EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000007257 (Gene tree)
Gene ID
393945
Gene Symbol
rab5ab
Alias
rab5al
Full Name
RAB5A%2C member RAS oncogene family%2C b
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
14005 bases
Position
chr16:49647402-49661406
Accession
ZDB-GENE-040122-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000010427MMR_HSR1PF01926.230.0002511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000015694-1279-ENSDARP00000010427216 (aa)-Q7ZUG4
ENSDART00000132547-823-ENSDARP00000123595128 (aa)-E9QBQ1
Gene Model
Click here to download ENSDARG00000007257's gene model file
Pathways
Pathway IDPathway NameSource
dre04144EndocytosisKEGG
dre04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000007257's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000007257rab5ab8940.513ENSDARG00000055291rab18a9340.513
ENSDARG00000007257rab5ab8932.836ENSDARG00000103391rab9b9732.836
ENSDARG00000007257rab5ab7540.373ENSDARG00000020261rab2a9736.190
ENSDARG00000007257rab5ab7732.335ENSDARG00000013161zgc:555588832.335
ENSDARG00000007257rab5ab8137.778ENSDARG00000089428rab127737.778
ENSDARG00000007257rab5ab8943.299ENSDARG00000056479rab1bb9643.299
ENSDARG00000007257rab5ab9039.901ENSDARG00000041450rab11a9439.901
ENSDARG00000007257rab5ab8938.119ENSDARG00000074246rab149438.119
ENSDARG00000007257rab5ab7640.588ENSDARG00000021287rab7b8340.588
ENSDARG00000007257rab5ab7546.012ENSDARG00000014340rab11al7546.012
ENSDARG00000007257rab5ab7535.366ENSDARG00000019312rab39ba7735.366
ENSDARG00000007257rab5ab8940.000ENSDARG00000098344rab18b9340.000
ENSDARG00000007257rab5ab8942.574ENSDARG00000058800rab25a9442.574
ENSDARG00000007257rab5ab7235.443ENSDARG00000102580CU571310.17535.443
ENSDARG00000007257rab5ab8943.000ENSDARG00000052954rab25b9443.000
ENSDARG00000007257rab5ab8331.111ENSDARG00000038225nras9431.111
ENSDARG00000007257rab5ab8944.041ENSDARG00000052263rab1aa9644.041
ENSDARG00000007257rab5ab7737.430ENSDARG00000052290rab33ba7537.430
ENSDARG00000007257rab5ab8833.333ENSDARG00000034215rab42a8933.333
ENSDARG00000007257rab5ab7440.881ENSDARG00000102078CABZ01072548.18140.881
ENSDARG00000007257rab5ab9237.073ENSDARG00000020497rab7a9937.073
ENSDARG00000007257rab5ab8937.313ENSDARG00000003257zgc:1015598437.313
ENSDARG00000007257rab5ab7533.540ENSDARG00000004151rab237334.682
ENSDARG00000007257rab5ab8943.814ENSDARG00000029663rab1ab9643.814
ENSDARG00000007257rab5ab7332.353ENSDARG00000010977rab34b7532.292
ENSDARG00000007257rab5ab5531.967ENSDARG00000078686arl8a6231.967
ENSDARG00000007257rab5ab8931.068ENSDARG00000014058rab367931.068
ENSDARG00000007257rab5ab8330.481ENSDARG00000098497hrasa9830.481
ENSDARG00000007257rab5ab7234.194ENSDARG00000063321rabl26934.194
ENSDARG00000007257rab5ab8542.077ENSDARG00000029885rab418742.077
