EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000007734 (Gene tree)
Gene ID: 393360
Gene Symbol: stn1
Alias: obfc1|zgc:64174
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 13597 bases
Position: chr1:47499888-47513484
Accession: ZDB-GENE-040426-1390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000013967	tRNA_anti-codon	PF01336.25	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000027624	-	1495	-	ENSDARP00000013967	368 (aa)	-	B8JKF4

Gene Model

Click here to download ENSDARG00000007734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000007734's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000007734	stn1	96	44.959	ENSG00000107960	STN1	97	44.959	Homo_sapiens
ENSDARG00000007734	stn1	96	44.628	ENSAMEG00000017971	STN1	96	44.262	Ailuropoda_melanoleuca
ENSDARG00000007734	stn1	97	44.837	ENSAPLG00000006661	STN1	98	44.837	Anas_platyrhynchos
ENSDARG00000007734	stn1	97	43.562	ENSACAG00000004954	STN1	97	43.562	Anolis_carolinensis
ENSDARG00000007734	stn1	96	43.869	ENSANAG00000038147	STN1	97	44.865	Aotus_nancymaae
ENSDARG00000007734	stn1	96	44.142	ENSBTAG00000015019	STN1	97	44.142	Bos_taurus
ENSDARG00000007734	stn1	96	43.597	ENSCJAG00000040388	STN1	97	43.597	Callithrix_jacchus
ENSDARG00000007734	stn1	96	44.414	ENSCAFG00000010483	STN1	97	44.414	Canis_familiaris
ENSDARG00000007734	stn1	96	44.414	ENSCAFG00020010650	STN1	97	44.414	Canis_lupus_dingo
ENSDARG00000007734	stn1	96	44.142	ENSCHIG00000019425	-	97	44.142	Capra_hircus
ENSDARG00000007734	stn1	96	43.370	ENSCHIG00000003253	-	95	43.370	Capra_hircus
ENSDARG00000007734	stn1	87	41.088	ENSCAPG00000016278	STN1	99	41.088	Cavia_aperea
ENSDARG00000007734	stn1	96	43.597	ENSCPOG00000006273	STN1	95	43.597	Cavia_porcellus
ENSDARG00000007734	stn1	96	43.597	ENSCCAG00000020507	STN1	97	44.959	Cebus_capucinus
ENSDARG00000007734	stn1	96	44.687	ENSCATG00000043103	STN1	97	44.687	Cercocebus_atys
ENSDARG00000007734	stn1	98	44.205	ENSCLAG00000001617	STN1	96	44.205	Chinchilla_lanigera
ENSDARG00000007734	stn1	96	44.687	ENSCSAG00000005318	STN1	97	44.687	Chlorocebus_sabaeus
ENSDARG00000007734	stn1	97	45.902	ENSCPBG00000024481	STN1	97	45.902	Chrysemys_picta_bellii
ENSDARG00000007734	stn1	96	45.504	ENSCANG00000029004	STN1	97	45.504	Colobus_angolensis_palliatus
ENSDARG00000007734	stn1	97	43.697	ENSCGRG00001023175	Stn1	95	43.697	Cricetulus_griseus_chok1gshd
ENSDARG00000007734	stn1	97	43.784	ENSCGRG00000004324	Stn1	95	43.784	Cricetulus_griseus_crigri
ENSDARG00000007734	stn1	83	42.857	ENSDNOG00000011022	STN1	96	42.857	Dasypus_novemcinctus
ENSDARG00000007734	stn1	96	43.681	ENSDORG00000005994	Stn1	98	43.902	Dipodomys_ordii
ENSDARG00000007734	stn1	97	40.214	ENSETEG00000013967	STN1	97	40.214	Echinops_telfairi
ENSDARG00000007734	stn1	97	45.405	ENSEASG00005015134	STN1	98	45.405	Equus_asinus_asinus
ENSDARG00000007734	stn1	97	44.595	ENSECAG00000023477	STN1	98	45.405	Equus_caballus
ENSDARG00000007734	stn1	95	42.340	ENSFCAG00000030378	STN1	97	43.562	Felis_catus
ENSDARG00000007734	stn1	97	45.304	ENSFALG00000008791	STN1	97	45.304	Ficedula_albicollis
ENSDARG00000007734	stn1	98	42.049	ENSFDAG00000007528	STN1	96	42.049	Fukomys_damarensis
ENSDARG00000007734	stn1	97	45.604	ENSGALG00000008304	STN1	98	45.604	Gallus_gallus
