EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000008255 (Gene tree)
Gene ID: 324048
Gene Symbol: cnot6a
Alias: cnot6|wu:fa03c11|wu:fc17f01|zgc:65822
Full Name: CCR4-NOT transcription complex%2C subunit 6a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 24012 bases
Position: chr21:32757601-32781612
Accession: ZDB-GENE-030131-2768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000032583	Exo_endo_phos	PF03372.23	6.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000031028	-	4284	XM_009295585	ENSDARP00000032583	557 (aa)	XP_009293860	Q6PE30

Gene Model

Click here to download ENSDARG00000008255's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000008255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000008255	cnot6a	100	85.484	ENSDARG00000101072	cnot6b	100	85.484
ENSDARG00000008255	cnot6a	99	74.549	ENSDARG00000054597	cnot6l	98	74.549

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000008255	cnot6a	100	85.842	ENSG00000113300	CNOT6	100	92.105	Homo_sapiens
ENSDARG00000008255	cnot6a	100	90.519	ENSAPOG00000009994	cnot6b	100	90.519	Acanthochromis_polyacanthus
ENSDARG00000008255	cnot6a	100	86.071	ENSAMEG00000000949	CNOT6	99	85.000	Ailuropoda_melanoleuca
ENSDARG00000008255	cnot6a	100	90.502	ENSACIG00000016566	cnot6b	100	90.502	Amphilophus_citrinellus
ENSDARG00000008255	cnot6a	100	90.519	ENSAOCG00000006893	cnot6b	100	90.519	Amphiprion_ocellaris
ENSDARG00000008255	cnot6a	100	90.519	ENSAPEG00000016949	cnot6b	100	90.519	Amphiprion_percula
ENSDARG00000008255	cnot6a	100	89.624	ENSATEG00000007862	cnot6b	100	89.624	Anabas_testudineus
ENSDARG00000008255	cnot6a	100	87.276	ENSAPLG00000012715	CNOT6	99	87.276	Anas_platyrhynchos
ENSDARG00000008255	cnot6a	100	85.842	ENSACAG00000016548	CNOT6	100	85.842	Anolis_carolinensis
ENSDARG00000008255	cnot6a	100	85.842	ENSANAG00000030436	CNOT6	96	85.842	Aotus_nancymaae
ENSDARG00000008255	cnot6a	100	89.803	ENSACLG00000008279	cnot6b	100	89.982	Astatotilapia_calliptera
ENSDARG00000008255	cnot6a	100	87.993	ENSAMXG00000034694	cnot6b	100	87.993	Astyanax_mexicanus
ENSDARG00000008255	cnot6a	100	93.716	ENSAMXG00000019140	cnot6a	100	93.716	Astyanax_mexicanus
ENSDARG00000008255	cnot6a	100	86.738	ENSBTAG00000017362	CNOT6	100	86.738	Bos_taurus
ENSDARG00000008255	cnot6a	100	86.022	ENSCJAG00000009795	CNOT6	100	86.022	Callithrix_jacchus
ENSDARG00000008255	cnot6a	100	86.380	ENSCAFG00000000464	CNOT6	100	86.380	Canis_familiaris
ENSDARG00000008255	cnot6a	100	86.380	ENSCAFG00020002441	CNOT6	100	86.380	Canis_lupus_dingo
ENSDARG00000008255	cnot6a	100	86.380	ENSCHIG00000019100	CNOT6	100	86.380	Capra_hircus
ENSDARG00000008255	cnot6a	100	84.946	ENSTSYG00000003982	CNOT6	100	84.946	Carlito_syrichta
ENSDARG00000008255	cnot6a	100	81.362	ENSCPOG00000035657	CNOT6	100	81.362	Cavia_porcellus
ENSDARG00000008255	cnot6a	100	81.362	ENSCCAG00000033670	CNOT6	100	81.216	Cebus_capucinus
