EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000007130 (Gene tree)
Gene ID: 550350
Gene Symbol: mrto4
Alias: fb71a02|wu:fb71a02|zgc:110388
Full Name: MRT4 homolog%2C ribosome maturation factor
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7816 bases
Position: chr11:41846059-41853874
Accession: ZDB-GENE-050417-142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000002982	Ribosomal_L10	PF00466.20	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000002556	-	1061	-	ENSDARP00000002982	242 (aa)	-	F1QTS9

Gene Model

Click here to download ENSDARG00000007130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000007130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000007130	mrto4	92	75.336	ENSG00000053372	MRTO4	94	74.449	Homo_sapiens
ENSDARG00000007130	mrto4	68	74.556	ENSAPOG00000013290	-	90	74.432	Acanthochromis_polyacanthus
ENSDARG00000007130	mrto4	68	74.556	ENSAPOG00000013189	-	90	74.432	Acanthochromis_polyacanthus
ENSDARG00000007130	mrto4	89	84.259	ENSAPOG00000011387	mrto4	100	78.661	Acanthochromis_polyacanthus
ENSDARG00000007130	mrto4	90	48.402	ENSAMEG00000014981	-	100	48.402	Ailuropoda_melanoleuca
ENSDARG00000007130	mrto4	92	74.888	ENSAMEG00000003014	MRTO4	94	74.009	Ailuropoda_melanoleuca
ENSDARG00000007130	mrto4	89	84.259	ENSACIG00000008213	mrto4	97	80.172	Amphilophus_citrinellus
ENSDARG00000007130	mrto4	86	83.575	ENSAOCG00000006483	mrto4	89	79.464	Amphiprion_ocellaris
ENSDARG00000007130	mrto4	94	79.915	ENSAPEG00000004866	mrto4	99	79.915	Amphiprion_percula
ENSDARG00000007130	mrto4	89	85.648	ENSATEG00000024976	mrto4	98	80.932	Anabas_testudineus
ENSDARG00000007130	mrto4	64	75.000	ENSAPLG00000013861	MRTO4	88	75.000	Anas_platyrhynchos
ENSDARG00000007130	mrto4	92	74.888	ENSANAG00000029674	MRTO4	94	74.009	Aotus_nancymaae
ENSDARG00000007130	mrto4	89	85.185	ENSACLG00000016523	mrto4	100	78.661	Astatotilapia_calliptera
ENSDARG00000007130	mrto4	93	89.381	ENSAMXG00000003899	mrto4	94	89.381	Astyanax_mexicanus
ENSDARG00000007130	mrto4	92	75.785	ENSBTAG00000011951	MRTO4	94	74.890	Bos_taurus
ENSDARG00000007130	mrto4	99	72.083	ENSCJAG00000006812	MRTO4	94	74.009	Callithrix_jacchus
ENSDARG00000007130	mrto4	92	65.471	ENSCAFG00000000532	-	94	64.758	Canis_familiaris
ENSDARG00000007130	mrto4	92	73.543	ENSCAFG00000015189	-	94	72.687	Canis_familiaris
ENSDARG00000007130	mrto4	90	51.613	ENSCAFG00000009080	-	99	51.613	Canis_familiaris
ENSDARG00000007130	mrto4	92	73.543	ENSCAFG00020008173	MRTO4	94	72.687	Canis_lupus_dingo
ENSDARG00000007130	mrto4	92	75.785	ENSCHIG00000014751	MRTO4	94	74.890	Capra_hircus