ENSDARG00000007734	stn1	76	43.051	ENSGAGG00000003673	STN1	86	43.051	Gopherus_agassizii
ENSDARG00000007734	stn1	96	43.869	ENSGGOG00000008979	STN1	97	43.869	Gorilla_gorilla
ENSDARG00000007734	stn1	99	42.553	ENSHGLG00000002775	OBFC1	97	42.553	Heterocephalus_glaber_female
ENSDARG00000007734	stn1	99	42.553	ENSHGLG00100012701	STN1	97	42.553	Heterocephalus_glaber_male
ENSDARG00000007734	stn1	97	55.402	ENSHCOG00000002048	stn1	98	55.402	Hippocampus_comes
ENSDARG00000007734	stn1	96	42.391	ENSSTOG00000011905	STN1	95	42.935	Ictidomys_tridecemlineatus
ENSDARG00000007734	stn1	97	42.896	ENSJJAG00000020389	Stn1	96	42.896	Jaculus_jaculus
ENSDARG00000007734	stn1	98	40.642	ENSLACG00000012381	STN1	99	40.642	Latimeria_chalumnae
ENSDARG00000007734	stn1	96	44.231	ENSLAFG00000004232	STN1	96	43.902	Loxodonta_africana
ENSDARG00000007734	stn1	96	43.869	ENSMFAG00000041817	STN1	97	43.869	Macaca_fascicularis
ENSDARG00000007734	stn1	96	43.869	ENSMMUG00000015323	STN1	97	43.869	Macaca_mulatta
ENSDARG00000007734	stn1	96	43.869	ENSMNEG00000031906	STN1	97	43.869	Macaca_nemestrina
ENSDARG00000007734	stn1	96	43.869	ENSMLEG00000040619	STN1	97	43.869	Mandrillus_leucophaeus
ENSDARG00000007734	stn1	97	44.231	ENSMGAG00000010550	STN1	96	44.231	Meleagris_gallopavo
ENSDARG00000007734	stn1	96	42.935	ENSMAUG00000015671	Stn1	95	42.935	Mesocricetus_auratus
ENSDARG00000007734	stn1	97	45.405	ENSMICG00000012547	STN1	98	45.405	Microcebus_murinus
ENSDARG00000007734	stn1	96	38.693	ENSMOCG00000009637	Stn1	95	38.693	Microtus_ochrogaster
ENSDARG00000007734	stn1	96	41.509	ENSMODG00000011003	STN1	97	41.509	Monodelphis_domestica
ENSDARG00000007734	stn1	96	42.507	MGP_CAROLIEiJ_G0023057	Stn1	95	42.507	Mus_caroli
ENSDARG00000007734	stn1	96	42.234	ENSMUSG00000042694	Stn1	95	42.234	Mus_musculus
ENSDARG00000007734	stn1	96	42.896	MGP_PahariEiJ_G0014547	Stn1	95	42.896	Mus_pahari
ENSDARG00000007734	stn1	96	42.779	MGP_SPRETEiJ_G0023978	Stn1	95	42.779	Mus_spretus
ENSDARG00000007734	stn1	96	43.360	ENSMPUG00000016800	STN1	97	43.360	Mustela_putorius_furo
ENSDARG00000007734	stn1	97	42.973	ENSMLUG00000002037	STN1	96	42.973	Myotis_lucifugus
ENSDARG00000007734	stn1	97	43.089	ENSNGAG00000023986	Stn1	96	43.089	Nannospalax_galili
ENSDARG00000007734	stn1	96	43.869	ENSNLEG00000015282	STN1	97	43.869	Nomascus_leucogenys
ENSDARG00000007734	stn1	97	42.935	ENSOPRG00000010707	STN1	97	42.935	Ochotona_princeps
ENSDARG00000007734	stn1	98	40.701	ENSODEG00000007270	STN1	96	40.701	Octodon_degus
ENSDARG00000007734	stn1	96	43.324	ENSOANG00000001628	STN1	97	43.324	Ornithorhynchus_anatinus
ENSDARG00000007734	stn1	97	43.360	ENSOCUG00000003028	STN1	96	43.902	Oryctolagus_cuniculus
ENSDARG00000007734	stn1	97	57.778	ENSORLG00000002353	stn1	99	57.983	Oryzias_latipes
ENSDARG00000007734	stn1	97	58.564	ENSORLG00020012935	stn1	98	58.564	Oryzias_latipes_hni
ENSDARG00000007734	stn1	97	58.333	ENSORLG00015012154	stn1	98	58.333	Oryzias_latipes_hsok
ENSDARG00000007734	stn1	97	42.400	ENSOGAG00000008722	STN1	96	42.400	Otolemur_garnettii
ENSDARG00000007734	stn1	96	44.142	ENSOARG00000004883	STN1	95	44.142	Ovis_aries
ENSDARG00000007734	stn1	96	43.869	ENSPPAG00000030947	STN1	97	43.869	Pan_paniscus
ENSDARG00000007734	stn1	95	42.897	ENSPPRG00000010476	STN1	97	44.110	Panthera_pardus
