EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000008395 (Gene tree)
Gene ID: 324743
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 15473 bases
Position: chr25:6432578-6448050
Accession: ZDB-GENE-030131-3464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000016305	Snurportin1	PF11538.8	9.3e-17	1	1
ENSDARP00000156718	Snurportin1	PF11538.8	9.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000139606	-	783	-	-	- (aa)	-	-
ENSDART00000012820	-	1525	XM_021470452	ENSDARP00000016305	365 (aa)	XP_021326127	Q6P5J9
ENSDART00000180616	-	5063	-	ENSDARP00000156718	365 (aa)	-	Q6P5J9

Gene Model

Click here to download ENSDARG00000008395's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000008395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000008395	snupn	98	63.085	ENSG00000169371	SNUPN	100	76.190	Homo_sapiens
ENSDARG00000008395	snupn	100	73.797	ENSAPOG00000016953	snupn	100	72.995	Acanthochromis_polyacanthus
ENSDARG00000008395	snupn	96	63.559	ENSAMEG00000008291	SNUPN	95	64.124	Ailuropoda_melanoleuca
ENSDARG00000008395	snupn	99	72.922	ENSACIG00000012409	snupn	99	72.118	Amphilophus_citrinellus
ENSDARG00000008395	snupn	100	73.797	ENSAOCG00000018096	snupn	100	72.995	Amphiprion_ocellaris
ENSDARG00000008395	snupn	100	73.797	ENSAPEG00000008834	snupn	100	72.995	Amphiprion_percula
ENSDARG00000008395	snupn	99	75.067	ENSATEG00000021019	snupn	99	74.064	Anabas_testudineus
ENSDARG00000008395	snupn	98	63.158	ENSANAG00000025568	SNUPN	98	63.435	Aotus_nancymaae
ENSDARG00000008395	snupn	99	73.554	ENSACLG00000025155	snupn	96	73.464	Astatotilapia_calliptera
ENSDARG00000008395	snupn	100	81.644	ENSAMXG00000038311	snupn	100	81.644	Astyanax_mexicanus
ENSDARG00000008395	snupn	99	63.144	ENSBTAG00000021293	SNUPN	99	63.144	Bos_taurus
ENSDARG00000008395	snupn	83	41.883	WBGene00017746	F23F1.5	88	41.158	Caenorhabditis_elegans
ENSDARG00000008395	snupn	98	63.435	ENSCJAG00000003005	SNUPN	98	63.435	Callithrix_jacchus
ENSDARG00000008395	snupn	98	61.496	ENSCAFG00000018035	SNUPN	98	62.050	Canis_familiaris
ENSDARG00000008395	snupn	99	62.331	ENSCHIG00000018047	SNUPN	99	62.331	Capra_hircus
ENSDARG00000008395	snupn	95	63.277	ENSTSYG00000037224	SNUPN	99	62.228	Carlito_syrichta
ENSDARG00000008395	snupn	95	57.790	ENSCAPG00000005061	SNUPN	96	57.022	Cavia_aperea
ENSDARG00000008395	snupn	95	65.439	ENSCPOG00000034772	SNUPN	96	64.607	Cavia_porcellus
ENSDARG00000008395	snupn	98	62.881	ENSCCAG00000016169	-	98	63.158	Cebus_capucinus
ENSDARG00000008395	snupn	98	62.670	ENSCATG00000039783	SNUPN	99	62.943	Cercocebus_atys
ENSDARG00000008395	snupn	95	64.489	ENSCLAG00000016968	SNUPN	100	62.803	Chinchilla_lanigera
ENSDARG00000008395	snupn	98	61.853	ENSCSAG00000019246	-	99	62.125	Chlorocebus_sabaeus
