EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000007869 (Gene tree)
Gene ID: 562949
Gene Symbol: ehd3
Alias: si:ch211-147c1.2
Full Name: EH-domain containing 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 40216 bases
Position: chr20:38201644-38241859
Accession: ZDB-GENE-041014-352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000020154	MMR_HSR1	PF01926.23	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000022694	-	2680	-	ENSDARP00000020154	535 (aa)	-	Q5TYP7

Gene Model

Click here to download ENSDARG00000007869's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000007869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000007869	ehd3	69	32.987	ENSDARG00000104587	srl	79	32.976
ENSDARG00000007869	ehd3	99	85.902	ENSDARG00000014793	ehd1b	99	85.902
ENSDARG00000007869	ehd3	98	63.534	ENSDARG00000035137	ehd2a	97	63.534
ENSDARG00000007869	ehd3	99	74.019	ENSDARG00000054302	ehd4	87	74.019
ENSDARG00000007869	ehd3	97	71.780	ENSDARG00000040362	ehd2b	97	71.780
ENSDARG00000007869	ehd3	99	83.835	ENSDARG00000098853	ehd1a	99	83.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000007869	ehd3	100	92.710	ENSG00000013016	EHD3	100	92.710	Homo_sapiens
ENSDARG00000007869	ehd3	100	92.150	ENSAMEG00000004282	EHD3	100	92.150	Ailuropoda_melanoleuca
ENSDARG00000007869	ehd3	100	94.953	ENSACIG00000015462	ehd3	100	94.953	Amphilophus_citrinellus
ENSDARG00000007869	ehd3	100	81.121	ENSAOCG00000001953	-	100	82.243	Amphiprion_ocellaris
ENSDARG00000007869	ehd3	100	95.140	ENSAPEG00000018380	ehd3	100	95.140	Amphiprion_percula
ENSDARG00000007869	ehd3	100	94.766	ENSATEG00000002224	ehd3	100	94.766	Anabas_testudineus
ENSDARG00000007869	ehd3	100	92.710	ENSAPLG00000010467	EHD3	100	92.710	Anas_platyrhynchos
ENSDARG00000007869	ehd3	100	88.224	ENSACAG00000007103	EHD3	100	88.224	Anolis_carolinensis
ENSDARG00000007869	ehd3	100	92.336	ENSANAG00000020422	EHD3	100	92.336	Aotus_nancymaae
ENSDARG00000007869	ehd3	100	94.953	ENSACLG00000007581	ehd3	100	94.953	Astatotilapia_calliptera
ENSDARG00000007869	ehd3	100	91.863	ENSAMXG00000042972	ehd3	100	91.863	Astyanax_mexicanus
ENSDARG00000007869	ehd3	100	91.963	ENSBTAG00000001662	EHD3	100	91.963	Bos_taurus
ENSDARG00000007869	ehd3	100	92.523	ENSCJAG00000003137	EHD3	100	92.523	Callithrix_jacchus
ENSDARG00000007869	ehd3	100	92.710	ENSCAFG00000005348	EHD3	100	92.710	Canis_familiaris
ENSDARG00000007869	ehd3	99	90.038	ENSCAFG00020023684	EHD3	98	90.038	Canis_lupus_dingo
ENSDARG00000007869	ehd3	100	91.776	ENSCHIG00000017794	EHD3	100	91.776	Capra_hircus