ENSDARG00000007734	stn1	95	42.179	ENSPTIG00000017333	STN1	97	43.681	Panthera_tigris_altaica
ENSDARG00000007734	stn1	96	43.869	ENSPTRG00000002919	STN1	97	43.869	Pan_troglodytes
ENSDARG00000007734	stn1	96	44.687	ENSPANG00000020926	STN1	97	44.687	Papio_anubis
ENSDARG00000007734	stn1	96	54.144	ENSPKIG00000000721	stn1	96	54.144	Paramormyrops_kingsleyae
ENSDARG00000007734	stn1	97	43.989	ENSPSIG00000010802	STN1	97	43.989	Pelodiscus_sinensis
ENSDARG00000007734	stn1	96	41.576	ENSPEMG00000013944	Stn1	95	41.576	Peromyscus_maniculatus_bairdii
ENSDARG00000007734	stn1	97	42.318	ENSPCIG00000024497	STN1	98	42.318	Phascolarctos_cinereus
ENSDARG00000007734	stn1	96	44.262	ENSPPYG00000002628	STN1	97	44.262	Pongo_abelii
ENSDARG00000007734	stn1	97	45.308	ENSPCOG00000017648	STN1	98	45.308	Propithecus_coquereli
ENSDARG00000007734	stn1	97	44.173	ENSPVAG00000004187	STN1	98	44.173	Pteropus_vampyrus
ENSDARG00000007734	stn1	96	42.507	ENSRNOG00000020376	Stn1	95	42.507	Rattus_norvegicus
ENSDARG00000007734	stn1	96	44.959	ENSRBIG00000039819	STN1	97	44.959	Rhinopithecus_bieti
ENSDARG00000007734	stn1	96	44.959	ENSRROG00000013903	STN1	97	44.959	Rhinopithecus_roxellana
ENSDARG00000007734	stn1	96	43.869	ENSSBOG00000031516	STN1	97	44.687	Saimiri_boliviensis_boliviensis
ENSDARG00000007734	stn1	97	42.896	ENSSHAG00000017550	STN1	97	42.896	Sarcophilus_harrisii
ENSDARG00000007734	stn1	97	55.890	ENSSFOG00015004107	stn1	98	55.890	Scleropages_formosus
ENSDARG00000007734	stn1	96	44.142	ENSSSCG00000010605	STN1	82	44.142	Sus_scrofa
ENSDARG00000007734	stn1	97	43.902	ENSTGUG00000010354	STN1	98	43.902	Taeniopygia_guttata
ENSDARG00000007734	stn1	98	55.769	ENSTNIG00000014162	stn1	96	55.769	Tetraodon_nigroviridis
ENSDARG00000007734	stn1	63	54.645	ENSTBEG00000000659	STN1	61	54.645	Tupaia_belangeri
ENSDARG00000007734	stn1	96	44.054	ENSTTRG00000003375	STN1	97	44.054	Tursiops_truncatus
ENSDARG00000007734	stn1	97	43.175	ENSUMAG00000023647	STN1	97	43.175	Ursus_maritimus
ENSDARG00000007734	stn1	96	43.443	ENSVPAG00000002530	STN1	97	43.443	Vicugna_pacos
ENSDARG00000007734	stn1	97	43.817	ENSVVUG00000004636	-	58	43.817	Vulpes_vulpes
ENSDARG00000007734	stn1	95	39.496	ENSXETG00000011402	STN1	97	39.554	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000781	chromosome, telomeric region	-	IEA	Component
GO:0000784	nuclear chromosome, telomeric region	21873635.	IBA	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISS	Component
GO:0001944	vasculature development	27432940.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005694	chromosome	-	IEA	Component
GO:0010833	telomere maintenance via telomere lengthening	21873635.	IBA	Process
GO:0010833	telomere maintenance via telomere lengthening	-	ISS	Process
GO:0016233	telomere capping	21873635.	IBA	Process
GO:0016233	telomere capping	-	IEA	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	21873635.	IBA	Process
GO:0042162	telomeric DNA binding	21873635.	IBA	Function
GO:0043047	single-stranded telomeric DNA binding	21873635.	IBA	Function
GO:0043047	single-stranded telomeric DNA binding	-	IEA	Function
GO:0043047	single-stranded telomeric DNA binding	-	ISS	Function
GO:1990879	CST complex	21873635.	IBA	Component
GO:1990879	CST complex	-	IEA	Component