ENSDARG00000007130	mrto4	88	54.717	ENSCHIG00000010639	-	91	54.717	Capra_hircus
ENSDARG00000007130	mrto4	92	73.543	ENSTSYG00000013413	MRTO4	94	72.687	Carlito_syrichta
ENSDARG00000007130	mrto4	83	71.000	ENSCAPG00000012648	MRTO4	91	68.932	Cavia_aperea
ENSDARG00000007130	mrto4	93	74.554	ENSCPOG00000033237	MRTO4	95	72.609	Cavia_porcellus
ENSDARG00000007130	mrto4	92	74.888	ENSCCAG00000036206	MRTO4	94	74.009	Cebus_capucinus
ENSDARG00000007130	mrto4	93	65.086	ENSCATG00000030492	-	100	65.086	Cercocebus_atys
ENSDARG00000007130	mrto4	93	73.661	ENSCLAG00000001997	MRTO4	92	73.661	Chinchilla_lanigera
ENSDARG00000007130	mrto4	91	74.545	ENSCSAG00000000876	-	92	74.545	Chlorocebus_sabaeus
ENSDARG00000007130	mrto4	92	73.991	ENSCSAG00000018596	-	94	73.128	Chlorocebus_sabaeus
ENSDARG00000007130	mrto4	90	78.082	ENSCPBG00000023562	MRTO4	98	74.370	Chrysemys_picta_bellii
ENSDARG00000007130	mrto4	90	60.550	ENSCSAVG00000011770	-	78	60.550	Ciona_savignyi
ENSDARG00000007130	mrto4	92	69.058	ENSCANG00000005353	-	94	68.282	Colobus_angolensis_palliatus
ENSDARG00000007130	mrto4	92	74.888	ENSCANG00000002395	-	94	74.009	Colobus_angolensis_palliatus
ENSDARG00000007130	mrto4	98	65.126	ENSCGRG00001001286	-	99	65.801	Cricetulus_griseus_chok1gshd
ENSDARG00000007130	mrto4	91	75.000	ENSCGRG00001005758	-	92	75.000	Cricetulus_griseus_chok1gshd
ENSDARG00000007130	mrto4	98	65.126	ENSCGRG00000001527	-	99	65.801	Cricetulus_griseus_crigri
ENSDARG00000007130	mrto4	91	72.727	ENSCGRG00000010649	-	92	72.727	Cricetulus_griseus_crigri
ENSDARG00000007130	mrto4	90	83.486	ENSCSEG00000021629	mrto4	91	83.486	Cynoglossus_semilaevis
ENSDARG00000007130	mrto4	90	83.562	ENSCVAG00000012249	mrto4	97	80.870	Cyprinodon_variegatus
ENSDARG00000007130	mrto4	86	72.596	ENSDNOG00000030871	-	87	72.596	Dasypus_novemcinctus
ENSDARG00000007130	mrto4	97	55.230	ENSDNOG00000045395	-	94	55.459	Dasypus_novemcinctus
ENSDARG00000007130	mrto4	92	75.785	ENSDNOG00000010119	-	94	74.890	Dasypus_novemcinctus
ENSDARG00000007130	mrto4	91	74.091	ENSDORG00000025382	Mrto4	92	74.091	Dipodomys_ordii
ENSDARG00000007130	mrto4	98	72.614	ENSETEG00000001675	MRTO4	92	75.446	Echinops_telfairi
ENSDARG00000007130	mrto4	91	73.636	ENSEASG00005014967	MRTO4	92	73.636	Equus_asinus_asinus
ENSDARG00000007130	mrto4	91	73.636	ENSECAG00000012598	MRTO4	92	73.636	Equus_caballus
ENSDARG00000007130	mrto4	88	59.346	ENSEEUG00000013520	MRTO4	93	59.346	Erinaceus_europaeus
ENSDARG00000007130	mrto4	90	85.845	ENSELUG00000011152	mrto4	95	83.700	Esox_lucius
ENSDARG00000007130	mrto4	99	71.967	ENSFCAG00000008771	MRTO4	95	73.568	Felis_catus
ENSDARG00000007130	mrto4	90	73.973	ENSFALG00000010619	MRTO4	96	71.616	Ficedula_albicollis