ENSDARG00000007869	ehd3	100	92.523	ENSTSYG00000036583	EHD3	100	92.523	Carlito_syrichta
ENSDARG00000007869	ehd3	100	92.897	ENSCPOG00000034108	EHD3	100	92.897	Cavia_porcellus
ENSDARG00000007869	ehd3	100	92.523	ENSCCAG00000029860	EHD3	100	92.523	Cebus_capucinus
ENSDARG00000007869	ehd3	100	92.710	ENSCATG00000044604	EHD3	100	92.710	Cercocebus_atys
ENSDARG00000007869	ehd3	100	92.897	ENSCLAG00000010983	EHD3	100	92.897	Chinchilla_lanigera
ENSDARG00000007869	ehd3	100	92.710	ENSCSAG00000011254	EHD3	100	92.710	Chlorocebus_sabaeus
ENSDARG00000007869	ehd3	100	92.710	ENSCPBG00000011884	EHD3	100	92.710	Chrysemys_picta_bellii
ENSDARG00000007869	ehd3	100	92.897	ENSCANG00000024283	EHD3	100	92.897	Colobus_angolensis_palliatus
ENSDARG00000007869	ehd3	100	91.963	ENSCGRG00001020979	Ehd3	100	91.963	Cricetulus_griseus_chok1gshd
ENSDARG00000007869	ehd3	100	91.963	ENSCGRG00000013157	Ehd3	100	91.963	Cricetulus_griseus_crigri
ENSDARG00000007869	ehd3	100	93.832	ENSCSEG00000019195	ehd3	100	93.832	Cynoglossus_semilaevis
ENSDARG00000007869	ehd3	100	94.953	ENSCVAG00000016197	ehd3	100	94.953	Cyprinodon_variegatus
ENSDARG00000007869	ehd3	100	92.523	ENSDNOG00000039339	EHD3	100	92.523	Dasypus_novemcinctus
ENSDARG00000007869	ehd3	100	92.336	ENSDORG00000024162	Ehd3	100	92.336	Dipodomys_ordii
ENSDARG00000007869	ehd3	99	89.057	ENSETEG00000013323	EHD3	98	89.057	Echinops_telfairi
ENSDARG00000007869	ehd3	100	92.523	ENSEASG00005008635	EHD3	100	92.523	Equus_asinus_asinus
ENSDARG00000007869	ehd3	100	92.523	ENSECAG00000015195	EHD3	100	92.523	Equus_caballus
ENSDARG00000007869	ehd3	88	92.946	ENSEEUG00000010447	EHD3	86	92.946	Erinaceus_europaeus
ENSDARG00000007869	ehd3	99	96.816	ENSELUG00000023984	ehd3	99	96.816	Esox_lucius
ENSDARG00000007869	ehd3	100	93.084	ENSFCAG00000029627	EHD3	100	93.084	Felis_catus
ENSDARG00000007869	ehd3	100	92.336	ENSFALG00000011448	EHD3	100	92.336	Ficedula_albicollis
ENSDARG00000007869	ehd3	100	92.897	ENSFDAG00000017946	EHD3	100	92.897	Fukomys_damarensis
ENSDARG00000007869	ehd3	100	94.393	ENSFHEG00000018572	ehd3	100	94.393	Fundulus_heteroclitus
ENSDARG00000007869	ehd3	99	92.495	ENSGMOG00000006447	ehd3	99	92.495	Gadus_morhua
ENSDARG00000007869	ehd3	100	92.897	ENSGALG00000009086	EHD3	100	92.897	Gallus_gallus
ENSDARG00000007869	ehd3	100	94.019	ENSGAFG00000005665	ehd3	100	94.019	Gambusia_affinis
ENSDARG00000007869	ehd3	99	94.371	ENSGACG00000013160	ehd3	96	94.371	Gasterosteus_aculeatus
ENSDARG00000007869	ehd3	100	92.710	ENSGAGG00000024938	EHD3	100	92.710	Gopherus_agassizii
ENSDARG00000007869	ehd3	100	92.897	ENSGGOG00000003031	EHD3	100	92.897	Gorilla_gorilla