ENSDARG00000008255	cnot6a	100	85.842	ENSCATG00000042014	CNOT6	100	85.842	Cercocebus_atys
ENSDARG00000008255	cnot6a	100	84.946	ENSCLAG00000010489	CNOT6	100	84.946	Chinchilla_lanigera
ENSDARG00000008255	cnot6a	100	85.842	ENSCSAG00000008165	CNOT6	100	85.842	Chlorocebus_sabaeus
ENSDARG00000008255	cnot6a	100	85.842	ENSCHOG00000009680	CNOT6	100	85.842	Choloepus_hoffmanni
ENSDARG00000008255	cnot6a	100	87.276	ENSCPBG00000008908	CNOT6	100	87.276	Chrysemys_picta_bellii
ENSDARG00000008255	cnot6a	100	86.022	ENSCANG00000026756	CNOT6	100	86.022	Colobus_angolensis_palliatus
ENSDARG00000008255	cnot6a	100	84.740	ENSCGRG00001011452	Cnot6	100	84.740	Cricetulus_griseus_chok1gshd
ENSDARG00000008255	cnot6a	100	82.616	ENSCGRG00000010407	Cnot6	100	82.616	Cricetulus_griseus_crigri
ENSDARG00000008255	cnot6a	100	90.161	ENSCSEG00000010939	cnot6b	100	90.161	Cynoglossus_semilaevis
ENSDARG00000008255	cnot6a	100	88.372	ENSCVAG00000010538	cnot6b	100	88.372	Cyprinodon_variegatus
ENSDARG00000008255	cnot6a	100	86.918	ENSDNOG00000041644	CNOT6	100	86.918	Dasypus_novemcinctus
ENSDARG00000008255	cnot6a	100	77.957	ENSDORG00000001708	Cnot6	100	77.957	Dipodomys_ordii
ENSDARG00000008255	cnot6a	100	69.410	ENSETEG00000006975	CNOT6	100	69.410	Echinops_telfairi
ENSDARG00000008255	cnot6a	100	86.022	ENSEASG00005012794	-	100	86.022	Equus_asinus_asinus
ENSDARG00000008255	cnot6a	90	82.000	ENSEASG00005012957	-	99	81.200	Equus_asinus_asinus
ENSDARG00000008255	cnot6a	100	86.559	ENSECAG00000019325	CNOT6	100	86.559	Equus_caballus
ENSDARG00000008255	cnot6a	100	81.329	ENSECAG00000012704	-	99	81.329	Equus_caballus
ENSDARG00000008255	cnot6a	100	84.946	ENSEEUG00000015382	CNOT6	100	84.946	Erinaceus_europaeus
ENSDARG00000008255	cnot6a	100	87.654	ENSELUG00000015981	cnot6b	99	87.654	Esox_lucius
ENSDARG00000008255	cnot6a	100	88.151	ENSELUG00000024580	cnot6a	100	88.151	Esox_lucius
ENSDARG00000008255	cnot6a	100	86.380	ENSFCAG00000001881	CNOT6	100	86.380	Felis_catus
ENSDARG00000008255	cnot6a	100	87.455	ENSFALG00000007699	CNOT6	100	87.455	Ficedula_albicollis
ENSDARG00000008255	cnot6a	100	84.767	ENSFDAG00000001999	CNOT6	100	84.767	Fukomys_damarensis
ENSDARG00000008255	cnot6a	68	86.562	ENSFHEG00000013756	cnot6b	99	86.562	Fundulus_heteroclitus
ENSDARG00000008255	cnot6a	95	89.792	ENSGMOG00000009767	cnot6b	99	89.792	Gadus_morhua
ENSDARG00000008255	cnot6a	100	87.276	ENSGALG00000034316	CNOT6	100	87.276	Gallus_gallus
ENSDARG00000008255	cnot6a	100	88.730	ENSGAFG00000008525	cnot6b	100	88.730	Gambusia_affinis
ENSDARG00000008255	cnot6a	95	88.658	ENSGACG00000018046	cnot6b	99	88.658	Gasterosteus_aculeatus
ENSDARG00000008255	cnot6a	100	72.809	ENSGAGG00000012176	CNOT6	100	72.809	Gopherus_agassizii
ENSDARG00000008255	cnot6a	100	85.842	ENSGGOG00000003675	CNOT6	100	85.842	Gorilla_gorilla