ENSDARG00000007130	mrto4	93	75.000	ENSFDAG00000013300	MRTO4	92	75.000	Fukomys_damarensis
ENSDARG00000007130	mrto4	90	83.486	ENSFHEG00000022920	mrto4	97	80.786	Fundulus_heteroclitus
ENSDARG00000007130	mrto4	88	84.038	ENSGMOG00000001422	mrto4	97	81.696	Gadus_morhua
ENSDARG00000007130	mrto4	90	73.516	ENSGALG00000003991	MRTO4	97	72.489	Gallus_gallus
ENSDARG00000007130	mrto4	90	82.648	ENSGAFG00000012570	mrto4	99	79.060	Gambusia_affinis
ENSDARG00000007130	mrto4	92	80.269	ENSGACG00000001672	mrto4	99	77.966	Gasterosteus_aculeatus
ENSDARG00000007130	mrto4	87	76.190	ENSGAGG00000012997	MRTO4	94	73.214	Gopherus_agassizii
ENSDARG00000007130	mrto4	86	62.500	ENSGGOG00000042625	-	100	58.298	Gorilla_gorilla
ENSDARG00000007130	mrto4	92	75.336	ENSGGOG00000000533	MRTO4	94	74.449	Gorilla_gorilla
ENSDARG00000007130	mrto4	90	52.535	ENSGGOG00000036991	-	86	52.535	Gorilla_gorilla
ENSDARG00000007130	mrto4	89	85.185	ENSHBUG00000009670	mrto4	100	78.661	Haplochromis_burtoni
ENSDARG00000007130	mrto4	93	74.554	ENSHGLG00000012157	MRTO4	93	74.554	Heterocephalus_glaber_female
ENSDARG00000007130	mrto4	93	74.554	ENSHGLG00100014484	MRTO4	93	74.554	Heterocephalus_glaber_male
ENSDARG00000007130	mrto4	98	74.790	ENSHCOG00000019894	mrto4	92	79.358	Hippocampus_comes
ENSDARG00000007130	mrto4	93	87.500	ENSIPUG00000002957	mrto4	93	87.500	Ictalurus_punctatus
ENSDARG00000007130	mrto4	92	74.439	ENSSTOG00000028112	MRTO4	94	73.568	Ictidomys_tridecemlineatus
ENSDARG00000007130	mrto4	91	71.946	ENSJJAG00000017998	Mrto4	92	71.946	Jaculus_jaculus
ENSDARG00000007130	mrto4	90	82.192	ENSKMAG00000010148	mrto4	98	79.310	Kryptolebias_marmoratus
ENSDARG00000007130	mrto4	89	86.977	ENSLBEG00000025010	mrto4	99	81.624	Labrus_bergylta
ENSDARG00000007130	mrto4	91	79.091	ENSLACG00000019155	MRTO4	96	76.419	Latimeria_chalumnae
ENSDARG00000007130	mrto4	89	83.796	ENSLOCG00000004468	mrto4	88	83.796	Lepisosteus_oculatus
ENSDARG00000007130	mrto4	91	75.566	ENSLAFG00000010416	MRTO4	92	75.566	Loxodonta_africana
ENSDARG00000007130	mrto4	92	75.336	ENSMFAG00000033225	-	94	74.449	Macaca_fascicularis
ENSDARG00000007130	mrto4	93	56.195	ENSMMUG00000044851	-	91	56.502	Macaca_mulatta
ENSDARG00000007130	mrto4	92	75.336	ENSMMUG00000038335	MRTO4	94	74.449	Macaca_mulatta
ENSDARG00000007130	mrto4	92	75.336	ENSMNEG00000032783	-	94	74.449	Macaca_nemestrina
ENSDARG00000007130	mrto4	92	75.336	ENSMLEG00000023273	-	94	74.449	Mandrillus_leucophaeus
ENSDARG00000007130	mrto4	89	86.111	ENSMAMG00000014839	mrto4	99	80.252	Mastacembelus_armatus
ENSDARG00000007130	mrto4	89	85.185	ENSMZEG00005013929	mrto4	100	78.661	Maylandia_zebra