ENSDARG00000007869	ehd3	100	94.953	ENSHBUG00000023210	ehd3	100	94.953	Haplochromis_burtoni
ENSDARG00000007869	ehd3	100	92.710	ENSHGLG00000014803	EHD3	100	92.710	Heterocephalus_glaber_female
ENSDARG00000007869	ehd3	100	92.710	ENSHGLG00100011636	EHD3	100	92.710	Heterocephalus_glaber_male
ENSDARG00000007869	ehd3	100	93.645	ENSHCOG00000018418	ehd3	100	93.645	Hippocampus_comes
ENSDARG00000007869	ehd3	100	96.636	ENSIPUG00000004603	Ehd3	100	96.636	Ictalurus_punctatus
ENSDARG00000007869	ehd3	100	91.963	ENSSTOG00000028279	EHD3	100	91.963	Ictidomys_tridecemlineatus
ENSDARG00000007869	ehd3	100	92.336	ENSJJAG00000013415	Ehd3	100	92.336	Jaculus_jaculus
ENSDARG00000007869	ehd3	100	94.206	ENSKMAG00000018498	ehd3	100	94.206	Kryptolebias_marmoratus
ENSDARG00000007869	ehd3	100	94.579	ENSLBEG00000009464	ehd3	100	94.579	Labrus_bergylta
ENSDARG00000007869	ehd3	100	95.140	ENSLOCG00000016786	ehd3	100	95.140	Lepisosteus_oculatus
ENSDARG00000007869	ehd3	99	91.557	ENSLAFG00000016215	EHD3	96	91.557	Loxodonta_africana
ENSDARG00000007869	ehd3	100	92.336	ENSMFAG00000033132	EHD3	100	92.336	Macaca_fascicularis
ENSDARG00000007869	ehd3	100	92.336	ENSMMUG00000003476	EHD3	100	92.336	Macaca_mulatta
ENSDARG00000007869	ehd3	100	92.336	ENSMNEG00000041202	EHD3	100	92.336	Macaca_nemestrina
ENSDARG00000007869	ehd3	100	92.710	ENSMLEG00000023912	EHD3	100	92.710	Mandrillus_leucophaeus
ENSDARG00000007869	ehd3	100	94.579	ENSMAMG00000014744	ehd3	100	94.579	Mastacembelus_armatus
ENSDARG00000007869	ehd3	100	94.953	ENSMZEG00005012558	ehd3	100	94.953	Maylandia_zebra
ENSDARG00000007869	ehd3	100	92.523	ENSMAUG00000013239	Ehd3	100	92.523	Mesocricetus_auratus
ENSDARG00000007869	ehd3	100	90.841	ENSMICG00000043744	EHD3	100	90.841	Microcebus_murinus
ENSDARG00000007869	ehd3	100	92.150	ENSMOCG00000012572	Ehd3	100	92.150	Microtus_ochrogaster
ENSDARG00000007869	ehd3	100	80.187	ENSMMOG00000015157	ehd3	100	81.308	Mola_mola
ENSDARG00000007869	ehd3	100	92.897	ENSMODG00000015505	EHD3	100	92.897	Monodelphis_domestica
ENSDARG00000007869	ehd3	100	94.393	ENSMALG00000015586	ehd3	100	94.393	Monopterus_albus
ENSDARG00000007869	ehd3	100	92.523	MGP_CAROLIEiJ_G0021870	Ehd3	100	92.523	Mus_caroli
ENSDARG00000007869	ehd3	100	92.523	ENSMUSG00000024065	Ehd3	100	92.523	Mus_musculus
ENSDARG00000007869	ehd3	100	92.336	MGP_PahariEiJ_G0020857	Ehd3	100	92.336	Mus_pahari
ENSDARG00000007869	ehd3	100	92.336	MGP_SPRETEiJ_G0022782	Ehd3	100	92.336	Mus_spretus
ENSDARG00000007869	ehd3	89	92.437	ENSMPUG00000005148	EHD3	100	92.437	Mustela_putorius_furo