ENSDARG00000007257rab5ab7534.911ENSDARG00000045027rab9a8234.911
ENSDARG00000007257rab5ab8941.176ENSDARG00000041878rab11ba9940.594
ENSDARG00000007257rab5ab8937.129ENSDARG00000035188rab14l9437.129
ENSDARG00000007257rab5ab7740.698ENSDARG00000087243zgc:1009188340.698
ENSDARG00000007257rab5ab8938.974ENSDARG00000034771rab139538.974
ENSDARG00000007257rab5ab7535.366ENSDARG00000036501rab39bb7735.366
ENSDARG00000007257rab5ab8837.436ENSDARG00000026098si:dkey-13a21.49337.436
ENSDARG00000007257rab5ab8143.429ENSDARG00000031343rab6bb8443.429
ENSDARG00000007257rab5ab7553.374ENSDARG00000015807rab22a8353.374
ENSDARG00000007257rab5ab7542.236ENSDARG00000103934megf89342.236
ENSDARG00000007257rab5ab9239.899ENSDARG00000103714rab6a9339.899
ENSDARG00000007257rab5ab8441.989ENSDARG00000033056zgc:1719278441.989
ENSDARG00000007257rab5ab8936.683ENSDARG00000057394rab33a8436.683
ENSDARG00000007257rab5ab5833.333ENSDARG00000006915arl8ba6533.333
ENSDARG00000007257rab5ab9042.500ENSDARG00000037884rab309642.500
ENSDARG00000007257rab5ab7842.262ENSDARG00000037967si:dkey-16l2.169639.303
ENSDARG00000007257rab5ab8144.571ENSDARG00000034522rab6ba8444.571
ENSDARG00000007257rab5ab8941.176ENSDARG00000090086rab11bb9441.176
ENSDARG00000007257rab5ab7631.325ENSDARG00000010844kras9030.409
ENSDARG00000007257rab5ab8934.826ENSDARG00000114797rab3b9034.826
ENSDARG00000007257rab5ab9993.953ENSDARG00000018602rab5aa9993.953
ENSDARG00000007257rab5ab5833.333ENSDARG00000070318arl8bb6533.333
ENSDARG00000007257rab5ab8938.974ENSDARG00000058425rab35b9638.974
ENSDARG00000007257rab5ab7441.509ENSDARG00000026484rab157541.509
ENSDARG00000007257rab5ab6730.822ENSDARG00000005651hrasb10030.822
ENSDARG00000007257rab5ab8943.299ENSDARG00000058044rab1ba9843.299
ENSDARG00000007257rab5ab9732.381ENSDARG00000005049rab207832.381
ENSDARG00000007257rab5ab7334.375ENSDARG00000045628rab34a6634.375
ENSDARG00000007257rab5ab6238.806ENSDARG00000018107rab3da8038.806
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000007257rab5ab9992.093ENSG00000144566RAB5A9992.093Homo_sapiens
ENSDARG00000007257rab5ab9993.023ENSAPOG00000021391rab5aa9993.023Acanthochromis_polyacanthus
ENSDARG00000007257rab5ab9992.093ENSAMEG00000000954RAB5A9992.093Ailuropoda_melanoleuca
ENSDARG00000007257rab5ab9994.419ENSACIG00000019251rab5aa9994.419Amphilophus_citrinellus
ENSDARG00000007257rab5ab9993.953ENSAOCG00000000090rab5aa9993.953Amphiprion_ocellaris
ENSDARG00000007257rab5ab9993.953ENSAPEG00000013376rab5aa9993.953Amphiprion_percula
ENSDARG00000007257rab5ab9994.419ENSATEG00000014748rab5aa9994.419Anabas_testudineus
ENSDARG00000007257rab5ab9991.628ENSACAG00000000017RAB5A9991.628Anolis_carolinensis
ENSDARG00000007257rab5ab9992.093ENSANAG00000025120RAB5A9992.093Aotus_nancymaae