ENSDARG00000007130	mrto4	90	74.429	ENSMGAG00000005361	MRTO4	96	72.926	Meleagris_gallopavo
ENSDARG00000007130	mrto4	91	75.000	ENSMAUG00000019627	-	92	75.000	Mesocricetus_auratus
ENSDARG00000007130	mrto4	85	64.390	ENSMICG00000033640	-	100	64.390	Microcebus_murinus
ENSDARG00000007130	mrto4	92	73.543	ENSMICG00000004019	MRTO4	94	72.687	Microcebus_murinus
ENSDARG00000007130	mrto4	71	74.269	ENSMOCG00000018413	Mrto4	89	74.269	Microtus_ochrogaster
ENSDARG00000007130	mrto4	94	78.414	ENSMMOG00000010735	mrto4	95	79.464	Mola_mola
ENSDARG00000007130	mrto4	92	75.785	ENSMODG00000015874	MRTO4	97	73.191	Monodelphis_domestica
ENSDARG00000007130	mrto4	91	84.615	ENSMALG00000007769	mrto4	99	84.615	Monopterus_albus
ENSDARG00000007130	mrto4	91	75.455	MGP_CAROLIEiJ_G0026711	Mrto4	92	75.455	Mus_caroli
ENSDARG00000007130	mrto4	91	75.455	ENSMUSG00000028741	Mrto4	100	78.689	Mus_musculus
ENSDARG00000007130	mrto4	91	75.000	MGP_PahariEiJ_G0029042	Mrto4	92	75.000	Mus_pahari
ENSDARG00000007130	mrto4	91	75.455	MGP_SPRETEiJ_G0027691	Mrto4	92	75.455	Mus_spretus
ENSDARG00000007130	mrto4	92	74.439	ENSMPUG00000016181	MRTO4	94	73.568	Mustela_putorius_furo
ENSDARG00000007130	mrto4	92	75.785	ENSMLUG00000001566	-	94	74.890	Myotis_lucifugus
ENSDARG00000007130	mrto4	92	73.991	ENSMLUG00000025001	-	94	73.128	Myotis_lucifugus
ENSDARG00000007130	mrto4	99	70.293	ENSNGAG00000011660	Mrto4	92	74.091	Nannospalax_galili
ENSDARG00000007130	mrto4	92	82.960	ENSNBRG00000021435	mrto4	93	82.960	Neolamprologus_brichardi
ENSDARG00000007130	mrto4	66	73.125	ENSNLEG00000034965	-	88	71.951	Nomascus_leucogenys
ENSDARG00000007130	mrto4	99	66.527	ENSNLEG00000018006	-	95	68.282	Nomascus_leucogenys
ENSDARG00000007130	mrto4	92	67.265	ENSNLEG00000027896	-	94	66.520	Nomascus_leucogenys
ENSDARG00000007130	mrto4	68	76.829	ENSMEUG00000000027	MRTO4	100	76.829	Notamacropus_eugenii
ENSDARG00000007130	mrto4	92	75.785	ENSOPRG00000012746	MRTO4	95	74.890	Ochotona_princeps
ENSDARG00000007130	mrto4	93	73.214	ENSODEG00000019157	-	92	73.214	Octodon_degus
ENSDARG00000007130	mrto4	93	62.500	ENSODEG00000014016	-	81	62.500	Octodon_degus
ENSDARG00000007130	mrto4	93	68.304	ENSODEG00000014387	-	92	68.304	Octodon_degus
ENSDARG00000007130	mrto4	93	68.750	ENSODEG00000011537	-	92	68.750	Octodon_degus
ENSDARG00000007130	mrto4	93	74.107	ENSODEG00000015379	-	92	74.107	Octodon_degus
ENSDARG00000007130	mrto4	89	84.722	ENSONIG00000014318	mrto4	100	78.243	Oreochromis_niloticus
ENSDARG00000007130	mrto4	95	68.398	ENSOANG00000015345	MRTO4	87	72.249	Ornithorhynchus_anatinus
ENSDARG00000007130	mrto4	97	71.008	ENSOCUG00000000274	MRTO4	92	74.439	Oryctolagus_cuniculus