ENSDARG00000008395	snupn	98	62.670	ENSCSAG00000014576	-	88	62.943	Chlorocebus_sabaeus
ENSDARG00000008395	snupn	96	50.423	ENSCHOG00000005403	SNUPN	95	50.986	Choloepus_hoffmanni
ENSDARG00000008395	snupn	100	64.894	ENSCPBG00000022172	SNUPN	95	64.362	Chrysemys_picta_bellii
ENSDARG00000008395	snupn	98	62.943	ENSCANG00000029707	SNUPN	99	63.215	Colobus_angolensis_palliatus
ENSDARG00000008395	snupn	96	64.407	ENSCGRG00001004622	Snupn	96	64.689	Cricetulus_griseus_chok1gshd
ENSDARG00000008395	snupn	96	64.407	ENSCGRG00000002515	Snupn	96	64.689	Cricetulus_griseus_crigri
ENSDARG00000008395	snupn	100	70.321	ENSCSEG00000003160	snupn	89	70.321	Cynoglossus_semilaevis
ENSDARG00000008395	snupn	99	73.046	ENSCVAG00000010502	snupn	99	72.995	Cyprinodon_variegatus
ENSDARG00000008395	snupn	98	60.882	ENSDNOG00000044304	SNUPN	93	61.433	Dasypus_novemcinctus
ENSDARG00000008395	snupn	98	62.943	ENSDORG00000009051	Snupn	99	63.215	Dipodomys_ordii
ENSDARG00000008395	snupn	98	53.951	ENSETEG00000013792	SNUPN	99	51.771	Echinops_telfairi
ENSDARG00000008395	snupn	97	53.476	ENSEBUG00000006682	snupn	95	53.351	Eptatretus_burgeri
ENSDARG00000008395	snupn	98	62.259	ENSEASG00005015697	SNUPN	95	62.534	Equus_asinus_asinus
ENSDARG00000008395	snupn	98	62.125	ENSECAG00000017726	SNUPN	99	62.398	Equus_caballus
ENSDARG00000008395	snupn	68	64.246	ENSEEUG00000000981	-	68	64.804	Erinaceus_europaeus
ENSDARG00000008395	snupn	96	72.727	ENSELUG00000023305	snupn	94	71.901	Esox_lucius
ENSDARG00000008395	snupn	96	62.712	ENSFCAG00000040981	SNUPN	95	63.277	Felis_catus
ENSDARG00000008395	snupn	95	66.289	ENSFDAG00000011599	SNUPN	96	65.634	Fukomys_damarensis
ENSDARG00000008395	snupn	99	74.531	ENSFHEG00000017627	snupn	99	73.727	Fundulus_heteroclitus
ENSDARG00000008395	snupn	95	73.639	ENSGMOG00000009272	snupn	100	74.286	Gadus_morhua
ENSDARG00000008395	snupn	94	60.114	ENSGALG00000029537	SNUPN	98	59.892	Gallus_gallus
ENSDARG00000008395	snupn	99	75.000	ENSGAFG00000004954	snupn	99	75.000	Gambusia_affinis
ENSDARG00000008395	snupn	95	77.937	ENSGACG00000007450	snupn	100	76.218	Gasterosteus_aculeatus
ENSDARG00000008395	snupn	100	64.706	ENSGAGG00000022470	SNUPN	100	64.096	Gopherus_agassizii
ENSDARG00000008395	snupn	55	65.079	ENSGGOG00000004581	-	92	65.079	Gorilla_gorilla
ENSDARG00000008395	snupn	97	74.510	ENSHBUG00000006950	snupn	96	74.022	Haplochromis_burtoni
ENSDARG00000008395	snupn	100	63.514	ENSHGLG00000000536	SNUPN	100	63.514	Heterocephalus_glaber_female
ENSDARG00000008395	snupn	100	63.514	ENSHGLG00100016161	SNUPN	100	63.514	Heterocephalus_glaber_male
ENSDARG00000008395	snupn	99	72.922	ENSHCOG00000007262	snupn	99	73.190	Hippocampus_comes
ENSDARG00000008395	snupn	100	81.370	ENSIPUG00000014460	Snupn	100	81.370	Ictalurus_punctatus
ENSDARG00000008395	snupn	96	62.994	ENSSTOG00000005904	SNUPN	95	63.277	Ictidomys_tridecemlineatus
