EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000007175 (Gene tree)
Gene ID: 566018
Gene Symbol: recql
Alias: zgc:110631
Full Name: RecQ helicase-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 113416 bases
Position: chr4:17424855-17538270
Accession: ZDB-GENE-050809-134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000013573	DEAD	PF00270.29	7e-17	1	1
ENSDARP00000130578	DEAD	PF00270.29	7.1e-17	1	1
ENSDARP00000134146	DEAD	PF00270.29	7.1e-17	1	1
ENSDARP00000091972	DEAD	PF00270.29	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000172169	-	2316	XM_005164761	ENSDARP00000130578	639 (aa)	XP_005164818	Q498Z7
ENSDART00000101198	-	2693	-	ENSDARP00000091972	663 (aa)	-	A0A2R9YJG5
ENSDART00000162204	-	2621	XM_021475057	ENSDARP00000134146	639 (aa)	XP_021330732	Q498Z7
ENSDART00000021610	-	2968	-	ENSDARP00000013573	639 (aa)	-	Q1LUY8

Gene Model

Click here to download ENSDARG00000007175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000007175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000007175	recql	97	57.372	ENSG00000004700	RECQL	100	53.171	Homo_sapiens
ENSDARG00000007175	recql	98	58.095	ENSAMEG00000016233	RECQL	96	58.095	Ailuropoda_melanoleuca
ENSDARG00000007175	recql	98	69.937	ENSACIG00000020781	recql	99	70.411	Amphilophus_citrinellus
ENSDARG00000007175	recql	99	70.533	ENSAOCG00000010244	recql	97	71.111	Amphiprion_ocellaris
ENSDARG00000007175	recql	99	70.469	ENSAPEG00000002040	recql	98	70.469	Amphiprion_percula
ENSDARG00000007175	recql	99	69.797	ENSATEG00000023342	recql	99	69.797	Anabas_testudineus
ENSDARG00000007175	recql	91	60.307	ENSAPLG00000003404	RECQL	99	56.656	Anas_platyrhynchos
ENSDARG00000007175	recql	70	64.080	ENSACAG00000017383	RECQL	98	64.080	Anolis_carolinensis
ENSDARG00000007175	recql	99	56.672	ENSANAG00000035372	RECQL	95	56.672	Aotus_nancymaae
ENSDARG00000007175	recql	99	66.617	ENSACLG00000021416	recql	99	66.766	Astatotilapia_calliptera
ENSDARG00000007175	recql	99	80.184	ENSAMXG00000014249	recql	99	80.184	Astyanax_mexicanus
ENSDARG00000007175	recql	97	57.348	ENSBTAG00000021083	RECQL	96	57.348	Bos_taurus
ENSDARG00000007175	recql	95	44.839	WBGene00019334	K02F3.12	97	44.839	Caenorhabditis_elegans
ENSDARG00000007175	recql	99	55.988	ENSCJAG00000044420	RECQL	98	56.220	Callithrix_jacchus
ENSDARG00000007175	recql	99	57.812	ENSCAFG00000012221	RECQL	98	57.812	Canis_familiaris
ENSDARG00000007175	recql	99	57.812	ENSCAFG00020007872	RECQL	98	57.812	Canis_lupus_dingo
ENSDARG00000007175	recql	93	59.365	ENSCHIG00000024281	RECQL	93	59.365	Capra_hircus
ENSDARG00000007175	recql	93	58.696	ENSTSYG00000009224	RECQL	91	58.696	Carlito_syrichta
ENSDARG00000007175	recql	97	57.440	ENSCPOG00000024644	RECQL	95	57.440	Cavia_porcellus