ENSDARG00000007130	mrto4	90	84.475	ENSORLG00000027922	mrto4	99	80.252	Oryzias_latipes
ENSDARG00000007130	mrto4	90	84.475	ENSORLG00020019412	mrto4	99	80.252	Oryzias_latipes_hni
ENSDARG00000007130	mrto4	90	84.475	ENSORLG00015015309	mrto4	99	80.252	Oryzias_latipes_hsok
ENSDARG00000007130	mrto4	90	84.475	ENSOMEG00000021110	mrto4	99	80.851	Oryzias_melastigma
ENSDARG00000007130	mrto4	92	74.439	ENSOGAG00000010713	-	94	73.568	Otolemur_garnettii
ENSDARG00000007130	mrto4	98	49.580	ENSOGAG00000027996	-	89	52.558	Otolemur_garnettii
ENSDARG00000007130	mrto4	94	51.982	ENSPPAG00000039572	-	93	51.982	Pan_paniscus
ENSDARG00000007130	mrto4	92	74.888	ENSPPAG00000043731	MRTO4	94	74.009	Pan_paniscus
ENSDARG00000007130	mrto4	99	70.711	ENSPPRG00000024765	MRTO4	94	72.247	Panthera_pardus
ENSDARG00000007130	mrto4	99	71.967	ENSPTIG00000016208	MRTO4	95	73.568	Panthera_tigris_altaica
ENSDARG00000007130	mrto4	92	75.336	ENSPTRG00000000262	MRTO4	94	74.449	Pan_troglodytes
ENSDARG00000007130	mrto4	94	52.423	ENSPTRG00000046027	-	100	50.209	Pan_troglodytes
ENSDARG00000007130	mrto4	90	68.349	ENSPANG00000011596	-	95	68.349	Papio_anubis
ENSDARG00000007130	mrto4	92	66.368	ENSPANG00000017838	-	94	65.639	Papio_anubis
ENSDARG00000007130	mrto4	88	84.977	ENSPKIG00000017917	mrto4	96	81.304	Paramormyrops_kingsleyae
ENSDARG00000007130	mrto4	71	76.163	ENSPSIG00000015125	MRTO4	92	73.770	Pelodiscus_sinensis
ENSDARG00000007130	mrto4	89	77.778	ENSPMGG00000013461	mrto4	98	72.996	Periophthalmus_magnuspinnatus
ENSDARG00000007130	mrto4	91	75.000	ENSPEMG00000010459	-	92	75.000	Peromyscus_maniculatus_bairdii
ENSDARG00000007130	mrto4	91	69.507	ENSPEMG00000023720	-	92	69.507	Peromyscus_maniculatus_bairdii
ENSDARG00000007130	mrto4	90	77.523	ENSPCIG00000003652	MRTO4	95	74.569	Phascolarctos_cinereus
ENSDARG00000007130	mrto4	90	84.018	ENSPFOG00000013266	mrto4	98	80.769	Poecilia_formosa
ENSDARG00000007130	mrto4	90	84.018	ENSPLAG00000016285	mrto4	98	80.769	Poecilia_latipinna
ENSDARG00000007130	mrto4	90	84.018	ENSPMEG00000003539	mrto4	97	81.659	Poecilia_mexicana
ENSDARG00000007130	mrto4	90	82.648	ENSPREG00000006249	mrto4	99	79.149	Poecilia_reticulata
ENSDARG00000007130	mrto4	92	75.336	ENSPPYG00000001795	MRTO4	94	74.449	Pongo_abelii
ENSDARG00000007130	mrto4	91	68.182	ENSPCAG00000001458	MRTO4	92	68.182	Procavia_capensis
ENSDARG00000007130	mrto4	99	69.456	ENSPCOG00000014182	MRTO4	94	72.247	Propithecus_coquereli
ENSDARG00000007130	mrto4	94	73.128	ENSPVAG00000005775	MRTO4	93	73.128	Pteropus_vampyrus
ENSDARG00000007130	mrto4	89	84.722	ENSPNYG00000018672	mrto4	100	78.243	Pundamilia_nyererei