ENSDARG00000007257rab5ab9994.419ENSACLG00000018066rab5aa9994.419Astatotilapia_calliptera
ENSDARG00000007257rab5ab9993.023ENSAMXG00000036179rab5aa9993.023Astyanax_mexicanus
ENSDARG00000007257rab5ab9995.833ENSAMXG00000035919rab5ab9995.833Astyanax_mexicanus
ENSDARG00000007257rab5ab9991.628ENSBTAG00000046385RAB5A9991.628Bos_taurus
ENSDARG00000007257rab5ab9992.093ENSCJAG00000048394RAB5A9992.093Callithrix_jacchus
ENSDARG00000007257rab5ab9992.093ENSCAFG00000005814RAB5A9992.093Canis_familiaris
ENSDARG00000007257rab5ab9992.093ENSCAFG00020027287RAB5A9992.093Canis_lupus_dingo
ENSDARG00000007257rab5ab9991.163ENSCHIG00000025419-9991.163Capra_hircus
ENSDARG00000007257rab5ab9787.619ENSTSYG00000030238-9887.619Carlito_syrichta
ENSDARG00000007257rab5ab9992.093ENSTSYG00000007642-9992.093Carlito_syrichta
ENSDARG00000007257rab5ab9992.093ENSCCAG00000022405RAB5A9992.093Cebus_capucinus
ENSDARG00000007257rab5ab9992.093ENSCATG00000033588-9992.093Cercocebus_atys
ENSDARG00000007257rab5ab9991.628ENSCLAG00000006053-9991.628Chinchilla_lanigera
ENSDARG00000007257rab5ab9992.093ENSCSAG00000009831RAB5A9992.093Chlorocebus_sabaeus
ENSDARG00000007257rab5ab9992.093ENSCPBG00000022559RAB5A9992.093Chrysemys_picta_bellii
ENSDARG00000007257rab5ab9992.093ENSCANG00000043514RAB5A9992.093Colobus_angolensis_palliatus
ENSDARG00000007257rab5ab9992.558ENSCGRG00001020018-9992.558Cricetulus_griseus_chok1gshd
ENSDARG00000007257rab5ab9992.558ENSCGRG00000002786-9992.558Cricetulus_griseus_crigri
ENSDARG00000007257rab5ab10092.593ENSCVAG00000008239rab5aa10092.593Cyprinodon_variegatus
ENSDARG00000007257rab5ab9991.628ENSDNOG00000038467RAB5A9991.628Dasypus_novemcinctus
ENSDARG00000007257rab5ab9992.093ENSDORG00000024958-9992.093Dipodomys_ordii
ENSDARG00000007257rab5ab9992.093ENSEASG00005005818RAB5A9992.093Equus_asinus_asinus
ENSDARG00000007257rab5ab9992.093ENSECAG00000019062RAB5A9992.093Equus_caballus
ENSDARG00000007257rab5ab9992.093ENSEEUG00000009044RAB5A9992.093Erinaceus_europaeus
ENSDARG00000007257rab5ab10094.444ENSELUG00000013436rab5ab10094.444Esox_lucius
ENSDARG00000007257rab5ab9992.558ENSELUG00000006462rab5aa9992.558Esox_lucius
ENSDARG00000007257rab5ab9992.093ENSFCAG00000039795-9992.093Felis_catus
ENSDARG00000007257rab5ab9992.093ENSFALG00000009239RAB5A9992.093Ficedula_albicollis
ENSDARG00000007257rab5ab9991.163ENSFDAG00000005631-9991.163Fukomys_damarensis
ENSDARG00000007257rab5ab10093.519ENSFHEG00000014070rab5aa10093.519Fundulus_heteroclitus
ENSDARG00000007257rab5ab8494.475ENSGMOG00000007127RAB5A9994.475Gadus_morhua
ENSDARG00000007257rab5ab10091.667ENSGMOG00000002868rab5aa10091.667Gadus_morhua
ENSDARG00000007257rab5ab9991.628ENSGALG00000011272RAB5A9991.628Gallus_gallus
ENSDARG00000007257rab5ab10093.056ENSGAFG00000011619rab5aa10093.056Gambusia_affinis