ENSDARG00000007175	recql	97	57.692	ENSCCAG00000028085	RECQL	95	57.692	Cebus_capucinus
ENSDARG00000007175	recql	97	57.212	ENSCATG00000036038	RECQL	95	57.468	Cercocebus_atys
ENSDARG00000007175	recql	96	57.920	ENSCLAG00000014618	RECQL	96	57.920	Chinchilla_lanigera
ENSDARG00000007175	recql	99	56.672	ENSCSAG00000007974	RECQL	95	56.672	Chlorocebus_sabaeus
ENSDARG00000007175	recql	89	57.000	ENSCHOG00000002452	RECQL	87	57.000	Choloepus_hoffmanni
ENSDARG00000007175	recql	99	56.854	ENSCPBG00000009109	RECQL	96	56.854	Chrysemys_picta_bellii
ENSDARG00000007175	recql	92	42.203	ENSCING00000004012	-	93	42.203	Ciona_intestinalis
ENSDARG00000007175	recql	89	40.690	ENSCSAVG00000011052	-	99	40.690	Ciona_savignyi
ENSDARG00000007175	recql	97	57.051	ENSCANG00000035259	RECQL	95	57.305	Colobus_angolensis_palliatus
ENSDARG00000007175	recql	99	56.677	ENSCGRG00001015141	Recql	98	56.677	Cricetulus_griseus_chok1gshd
ENSDARG00000007175	recql	99	56.677	ENSCGRG00000003545	Recql	98	56.677	Cricetulus_griseus_crigri
ENSDARG00000007175	recql	95	70.425	ENSCSEG00000015932	recql	97	70.425	Cynoglossus_semilaevis
ENSDARG00000007175	recql	94	71.167	ENSCVAG00000014613	recql	97	70.376	Cyprinodon_variegatus
ENSDARG00000007175	recql	75	63.730	ENSDNOG00000013557	RECQL	98	63.730	Dasypus_novemcinctus
ENSDARG00000007175	recql	96	57.166	ENSDORG00000015884	Recql	99	57.166	Dipodomys_ordii
ENSDARG00000007175	recql	96	51.212	ENSETEG00000018631	-	95	51.212	Echinops_telfairi
ENSDARG00000007175	recql	60	49.051	ENSETEG00000018325	-	59	49.051	Echinops_telfairi
ENSDARG00000007175	recql	96	57.305	ENSEASG00005014041	RECQL	93	63.430	Equus_asinus_asinus
ENSDARG00000007175	recql	97	57.532	ENSECAG00000024762	RECQL	85	57.532	Equus_caballus
ENSDARG00000007175	recql	99	73.469	ENSELUG00000011528	recql	99	73.626	Esox_lucius
ENSDARG00000007175	recql	99	58.125	ENSFCAG00000030888	RECQL	96	58.125	Felis_catus
ENSDARG00000007175	recql	96	56.452	ENSFALG00000002635	RECQL	96	56.452	Ficedula_albicollis
ENSDARG00000007175	recql	93	59.365	ENSFDAG00000019693	RECQL	91	59.365	Fukomys_damarensis
ENSDARG00000007175	recql	99	69.640	ENSFHEG00000014563	recql	99	69.640	Fundulus_heteroclitus
ENSDARG00000007175	recql	79	66.403	ENSGMOG00000010504	recql	100	66.403	Gadus_morhua
ENSDARG00000007175	recql	99	56.918	ENSGALG00000013174	RECQL	95	57.233	Gallus_gallus
ENSDARG00000007175	recql	99	68.289	ENSGACG00000001005	recql	99	69.815	Gasterosteus_aculeatus
ENSDARG00000007175	recql	95	58.882	ENSGAGG00000025428	RECQL	92	58.882	Gopherus_agassizii
ENSDARG00000007175	recql	97	57.212	ENSGGOG00000010985	RECQL	95	56.891	Gorilla_gorilla
ENSDARG00000007175	recql	99	69.906	ENSHBUG00000001341	recql	99	70.063	Haplochromis_burtoni
ENSDARG00000007175	recql	99	56.850	ENSHGLG00000009712	RECQL	98	56.850	Heterocephalus_glaber_female
