENSSFOG00015015664	mrps18b	79	60.526	Scleropages_formosus
ENSDARG00000007065	mrps18b	99	56.504	ENSSMAG00000020784	mrps18b	100	56.504	Scophthalmus_maximus
ENSDARG00000007065	mrps18b	93	57.522	ENSSDUG00000009519	mrps18b	100	57.741	Seriola_dumerili
ENSDARG00000007065	mrps18b	63	68.421	ENSSLDG00000000473	mrps18b	83	53.879	Seriola_lalandi_dorsalis
ENSDARG00000007065	mrps18b	93	48.908	ENSSPUG00000015230	MRPS18B	90	48.908	Sphenodon_punctatus
ENSDARG00000007065	mrps18b	99	54.098	ENSSPAG00000004508	mrps18b	100	54.508	Stegastes_partitus
ENSDARG00000007065	mrps18b	81	51.795	ENSSSCG00000029425	MRPS18B	76	51.795	Sus_scrofa
ENSDARG00000007065	mrps18b	95	55.649	ENSTRUG00000022309	mrps18b	83	55.649	Takifugu_rubripes
ENSDARG00000007065	mrps18b	81	51.795	ENSTTRG00000008313	MRPS18B	76	51.795	Tursiops_truncatus
ENSDARG00000007065	mrps18b	81	50.256	ENSUAMG00000005833	MRPS18B	76	50.256	Ursus_americanus
ENSDARG00000007065	mrps18b	81	50.256	ENSUMAG00000019652	MRPS18B	58	50.256	Ursus_maritimus
ENSDARG00000007065	mrps18b	65	52.229	ENSVPAG00000001181	MRPS18B	81	52.229	Vicugna_pacos
ENSDARG00000007065	mrps18b	81	51.282	ENSVVUG00000009631	MRPS18B	76	51.282	Vulpes_vulpes
ENSDARG00000007065	mrps18b	83	55.721	ENSXETG00000032503	MRPS18B	88	55.721	Xenopus_tropicalis
ENSDARG00000007065	mrps18b	82	62.312	ENSXCOG00000003011	mrps18b	99	62.312	Xiphophorus_couchianus
ENSDARG00000007065	mrps18b	82	62.121	ENSXMAG00000016698	mrps18b	99	53.846	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0032543	mitochondrial translation	-	IEA	Process