ENSDARG00000007257rab5ab9991.628ENSGACG00000004997rab5aa9991.628Gasterosteus_aculeatus
ENSDARG00000007257rab5ab9992.558ENSGAGG00000005319RAB5A9992.558Gopherus_agassizii
ENSDARG00000007257rab5ab9992.093ENSGGOG00000015981RAB5A9992.093Gorilla_gorilla
ENSDARG00000007257rab5ab9994.419ENSHBUG00000003752rab5aa9994.419Haplochromis_burtoni
ENSDARG00000007257rab5ab9693.750ENSHGLG00000006357-9993.750Heterocephalus_glaber_female
ENSDARG00000007257rab5ab9985.047ENSHGLG00000017749-9685.047Heterocephalus_glaber_female
ENSDARG00000007257rab5ab9985.514ENSHGLG00100008816-9685.514Heterocephalus_glaber_male
ENSDARG00000007257rab5ab9992.093ENSHGLG00100007553RAB5A9992.093Heterocephalus_glaber_male
ENSDARG00000007257rab5ab9993.981ENSIPUG00000023392rab5a9993.981Ictalurus_punctatus
ENSDARG00000007257rab5ab9991.628ENSSTOG00000026229RAB5A9991.628Ictidomys_tridecemlineatus
ENSDARG00000007257rab5ab9991.163ENSJJAG00000020190Rab5a9991.163Jaculus_jaculus
ENSDARG00000007257rab5ab9992.093ENSKMAG00000005111rab5aa9992.093Kryptolebias_marmoratus
ENSDARG00000007257rab5ab9991.628ENSLBEG00000002516rab5aa9591.628Labrus_bergylta
ENSDARG00000007257rab5ab9991.163ENSLACG00000004663RAB5A9991.163Latimeria_chalumnae
ENSDARG00000007257rab5ab9993.488ENSLOCG00000006591rab5ab9993.488Lepisosteus_oculatus
ENSDARG00000007257rab5ab9991.628ENSLAFG00000008321RAB5A9991.628Loxodonta_africana
ENSDARG00000007257rab5ab9992.093ENSMFAG00000002326RAB5A9992.093Macaca_fascicularis
ENSDARG00000007257rab5ab8395.556ENSMMUG00000006992RAB5A9195.556Macaca_mulatta
ENSDARG00000007257rab5ab6992.667ENSMMUG00000032398-8792.667Macaca_mulatta
ENSDARG00000007257rab5ab9992.093ENSMNEG00000039149-9992.093Macaca_nemestrina
ENSDARG00000007257rab5ab9992.093ENSMLEG00000028944RAB5A9992.093Mandrillus_leucophaeus
ENSDARG00000007257rab5ab9994.419ENSMAMG00000012573rab5aa9994.419Mastacembelus_armatus
ENSDARG00000007257rab5ab9994.419ENSMZEG00005005205rab5aa9994.419Maylandia_zebra
ENSDARG00000007257rab5ab9992.093ENSMGAG00000010961RAB5A9992.093Meleagris_gallopavo
ENSDARG00000007257rab5ab9993.023ENSMAUG00000011242-9993.023Mesocricetus_auratus
ENSDARG00000007257rab5ab9992.093ENSMICG00000049130RAB5A9992.093Microcebus_murinus
ENSDARG00000007257rab5ab9993.023ENSMOCG00000009706Rab5a9993.023Microtus_ochrogaster
ENSDARG00000007257rab5ab9993.023ENSMMOG00000019135rab5aa9993.023Mola_mola
ENSDARG00000007257rab5ab9991.628ENSMODG00000014793RAB5A9795.000Monodelphis_domestica
ENSDARG00000007257rab5ab9991.163ENSMALG00000014929rab5aa9991.163Monopterus_albus
ENSDARG00000007257rab5ab9993.023MGP_CAROLIEiJ_G0021741Rab5a9895.556Mus_caroli
ENSDARG00000007257rab5ab9993.023ENSMUSG00000017831Rab5a9993.023Mus_musculus
ENSDARG00000007257rab5ab8892.105MGP_PahariEiJ_G0020730Rab5a10092.105Mus_pahari