ENSDARG00000007175	recql	98	57.576	ENSHGLG00100015306	RECQL	97	57.576	Heterocephalus_glaber_male
ENSDARG00000007175	recql	97	68.429	ENSHCOG00000012735	recql	98	68.429	Hippocampus_comes
ENSDARG00000007175	recql	100	76.393	ENSIPUG00000024092	recql	100	76.393	Ictalurus_punctatus
ENSDARG00000007175	recql	96	54.221	ENSSTOG00000006328	RECQL	95	54.221	Ictidomys_tridecemlineatus
ENSDARG00000007175	recql	96	56.472	ENSJJAG00000017339	Recql	98	57.718	Jaculus_jaculus
ENSDARG00000007175	recql	99	68.217	ENSKMAG00000011232	recql	99	68.372	Kryptolebias_marmoratus
ENSDARG00000007175	recql	99	68.624	ENSLBEG00000023652	recql	98	68.576	Labrus_bergylta
ENSDARG00000007175	recql	98	57.878	ENSLACG00000011482	RECQL	99	57.878	Latimeria_chalumnae
ENSDARG00000007175	recql	99	50.157	ENSLOCG00000015393	recql	97	50.157	Lepisosteus_oculatus
ENSDARG00000007175	recql	98	57.234	ENSLAFG00000000963	RECQL	96	57.234	Loxodonta_africana
ENSDARG00000007175	recql	97	57.372	ENSMFAG00000031470	RECQL	95	57.630	Macaca_fascicularis
ENSDARG00000007175	recql	97	57.372	ENSMMUG00000010857	RECQL	95	57.372	Macaca_mulatta
ENSDARG00000007175	recql	97	57.372	ENSMNEG00000031827	RECQL	95	57.630	Macaca_nemestrina
ENSDARG00000007175	recql	93	59.197	ENSMLEG00000039659	RECQL	98	59.197	Mandrillus_leucophaeus
ENSDARG00000007175	recql	99	69.423	ENSMAMG00000023289	recql	99	69.423	Mastacembelus_armatus
ENSDARG00000007175	recql	99	70.063	ENSMZEG00005016027	recql	99	70.219	Maylandia_zebra
ENSDARG00000007175	recql	93	59.664	ENSMGAG00000013629	RECQL	96	56.651	Meleagris_gallopavo
ENSDARG00000007175	recql	99	49.150	ENSMAUG00000010642	Recql	97	56.379	Mesocricetus_auratus
ENSDARG00000007175	recql	93	58.863	ENSMICG00000002664	RECQL	91	58.863	Microcebus_murinus
ENSDARG00000007175	recql	99	57.364	ENSMOCG00000007093	Recql	98	57.364	Microtus_ochrogaster
ENSDARG00000007175	recql	98	67.085	ENSMMOG00000007279	recql	99	67.085	Mola_mola
ENSDARG00000007175	recql	95	59.024	ENSMODG00000017805	RECQL	93	59.024	Monodelphis_domestica
ENSDARG00000007175	recql	93	72.848	ENSMALG00000004415	recql	94	72.924	Monopterus_albus
ENSDARG00000007175	recql	99	56.366	MGP_CAROLIEiJ_G0029030	Recql	99	56.719	Mus_caroli
ENSDARG00000007175	recql	99	56.366	ENSMUSG00000030243	Recql	98	56.366	Mus_musculus
ENSDARG00000007175	recql	99	56.386	MGP_PahariEiJ_G0022791	Recql	98	57.460	Mus_pahari
ENSDARG00000007175	recql	99	56.522	MGP_SPRETEiJ_G0030085	Recql	99	56.875	Mus_spretus
ENSDARG00000007175	recql	93	59.532	ENSMPUG00000000202	RECQL	91	59.532	Mustela_putorius_furo
ENSDARG00000007175	recql	96	58.929	ENSMLUG00000005741	RECQL	94	58.929	Myotis_lucifugus
ENSDARG00000007175	recql	99	58.009	ENSNGAG00000010997	-	98	58.009	Nannospalax_galili