ENSDARG00000008255	cnot6a	100	89.982	ENSHBUG00000002819	cnot6b	100	90.161	Haplochromis_burtoni
ENSDARG00000008255	cnot6a	100	84.767	ENSHGLG00000017756	CNOT6	100	84.767	Heterocephalus_glaber_female
ENSDARG00000008255	cnot6a	100	84.767	ENSHGLG00100005747	CNOT6	100	84.767	Heterocephalus_glaber_male
ENSDARG00000008255	cnot6a	100	88.889	ENSHCOG00000016176	cnot6b	100	89.068	Hippocampus_comes
ENSDARG00000008255	cnot6a	100	91.741	ENSIPUG00000019831	cnot6a	100	91.741	Ictalurus_punctatus
ENSDARG00000008255	cnot6a	100	87.634	ENSIPUG00000017482	cnot6b	100	87.634	Ictalurus_punctatus
ENSDARG00000008255	cnot6a	100	86.022	ENSSTOG00000002803	CNOT6	100	86.022	Ictidomys_tridecemlineatus
ENSDARG00000008255	cnot6a	100	85.305	ENSJJAG00000012296	Cnot6	100	85.305	Jaculus_jaculus
ENSDARG00000008255	cnot6a	100	88.014	ENSKMAG00000004640	cnot6b	100	88.014	Kryptolebias_marmoratus
ENSDARG00000008255	cnot6a	100	89.445	ENSLBEG00000027917	cnot6b	100	89.624	Labrus_bergylta
ENSDARG00000008255	cnot6a	100	91.577	ENSLOCG00000010102	cnot6b	99	91.577	Lepisosteus_oculatus
ENSDARG00000008255	cnot6a	100	87.097	ENSLAFG00000016742	CNOT6	100	87.097	Loxodonta_africana
ENSDARG00000008255	cnot6a	100	85.842	ENSMFAG00000030867	CNOT6	100	85.842	Macaca_fascicularis
ENSDARG00000008255	cnot6a	100	85.842	ENSMMUG00000018690	CNOT6	100	85.842	Macaca_mulatta
ENSDARG00000008255	cnot6a	100	85.842	ENSMNEG00000038565	CNOT6	100	85.842	Macaca_nemestrina
ENSDARG00000008255	cnot6a	100	85.842	ENSMLEG00000010555	CNOT6	100	85.842	Mandrillus_leucophaeus
ENSDARG00000008255	cnot6a	100	90.698	ENSMAMG00000007515	cnot6b	100	90.698	Mastacembelus_armatus
ENSDARG00000008255	cnot6a	100	89.803	ENSMZEG00005012899	cnot6b	100	89.982	Maylandia_zebra
ENSDARG00000008255	cnot6a	100	85.305	ENSMAUG00000019798	Cnot6	100	85.305	Mesocricetus_auratus
ENSDARG00000008255	cnot6a	98	77.982	ENSMICG00000028378	-	99	77.982	Microcebus_murinus
ENSDARG00000008255	cnot6a	100	84.588	ENSMICG00000013018	-	100	84.588	Microcebus_murinus
ENSDARG00000008255	cnot6a	100	85.305	ENSMOCG00000021662	Cnot6	100	85.305	Microtus_ochrogaster
ENSDARG00000008255	cnot6a	100	88.689	ENSMMOG00000003227	cnot6b	100	88.689	Mola_mola
ENSDARG00000008255	cnot6a	100	87.097	ENSMODG00000003979	CNOT6	100	87.097	Monodelphis_domestica
ENSDARG00000008255	cnot6a	100	91.055	ENSMALG00000014251	cnot6b	100	91.055	Monopterus_albus
ENSDARG00000008255	cnot6a	100	85.484	MGP_CAROLIEiJ_G0016277	Cnot6	100	85.484	Mus_caroli
ENSDARG00000008255	cnot6a	100	85.484	ENSMUSG00000020362	Cnot6	100	85.484	Mus_musculus
ENSDARG00000008255	cnot6a	100	85.484	MGP_PahariEiJ_G0017413	Cnot6	100	85.484	Mus_pahari
ENSDARG00000008255	cnot6a	100	85.484	MGP_SPRETEiJ_G0017122	Cnot6	100	85.484	Mus_spretus
ENSDARG00000008255	cnot6a	100	86.738	ENSMPUG00000000587	CNOT6	96	86.738	Mustela_putorius_furo
ENSDARG00000008255	cnot6a	100	84.725	ENSMLUG00000010257	CNOT6	100	83.659	Myotis_lucifugus