ENSDARG00000007257rab5ab9992.093ENSMPUG00000013147RAB5A9992.093Mustela_putorius_furo
ENSDARG00000007257rab5ab9992.093ENSMLUG00000011716RAB5A9992.093Myotis_lucifugus
ENSDARG00000007257rab5ab9992.093ENSNGAG00000021245-9992.093Nannospalax_galili
ENSDARG00000007257rab5ab9994.419ENSNBRG00000011763rab5aa9994.419Neolamprologus_brichardi
ENSDARG00000007257rab5ab9992.093ENSNLEG00000003434RAB5A9992.093Nomascus_leucogenys
ENSDARG00000007257rab5ab8295.506ENSOPRG00000011278RAB5A10095.506Ochotona_princeps
ENSDARG00000007257rab5ab6896.599ENSODEG00000000290-9996.599Octodon_degus
ENSDARG00000007257rab5ab8785.789ENSODEG00000019065-9985.789Octodon_degus
ENSDARG00000007257rab5ab9994.884ENSONIG00000002425rab5aa9994.884Oreochromis_niloticus
ENSDARG00000007257rab5ab10091.204ENSOANG00000004989RAB5A9891.204Ornithorhynchus_anatinus
ENSDARG00000007257rab5ab9991.628ENSOCUG00000012200RAB5A9991.628Oryctolagus_cuniculus
ENSDARG00000007257rab5ab9993.023ENSORLG00000012261rab5aa9993.023Oryzias_latipes
ENSDARG00000007257rab5ab9993.023ENSORLG00020020922rab5aa9993.023Oryzias_latipes_hni
ENSDARG00000007257rab5ab9993.023ENSORLG00015012854rab5aa9993.023Oryzias_latipes_hsok
ENSDARG00000007257rab5ab9994.884ENSORLG00015017737rab5ab9994.884Oryzias_latipes_hsok
ENSDARG00000007257rab5ab9993.023ENSOMEG00000010692rab5aa9993.023Oryzias_melastigma
ENSDARG00000007257rab5ab9991.163ENSOARG00000015722RAB5A9991.163Ovis_aries
ENSDARG00000007257rab5ab9991.667ENSPPAG00000041763RAB5A9991.667Pan_paniscus
ENSDARG00000007257rab5ab9992.093ENSPPRG00000001655-9992.093Panthera_pardus
ENSDARG00000007257rab5ab9992.093ENSPTIG00000021685RAB5A9992.093Panthera_tigris_altaica
ENSDARG00000007257rab5ab9991.667ENSPTRG00000014682RAB5A9991.667Pan_troglodytes
ENSDARG00000007257rab5ab9992.093ENSPANG00000001328RAB5A9992.093Papio_anubis
ENSDARG00000007257rab5ab9993.953ENSPKIG00000009578rab5ab9993.953Paramormyrops_kingsleyae
ENSDARG00000007257rab5ab9988.837ENSPKIG00000010291RAB5A9988.837Paramormyrops_kingsleyae
ENSDARG00000007257rab5ab9993.023ENSPSIG00000007157RAB5A9993.023Pelodiscus_sinensis
ENSDARG00000007257rab5ab9993.953ENSPMGG00000001915rab5aa9993.953Periophthalmus_magnuspinnatus
ENSDARG00000007257rab5ab9992.558ENSPCIG00000018321RAB5A9992.558Phascolarctos_cinereus
ENSDARG00000007257rab5ab10093.519ENSPFOG00000011263rab5aa10093.519Poecilia_formosa
ENSDARG00000007257rab5ab10093.519ENSPLAG00000017838rab5aa10093.519Poecilia_latipinna
ENSDARG00000007257rab5ab10093.519ENSPMEG00000007238rab5aa10093.519Poecilia_mexicana
ENSDARG00000007257rab5ab9992.093ENSPPYG00000014074RAB5A9992.093Pongo_abelii
ENSDARG00000007257rab5ab9992.093ENSPCOG00000013289RAB5A9992.093Propithecus_coquereli
ENSDARG00000007257rab5ab9991.628ENSPVAG00000006730RAB5A9991.628Pteropus_vampyrus