ENSDARG00000007175	recql	99	45.116	ENSNGAG00000020417	-	96	45.116	Nannospalax_galili
ENSDARG00000007175	recql	99	69.592	ENSNBRG00000020825	recql	99	70.469	Neolamprologus_brichardi
ENSDARG00000007175	recql	97	57.372	ENSNLEG00000004797	RECQL	91	58.863	Nomascus_leucogenys
ENSDARG00000007175	recql	93	59.532	ENSOPRG00000007493	RECQL	99	59.532	Ochotona_princeps
ENSDARG00000007175	recql	98	56.757	ENSODEG00000010240	RECQL	95	58.983	Octodon_degus
ENSDARG00000007175	recql	99	70.533	ENSONIG00000001694	recql	99	70.690	Oreochromis_niloticus
ENSDARG00000007175	recql	56	36.104	ENSOANG00000021930	-	100	38.109	Ornithorhynchus_anatinus
ENSDARG00000007175	recql	93	59.833	ENSOCUG00000008787	RECQL	91	59.833	Oryctolagus_cuniculus
ENSDARG00000007175	recql	97	66.401	ENSORLG00000012853	recql	99	63.447	Oryzias_latipes
ENSDARG00000007175	recql	99	65.839	ENSORLG00020020245	recql	99	66.460	Oryzias_latipes_hni
ENSDARG00000007175	recql	99	65.994	ENSORLG00015018708	recql	99	66.615	Oryzias_latipes_hsok
ENSDARG00000007175	recql	99	65.987	ENSOMEG00000019484	recql	98	67.085	Oryzias_melastigma
ENSDARG00000007175	recql	92	59.423	ENSOGAG00000004754	RECQL	90	59.423	Otolemur_garnettii
ENSDARG00000007175	recql	93	59.699	ENSOARG00000020343	RECQL	91	59.699	Ovis_aries
ENSDARG00000007175	recql	86	60.436	ENSPPAG00000030306	RECQL	94	57.002	Pan_paniscus
ENSDARG00000007175	recql	99	58.281	ENSPPRG00000010371	RECQL	96	58.281	Panthera_pardus
ENSDARG00000007175	recql	98	58.703	ENSPTIG00000008593	RECQL	96	58.703	Panthera_tigris_altaica
ENSDARG00000007175	recql	97	57.372	ENSPTRG00000004758	RECQL	93	57.305	Pan_troglodytes
ENSDARG00000007175	recql	97	57.212	ENSPANG00000003394	RECQL	95	57.468	Papio_anubis
ENSDARG00000007175	recql	99	71.317	ENSPKIG00000008072	recql	99	71.317	Paramormyrops_kingsleyae
ENSDARG00000007175	recql	96	58.862	ENSPSIG00000002979	RECQL	92	58.966	Pelodiscus_sinensis
ENSDARG00000007175	recql	99	65.781	ENSPMGG00000011010	recql	98	65.781	Periophthalmus_magnuspinnatus
ENSDARG00000007175	recql	99	56.677	ENSPEMG00000016418	Recql	98	59.038	Peromyscus_maniculatus_bairdii
ENSDARG00000007175	recql	91	53.152	ENSPMAG00000005495	recql	96	53.152	Petromyzon_marinus
ENSDARG00000007175	recql	97	58.147	ENSPCIG00000022452	RECQL	94	57.987	Phascolarctos_cinereus
ENSDARG00000007175	recql	99	68.770	ENSPFOG00000000940	recql	96	68.770	Poecilia_formosa
ENSDARG00000007175	recql	99	68.612	ENSPLAG00000006194	recql	96	68.612	Poecilia_latipinna
ENSDARG00000007175	recql	99	68.396	ENSPMEG00000013399	recql	96	68.396	Poecilia_mexicana
ENSDARG00000007175	recql	99	68.612	ENSPREG00000012991	recql	98	68.612	Poecilia_reticulata
ENSDARG00000007175	recql	97	57.212	ENSPPYG00000004352	RECQL	95	56.891	Pongo_abelii
ENSDARG00000007175	recql	88	57.812	ENSPCOG00000027353	RECQL	95	57.812	Propithecus_coquereli