ENSDARG00000008255	cnot6a	100	84.588	ENSNGAG00000008269	Cnot6	100	84.588	Nannospalax_galili
ENSDARG00000008255	cnot6a	100	89.982	ENSNBRG00000010798	cnot6b	100	90.161	Neolamprologus_brichardi
ENSDARG00000008255	cnot6a	100	85.099	ENSNLEG00000002322	CNOT6	100	85.099	Nomascus_leucogenys
ENSDARG00000008255	cnot6a	81	85.581	ENSMEUG00000000025	CNOT6	81	85.581	Notamacropus_eugenii
ENSDARG00000008255	cnot6a	88	85.952	ENSOPRG00000008244	-	88	85.952	Ochotona_princeps
ENSDARG00000008255	cnot6a	100	84.409	ENSODEG00000007041	CNOT6	100	84.409	Octodon_degus
ENSDARG00000008255	cnot6a	75	90.544	ENSONIG00000013027	cnot6b	99	90.544	Oreochromis_niloticus
ENSDARG00000008255	cnot6a	100	85.484	ENSOANG00000010226	CNOT6	100	85.484	Ornithorhynchus_anatinus
ENSDARG00000008255	cnot6a	100	85.179	ENSOCUG00000011083	CNOT6	100	84.107	Oryctolagus_cuniculus
ENSDARG00000008255	cnot6a	100	89.445	ENSORLG00000005059	cnot6b	100	89.445	Oryzias_latipes
ENSDARG00000008255	cnot6a	100	89.445	ENSORLG00020012784	cnot6b	100	89.445	Oryzias_latipes_hni
ENSDARG00000008255	cnot6a	94	88.910	ENSORLG00015022658	cnot6b	98	88.910	Oryzias_latipes_hsok
ENSDARG00000008255	cnot6a	100	89.982	ENSOMEG00000005295	cnot6b	100	89.982	Oryzias_melastigma
ENSDARG00000008255	cnot6a	94	85.333	ENSOGAG00000032470	CNOT6	100	84.190	Otolemur_garnettii
ENSDARG00000008255	cnot6a	97	85.820	ENSOARG00000001003	CNOT6	100	84.715	Ovis_aries
ENSDARG00000008255	cnot6a	100	85.842	ENSPPAG00000032253	CNOT6	100	85.842	Pan_paniscus
ENSDARG00000008255	cnot6a	100	86.201	ENSPPRG00000011912	CNOT6	100	86.201	Panthera_pardus
ENSDARG00000008255	cnot6a	100	86.201	ENSPTIG00000016794	CNOT6	100	86.201	Panthera_tigris_altaica
ENSDARG00000008255	cnot6a	100	85.842	ENSPTRG00000017636	CNOT6	100	85.842	Pan_troglodytes
ENSDARG00000008255	cnot6a	100	85.842	ENSPANG00000016191	CNOT6	100	85.842	Papio_anubis
ENSDARG00000008255	cnot6a	100	91.756	ENSPKIG00000021368	cnot6b	100	91.756	Paramormyrops_kingsleyae
ENSDARG00000008255	cnot6a	98	87.339	ENSPSIG00000017307	CNOT6	100	87.339	Pelodiscus_sinensis
ENSDARG00000008255	cnot6a	100	89.964	ENSPMGG00000011238	cnot6b	100	89.964	Periophthalmus_magnuspinnatus
ENSDARG00000008255	cnot6a	100	84.409	ENSPEMG00000000627	Cnot6	100	84.409	Peromyscus_maniculatus_bairdii
ENSDARG00000008255	cnot6a	100	87.097	ENSPCIG00000020319	CNOT6	99	87.097	Phascolarctos_cinereus
ENSDARG00000008255	cnot6a	100	88.730	ENSPFOG00000006291	cnot6b	100	88.730	Poecilia_formosa
ENSDARG00000008255	cnot6a	100	85.305	ENSPLAG00000008266	cnot6b	100	85.305	Poecilia_latipinna
ENSDARG00000008255	cnot6a	100	88.909	ENSPMEG00000009091	cnot6b	100	88.909	Poecilia_mexicana
ENSDARG00000008255	cnot6a	100	88.351	ENSPREG00000003713	cnot6b	100	88.351	Poecilia_reticulata
ENSDARG00000008255	cnot6a	100	85.842	ENSPPYG00000016137	CNOT6	100	85.842	Pongo_abelii