ENSDARG00000008395	snupn	100	70.081	ENSKMAG00000009957	snupn	100	70.081	Kryptolebias_marmoratus
ENSDARG00000008395	snupn	99	73.740	ENSLBEG00000020694	snupn	99	74.074	Labrus_bergylta
ENSDARG00000008395	snupn	99	63.488	ENSLACG00000015801	SNUPN	99	63.710	Latimeria_chalumnae
ENSDARG00000008395	snupn	96	75.499	ENSLOCG00000015064	snupn	95	75.499	Lepisosteus_oculatus
ENSDARG00000008395	snupn	98	60.763	ENSLAFG00000004422	SNUPN	99	61.580	Loxodonta_africana
ENSDARG00000008395	snupn	79	61.497	ENSMFAG00000003706	SNUPN	98	61.497	Macaca_fascicularis
ENSDARG00000008395	snupn	98	62.943	ENSMMUG00000004784	SNUPN	99	63.215	Macaca_mulatta
ENSDARG00000008395	snupn	98	58.856	ENSMLEG00000041966	SNUPN	98	58.856	Mandrillus_leucophaeus
ENSDARG00000008395	snupn	99	75.871	ENSMAMG00000023109	snupn	99	75.871	Mastacembelus_armatus
ENSDARG00000008395	snupn	99	73.829	ENSMZEG00005010806	snupn	96	73.743	Maylandia_zebra
ENSDARG00000008395	snupn	98	63.085	ENSMAUG00000020426	Snupn	99	63.912	Mesocricetus_auratus
ENSDARG00000008395	snupn	96	63.662	ENSMICG00000016438	SNUPN	95	64.225	Microcebus_murinus
ENSDARG00000008395	snupn	96	64.689	ENSMOCG00000014238	Snupn	96	64.689	Microtus_ochrogaster
ENSDARG00000008395	snupn	99	73.656	ENSMMOG00000001321	snupn	99	75.067	Mola_mola
ENSDARG00000008395	snupn	95	64.067	ENSMODG00000008852	SNUPN	95	63.510	Monodelphis_domestica
ENSDARG00000008395	snupn	97	76.124	ENSMALG00000015058	snupn	96	76.124	Monopterus_albus
ENSDARG00000008395	snupn	96	64.407	MGP_CAROLIEiJ_G0032259	Snupn	96	65.254	Mus_caroli
ENSDARG00000008395	snupn	96	64.407	ENSMUSG00000055334	Snupn	96	65.254	Mus_musculus
ENSDARG00000008395	snupn	96	64.407	MGP_PahariEiJ_G0015126	Snupn	96	65.254	Mus_pahari
ENSDARG00000008395	snupn	96	64.407	MGP_SPRETEiJ_G0033399	Snupn	96	65.254	Mus_spretus
ENSDARG00000008395	snupn	98	61.749	ENSMPUG00000017324	SNUPN	99	62.295	Mustela_putorius_furo
ENSDARG00000008395	snupn	96	53.221	ENSMLUG00000000038	-	100	53.221	Myotis_lucifugus
ENSDARG00000008395	snupn	96	62.360	ENSMLUG00000027517	-	95	62.360	Myotis_lucifugus
ENSDARG00000008395	snupn	96	58.989	ENSMLUG00000027485	-	95	58.989	Myotis_lucifugus
ENSDARG00000008395	snupn	98	61.878	ENSNGAG00000018735	Snupn	97	62.983	Nannospalax_galili
ENSDARG00000008395	snupn	99	73.554	ENSNBRG00000017919	snupn	97	73.077	Neolamprologus_brichardi
ENSDARG00000008395	snupn	66	75.000	ENSNLEG00000035240	-	81	75.000	Nomascus_leucogenys
ENSDARG00000008395	snupn	95	55.085	ENSOPRG00000015889	-	95	55.085	Ochotona_princeps
ENSDARG00000008395	snupn	89	53.776	ENSODEG00000014491	SNUPN	100	52.571	Octodon_degus
ENSDARG00000008395	snupn	97	75.350	ENSONIG00000012855	snupn	98	74.860	Oreochromis_niloticus