ENSDARG00000007130	mrto4	94	82.895	ENSPNAG00000027733	mrto4	96	82.533	Pygocentrus_nattereri
ENSDARG00000007130	mrto4	71	73.410	ENSRNOG00000017979	Mrto4	90	73.410	Rattus_norvegicus
ENSDARG00000007130	mrto4	93	61.504	ENSRBIG00000013434	-	92	61.883	Rhinopithecus_bieti
ENSDARG00000007130	mrto4	81	68.718	ENSRBIG00000036159	-	93	67.839	Rhinopithecus_bieti
ENSDARG00000007130	mrto4	92	73.991	ENSRBIG00000036806	-	94	73.128	Rhinopithecus_bieti
ENSDARG00000007130	mrto4	92	73.991	ENSRROG00000042838	-	94	73.128	Rhinopithecus_roxellana
ENSDARG00000007130	mrto4	92	71.300	ENSRROG00000037374	-	94	70.485	Rhinopithecus_roxellana
ENSDARG00000007130	mrto4	92	73.543	ENSRROG00000011593	-	90	72.687	Rhinopithecus_roxellana
ENSDARG00000007130	mrto4	98	72.152	ENSSBOG00000022924	MRTO4	94	73.568	Saimiri_boliviensis_boliviensis
ENSDARG00000007130	mrto4	88	74.528	ENSSHAG00000008423	MRTO4	97	71.806	Sarcophilus_harrisii
ENSDARG00000007130	mrto4	93	83.482	ENSSFOG00015006887	mrto4	94	83.482	Scleropages_formosus
ENSDARG00000007130	mrto4	92	82.511	ENSSMAG00000014393	mrto4	100	79.498	Scophthalmus_maximus
ENSDARG00000007130	mrto4	89	85.648	ENSSDUG00000015362	mrto4	99	80.169	Seriola_dumerili
ENSDARG00000007130	mrto4	89	86.111	ENSSLDG00000015813	mrto4	99	80.591	Seriola_lalandi_dorsalis
ENSDARG00000007130	mrto4	99	70.124	ENSSARG00000012700	MRTO4	94	72.687	Sorex_araneus
ENSDARG00000007130	mrto4	98	76.695	ENSSPUG00000001110	MRTO4	95	78.571	Sphenodon_punctatus
ENSDARG00000007130	mrto4	95	78.992	ENSSPAG00000007811	mrto4	99	78.992	Stegastes_partitus
ENSDARG00000007130	mrto4	94	73.128	ENSSSCG00000034814	MRTO4	93	73.128	Sus_scrofa
ENSDARG00000007130	mrto4	75	74.033	ENSTGUG00000016935	MRTO4	98	74.033	Taeniopygia_guttata
ENSDARG00000007130	mrto4	89	82.870	ENSTRUG00000019838	mrto4	99	77.215	Takifugu_rubripes
ENSDARG00000007130	mrto4	89	81.944	ENSTNIG00000014802	mrto4	99	76.793	Tetraodon_nigroviridis
ENSDARG00000007130	mrto4	92	74.439	ENSTTRG00000014203	MRTO4	94	73.568	Tursiops_truncatus
ENSDARG00000007130	mrto4	88	73.832	ENSUAMG00000026191	MRTO4	86	72.936	Ursus_americanus
ENSDARG00000007130	mrto4	99	71.967	ENSUMAG00000018964	MRTO4	94	74.009	Ursus_maritimus
ENSDARG00000007130	mrto4	92	73.543	ENSVVUG00000029432	MRTO4	94	72.687	Vulpes_vulpes
ENSDARG00000007130	mrto4	91	75.909	ENSXETG00000020828	mrto4	95	74.236	Xenopus_tropicalis
ENSDARG00000007130	mrto4	98	80.085	ENSXCOG00000013521	mrto4	100	80.687	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	-	IEA	Process
GO:0000956	nuclear-transcribed mRNA catabolic process	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0042254	ribosome biogenesis	-	IEA	Process