ENSDARG00000007869	ehd3	100	89.346	ENSMLUG00000008050	EHD3	100	89.346	Myotis_lucifugus
ENSDARG00000007869	ehd3	100	92.710	ENSNGAG00000014439	Ehd3	100	92.710	Nannospalax_galili
ENSDARG00000007869	ehd3	100	94.953	ENSNBRG00000022653	ehd3	100	94.953	Neolamprologus_brichardi
ENSDARG00000007869	ehd3	89	93.096	ENSNLEG00000015546	EHD3	100	93.096	Nomascus_leucogenys
ENSDARG00000007869	ehd3	100	91.215	ENSOPRG00000012242	EHD3	98	91.215	Ochotona_princeps
ENSDARG00000007869	ehd3	100	92.897	ENSODEG00000008117	EHD3	100	92.897	Octodon_degus
ENSDARG00000007869	ehd3	100	94.953	ENSONIG00000000693	ehd3	100	94.953	Oreochromis_niloticus
ENSDARG00000007869	ehd3	100	92.724	ENSOCUG00000001228	EHD3	100	92.724	Oryctolagus_cuniculus
ENSDARG00000007869	ehd3	100	93.832	ENSORLG00000017118	ehd3	100	93.832	Oryzias_latipes
ENSDARG00000007869	ehd3	100	93.832	ENSORLG00020002121	ehd3	100	93.832	Oryzias_latipes_hni
ENSDARG00000007869	ehd3	100	93.832	ENSORLG00015020550	ehd3	100	93.832	Oryzias_latipes_hsok
ENSDARG00000007869	ehd3	100	94.766	ENSOMEG00000000506	ehd3	100	94.766	Oryzias_melastigma
ENSDARG00000007869	ehd3	100	91.776	ENSOGAG00000000397	EHD3	100	91.776	Otolemur_garnettii
ENSDARG00000007869	ehd3	100	88.972	ENSOARG00000019698	EHD3	100	90.467	Ovis_aries
ENSDARG00000007869	ehd3	100	92.897	ENSPPAG00000035288	EHD3	100	92.897	Pan_paniscus
ENSDARG00000007869	ehd3	100	92.897	ENSPPRG00000002225	EHD3	100	92.897	Panthera_pardus
ENSDARG00000007869	ehd3	100	93.084	ENSPTIG00000013343	EHD3	100	93.084	Panthera_tigris_altaica
ENSDARG00000007869	ehd3	100	92.897	ENSPTRG00000011805	EHD3	100	92.897	Pan_troglodytes
ENSDARG00000007869	ehd3	100	92.710	ENSPANG00000023120	EHD3	100	92.710	Papio_anubis
ENSDARG00000007869	ehd3	100	96.449	ENSPKIG00000001422	ehd3	100	96.449	Paramormyrops_kingsleyae
ENSDARG00000007869	ehd3	100	92.523	ENSPSIG00000017757	EHD3	100	92.523	Pelodiscus_sinensis
ENSDARG00000007869	ehd3	100	93.458	ENSPMGG00000007882	ehd3	100	93.458	Periophthalmus_magnuspinnatus
ENSDARG00000007869	ehd3	100	92.897	ENSPCIG00000008811	EHD3	100	92.897	Phascolarctos_cinereus
ENSDARG00000007869	ehd3	100	94.393	ENSPFOG00000010935	ehd3	100	94.393	Poecilia_formosa
ENSDARG00000007869	ehd3	100	94.579	ENSPLAG00000001005	ehd3	100	94.579	Poecilia_latipinna
ENSDARG00000007869	ehd3	100	94.393	ENSPMEG00000006514	ehd3	100	94.393	Poecilia_mexicana
ENSDARG00000007869	ehd3	100	94.579	ENSPREG00000012884	ehd3	100	94.579	Poecilia_reticulata
ENSDARG00000007869	ehd3	100	93.084	ENSPPYG00000012514	EHD3	100	93.084	Pongo_abelii
ENSDARG00000007869	ehd3	89	91.004	ENSPCAG00000008166	EHD3	100	91.004	Procavia_capensis