ENSDARG00000007257rab5ab9994.419ENSPNYG00000010612rab5aa9994.419Pundamilia_nyererei
ENSDARG00000007257rab5ab9995.370ENSPNAG00000009496rab5ab9995.370Pygocentrus_nattereri
ENSDARG00000007257rab5ab9993.023ENSPNAG00000023223rab5aa9993.023Pygocentrus_nattereri
ENSDARG00000007257rab5ab9992.093ENSRBIG00000036122RAB5A9992.093Rhinopithecus_bieti
ENSDARG00000007257rab5ab9992.093ENSRROG00000037687RAB5A9992.093Rhinopithecus_roxellana
ENSDARG00000007257rab5ab9992.130ENSSHAG00000006787RAB5A9992.130Sarcophilus_harrisii
ENSDARG00000007257rab5ab9992.093ENSSFOG00015021115-9992.093Scleropages_formosus
ENSDARG00000007257rab5ab9993.953ENSSFOG00015014517rab5a9993.953Scleropages_formosus
ENSDARG00000007257rab5ab9993.023ENSSMAG00000009229rab5aa9993.023Scophthalmus_maximus
ENSDARG00000007257rab5ab9993.953ENSSDUG00000009835rab5aa9993.953Seriola_dumerili
ENSDARG00000007257rab5ab9993.953ENSSLDG00000011069rab5aa9993.953Seriola_lalandi_dorsalis
ENSDARG00000007257rab5ab8795.745ENSSPUG00000001173RAB5A9695.745Sphenodon_punctatus
ENSDARG00000007257rab5ab9993.023ENSSPAG00000015678rab5aa9993.023Stegastes_partitus
ENSDARG00000007257rab5ab9991.163ENSSSCG00000037653RAB5A9991.163Sus_scrofa
ENSDARG00000007257rab5ab9992.093ENSTGUG00000003236RAB5A9992.093Taeniopygia_guttata
ENSDARG00000007257rab5ab10092.593ENSTRUG00000024368rab5aa10092.593Takifugu_rubripes
ENSDARG00000007257rab5ab9992.093ENSTNIG00000009196rab5aa9992.093Tetraodon_nigroviridis
ENSDARG00000007257rab5ab9992.093ENSTTRG00000001374RAB5A9992.093Tursiops_truncatus
ENSDARG00000007257rab5ab9986.463ENSUAMG00000027471RAB5A9994.022Ursus_americanus
ENSDARG00000007257rab5ab9992.093ENSUMAG00000018295RAB5A9992.093Ursus_maritimus
ENSDARG00000007257rab5ab9992.093ENSVVUG00000000489RAB5A9992.093Vulpes_vulpes
ENSDARG00000007257rab5ab9991.163ENSXETG00000002305rab5a9991.163Xenopus_tropicalis
ENSDARG00000007257rab5ab10093.056ENSXCOG00000020121rab5aa10093.056Xiphophorus_couchianus
ENSDARG00000007257rab5ab10093.519ENSXMAG00000028889rab5aa10093.519Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity-IEAFunction
GO:0005525GTP binding-IEAFunction
GO:0005768endosome21873635.IBAComponent
GO:0005769early endosome21873635.IBAComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0006897endocytosis21873635.IBAProcess
GO:0006897endocytosis25478908.IMPProcess
GO:0030100regulation of endocytosis21873635.IBAProcess
GO:0030139endocytic vesicle21873635.IBAComponent
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0038092nodal signaling pathway25478908.IMPProcess
GO:0055113epiboly involved in gastrulation with mouth forming second25478908.IMPProcess
GO:0060061Spemann organizer formation25478908.IMPProcess

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