ENSDARG00000007175	recql	89	59.511	ENSPVAG00000002457	RECQL	88	59.511	Pteropus_vampyrus
ENSDARG00000007175	recql	99	70.219	ENSPNYG00000016013	recql	99	70.376	Pundamilia_nyererei
ENSDARG00000007175	recql	99	80.093	ENSPNAG00000029317	recql	99	80.093	Pygocentrus_nattereri
ENSDARG00000007175	recql	96	58.023	ENSRNOG00000012602	Recql	96	62.146	Rattus_norvegicus
ENSDARG00000007175	recql	97	57.372	ENSRBIG00000034966	RECQL	95	57.630	Rhinopithecus_bieti
ENSDARG00000007175	recql	97	57.372	ENSRROG00000010234	RECQL	95	57.630	Rhinopithecus_roxellana
ENSDARG00000007175	recql	99	55.969	ENSSBOG00000005645	RECQL	98	55.969	Saimiri_boliviensis_boliviensis
ENSDARG00000007175	recql	98	58.188	ENSSHAG00000015815	RECQL	95	58.188	Sarcophilus_harrisii
ENSDARG00000007175	recql	99	71.384	ENSSFOG00015002537	recql	98	71.384	Scleropages_formosus
ENSDARG00000007175	recql	99	69.861	ENSSMAG00000014910	recql	99	69.861	Scophthalmus_maximus
ENSDARG00000007175	recql	99	70.938	ENSSDUG00000019205	recql	98	71.406	Seriola_dumerili
ENSDARG00000007175	recql	99	70.938	ENSSLDG00000013921	recql	98	71.406	Seriola_lalandi_dorsalis
ENSDARG00000007175	recql	92	46.622	ENSSPUG00000018613	RECQL	97	45.677	Sphenodon_punctatus
ENSDARG00000007175	recql	99	71.317	ENSSPAG00000008384	recql	99	71.317	Stegastes_partitus
ENSDARG00000007175	recql	99	58.740	ENSSSCG00000000580	RECQL	96	62.548	Sus_scrofa
ENSDARG00000007175	recql	98	56.000	ENSTGUG00000011730	RECQL	95	56.467	Taeniopygia_guttata
ENSDARG00000007175	recql	93	66.667	ENSTRUG00000000534	recql	99	68.271	Takifugu_rubripes
ENSDARG00000007175	recql	99	64.219	ENSTNIG00000007242	recql	96	67.105	Tetraodon_nigroviridis
ENSDARG00000007175	recql	77	59.356	ENSTBEG00000004653	RECQL	76	59.356	Tupaia_belangeri
ENSDARG00000007175	recql	83	61.732	ENSTTRG00000003296	RECQL	81	61.732	Tursiops_truncatus
ENSDARG00000007175	recql	97	57.395	ENSUAMG00000003261	RECQL	96	57.395	Ursus_americanus
ENSDARG00000007175	recql	99	57.390	ENSUMAG00000001523	RECQL	97	57.390	Ursus_maritimus
ENSDARG00000007175	recql	85	61.749	ENSVPAG00000007546	RECQL	85	61.749	Vicugna_pacos
ENSDARG00000007175	recql	99	57.698	ENSVVUG00000001101	RECQL	98	57.698	Vulpes_vulpes
ENSDARG00000007175	recql	78	58.283	ENSXETG00000013524	recql	96	58.283	Xenopus_tropicalis
ENSDARG00000007175	recql	99	67.508	ENSXMAG00000029316	recql	98	67.666	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005694	chromosome	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0006310	DNA recombination	21873635.	IBA	Process
GO:0006310	DNA recombination	-	IEA	Process
GO:0008026	ATP-dependent helicase activity	-	IEA	Function
GO:0009378	four-way junction helicase activity	21873635.	IBA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	IEA	Function