ENSDARG00000007869	ehd3	100	91.402	ENSPCOG00000013548	EHD3	100	91.402	Propithecus_coquereli
ENSDARG00000007869	ehd3	98	92.720	ENSPVAG00000002680	EHD3	100	92.720	Pteropus_vampyrus
ENSDARG00000007869	ehd3	100	94.953	ENSPNYG00000003812	ehd3	100	94.953	Pundamilia_nyererei
ENSDARG00000007869	ehd3	100	98.505	ENSPNAG00000028984	ehd3	100	98.505	Pygocentrus_nattereri
ENSDARG00000007869	ehd3	100	92.897	ENSRNOG00000007744	Ehd3	100	92.897	Rattus_norvegicus
ENSDARG00000007869	ehd3	99	93.032	ENSRBIG00000033877	EHD3	100	87.636	Rhinopithecus_bieti
ENSDARG00000007869	ehd3	100	92.897	ENSRROG00000045782	EHD3	100	92.897	Rhinopithecus_roxellana
ENSDARG00000007869	ehd3	100	92.523	ENSSBOG00000030935	EHD3	100	92.523	Saimiri_boliviensis_boliviensis
ENSDARG00000007869	ehd3	100	92.523	ENSSHAG00000013011	EHD3	100	92.523	Sarcophilus_harrisii
ENSDARG00000007869	ehd3	100	96.262	ENSSFOG00015014110	ehd3	100	96.262	Scleropages_formosus
ENSDARG00000007869	ehd3	100	94.579	ENSSMAG00000008537	ehd3	100	94.579	Scophthalmus_maximus
ENSDARG00000007869	ehd3	100	94.766	ENSSDUG00000010820	ehd3	100	94.766	Seriola_dumerili
ENSDARG00000007869	ehd3	100	93.084	ENSSLDG00000025510	ehd3	100	93.084	Seriola_lalandi_dorsalis
ENSDARG00000007869	ehd3	99	93.246	ENSSPUG00000014730	EHD3	99	93.246	Sphenodon_punctatus
ENSDARG00000007869	ehd3	100	94.766	ENSSPAG00000013275	ehd3	100	94.766	Stegastes_partitus
ENSDARG00000007869	ehd3	100	92.150	ENSSSCG00000035987	EHD3	100	92.150	Sus_scrofa
ENSDARG00000007869	ehd3	100	90.672	ENSTGUG00000004572	EHD3	100	90.672	Taeniopygia_guttata
ENSDARG00000007869	ehd3	100	94.019	ENSTRUG00000014338	ehd3	100	94.019	Takifugu_rubripes
ENSDARG00000007869	ehd3	99	94.007	ENSTNIG00000010948	ehd3	99	94.007	Tetraodon_nigroviridis
ENSDARG00000007869	ehd3	99	90.960	ENSTBEG00000010371	EHD3	97	90.960	Tupaia_belangeri
ENSDARG00000007869	ehd3	100	88.411	ENSTTRG00000000167	EHD3	100	88.411	Tursiops_truncatus
ENSDARG00000007869	ehd3	100	92.710	ENSUAMG00000022243	EHD3	100	92.710	Ursus_americanus
ENSDARG00000007869	ehd3	99	91.760	ENSUMAG00000019931	EHD3	100	91.423	Ursus_maritimus
ENSDARG00000007869	ehd3	100	92.710	ENSVVUG00000007563	EHD3	98	92.710	Vulpes_vulpes
ENSDARG00000007869	ehd3	100	93.458	ENSXETG00000022070	ehd3	100	93.458	Xenopus_tropicalis
ENSDARG00000007869	ehd3	100	94.393	ENSXMAG00000025261	ehd3	100	94.393	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0030097	hemopoiesis	22139419.	IMP	Process
GO:0032456	endocytic recycling	-	IEA	Process
GO:0060271	cilium assembly	25686250.	IMP	Process