ENSDARG00000008255	cnot6a	59	94.444	ENSPCAG00000005599	-	54	94.444	Procavia_capensis
ENSDARG00000008255	cnot6a	100	80.466	ENSPCOG00000017359	CNOT6	100	81.183	Propithecus_coquereli
ENSDARG00000008255	cnot6a	100	82.079	ENSPVAG00000003069	CNOT6	100	82.079	Pteropus_vampyrus
ENSDARG00000008255	cnot6a	100	89.982	ENSPNYG00000000321	cnot6b	100	90.161	Pundamilia_nyererei
ENSDARG00000008255	cnot6a	100	93.537	ENSPNAG00000029586	cnot6a	100	93.537	Pygocentrus_nattereri
ENSDARG00000008255	cnot6a	100	89.427	ENSPNAG00000028816	cnot6b	100	89.427	Pygocentrus_nattereri
ENSDARG00000008255	cnot6a	100	84.767	ENSRNOG00000054891	Cnot6	100	84.767	Rattus_norvegicus
ENSDARG00000008255	cnot6a	100	85.663	ENSRBIG00000004309	CNOT6	100	85.663	Rhinopithecus_bieti
ENSDARG00000008255	cnot6a	100	85.663	ENSRROG00000035378	CNOT6	100	85.663	Rhinopithecus_roxellana
ENSDARG00000008255	cnot6a	100	85.842	ENSSBOG00000030494	CNOT6	100	85.842	Saimiri_boliviensis_boliviensis
ENSDARG00000008255	cnot6a	100	87.097	ENSSHAG00000017436	CNOT6	100	87.097	Sarcophilus_harrisii
ENSDARG00000008255	cnot6a	100	91.577	ENSSFOG00015015133	CNOT6	100	91.577	Scleropages_formosus
ENSDARG00000008255	cnot6a	100	91.398	ENSSFOG00015022383	cnot6a	96	91.398	Scleropages_formosus
ENSDARG00000008255	cnot6a	100	89.267	ENSSMAG00000003084	cnot6b	100	89.267	Scophthalmus_maximus
ENSDARG00000008255	cnot6a	100	90.519	ENSSDUG00000004151	cnot6b	100	90.519	Seriola_dumerili
ENSDARG00000008255	cnot6a	100	90.340	ENSSLDG00000004448	cnot6b	100	90.519	Seriola_lalandi_dorsalis
ENSDARG00000008255	cnot6a	64	68.802	ENSSARG00000012650	-	100	68.802	Sorex_araneus
ENSDARG00000008255	cnot6a	100	86.918	ENSSPUG00000007893	CNOT6	100	86.918	Sphenodon_punctatus
ENSDARG00000008255	cnot6a	100	90.698	ENSSPAG00000000149	cnot6b	100	90.698	Stegastes_partitus
ENSDARG00000008255	cnot6a	100	86.559	ENSSSCG00000014009	CNOT6	100	86.559	Sus_scrofa
ENSDARG00000008255	cnot6a	100	87.097	ENSTGUG00000001119	CNOT6	100	87.097	Taeniopygia_guttata
ENSDARG00000008255	cnot6a	100	86.559	ENSTRUG00000002818	cnot6b	100	86.559	Takifugu_rubripes
ENSDARG00000008255	cnot6a	100	87.634	ENSTNIG00000004443	cnot6b	99	87.634	Tetraodon_nigroviridis
ENSDARG00000008255	cnot6a	66	85.156	ENSTBEG00000017094	-	75	85.156	Tupaia_belangeri
ENSDARG00000008255	cnot6a	100	86.380	ENSTTRG00000009363	CNOT6	100	86.380	Tursiops_truncatus
ENSDARG00000008255	cnot6a	90	75.992	ENSUAMG00000004579	CNOT6	88	85.349	Ursus_americanus
ENSDARG00000008255	cnot6a	100	82.051	ENSUMAG00000024577	CNOT6	100	82.051	Ursus_maritimus
ENSDARG00000008255	cnot6a	83	91.667	ENSVPAG00000003593	CNOT6	83	91.667	Vicugna_pacos
ENSDARG00000008255	cnot6a	100	86.380	ENSVVUG00000026940	CNOT6	100	86.380	Vulpes_vulpes
ENSDARG00000008255	cnot6a	100	85.663	ENSXCOG00000003360	cnot6b	100	85.663	Xiphophorus_couchianus
ENSDARG00000008255	cnot6a	100	88.909	ENSXMAG00000008730	cnot6b	100	88.909	Xiphophorus_maculatus