ENSDARG00000008395	snupn	97	62.707	ENSOCUG00000008801	SNUPN	97	62.983	Oryctolagus_cuniculus
ENSDARG00000008395	snupn	97	75.070	ENSORLG00000001836	snupn	96	75.698	Oryzias_latipes
ENSDARG00000008395	snupn	97	75.419	ENSORLG00020021175	snupn	96	75.419	Oryzias_latipes_hni
ENSDARG00000008395	snupn	97	75.978	ENSORLG00015014444	snupn	95	75.978	Oryzias_latipes_hsok
ENSDARG00000008395	snupn	96	76.705	ENSOMEG00000004853	snupn	96	75.698	Oryzias_melastigma
ENSDARG00000008395	snupn	96	61.236	ENSOGAG00000004915	SNUPN	96	61.517	Otolemur_garnettii
ENSDARG00000008395	snupn	99	62.602	ENSOARG00000001991	SNUPN	96	62.602	Ovis_aries
ENSDARG00000008395	snupn	98	63.085	ENSPPAG00000034351	SNUPN	98	63.636	Pan_paniscus
ENSDARG00000008395	snupn	96	62.712	ENSPPRG00000023192	SNUPN	95	63.277	Panthera_pardus
ENSDARG00000008395	snupn	96	62.712	ENSPTIG00000003528	SNUPN	95	63.277	Panthera_tigris_altaica
ENSDARG00000008395	snupn	98	63.361	ENSPTRG00000007302	SNUPN	98	63.912	Pan_troglodytes
ENSDARG00000008395	snupn	98	55.041	ENSPANG00000034514	SNUPN	98	55.313	Papio_anubis
ENSDARG00000008395	snupn	98	72.626	ENSPKIG00000012444	snupn	98	73.333	Paramormyrops_kingsleyae
ENSDARG00000008395	snupn	95	65.546	ENSPSIG00000015229	SNUPN	95	65.181	Pelodiscus_sinensis
ENSDARG00000008395	snupn	99	72.087	ENSPMGG00000023843	snupn	97	72.432	Periophthalmus_magnuspinnatus
ENSDARG00000008395	snupn	96	65.819	ENSPCIG00000007854	SNUPN	95	64.972	Phascolarctos_cinereus
ENSDARG00000008395	snupn	99	73.784	ENSPFOG00000014221	snupn	98	73.854	Poecilia_formosa
ENSDARG00000008395	snupn	99	73.784	ENSPLAG00000002339	snupn	98	73.854	Poecilia_latipinna
ENSDARG00000008395	snupn	99	73.243	ENSPMEG00000012436	snupn	98	73.315	Poecilia_mexicana
ENSDARG00000008395	snupn	99	73.243	ENSPREG00000012683	snupn	98	73.867	Poecilia_reticulata
ENSDARG00000008395	snupn	98	55.923	ENSPPYG00000006663	SNUPN	97	56.474	Pongo_abelii
ENSDARG00000008395	snupn	96	62.994	ENSPCOG00000025482	SNUPN	95	62.994	Propithecus_coquereli
ENSDARG00000008395	snupn	95	62.323	ENSPVAG00000010035	SNUPN	99	61.035	Pteropus_vampyrus
ENSDARG00000008395	snupn	97	74.510	ENSPNYG00000008752	snupn	96	74.022	Pundamilia_nyererei
ENSDARG00000008395	snupn	100	82.192	ENSPNAG00000026875	snupn	100	82.192	Pygocentrus_nattereri
ENSDARG00000008395	snupn	96	64.407	ENSRNOG00000005426	Snupn	96	64.972	Rattus_norvegicus
ENSDARG00000008395	snupn	98	62.943	ENSRBIG00000038665	SNUPN	99	63.215	Rhinopithecus_bieti
ENSDARG00000008395	snupn	98	62.943	ENSRROG00000043625	SNUPN	99	63.215	Rhinopithecus_roxellana
ENSDARG00000008395	snupn	99	62.740	ENSSBOG00000029086	-	99	63.014	Saimiri_boliviensis_boliviensis
ENSDARG00000008395	snupn	91	77.039	ENSSFOG00015022264	snupn	66	77.039	Scleropages_formosus
ENSDARG00000008395	snupn	99	76.408	ENSSMAG00000005485	snupn	99	76.408	Scophthalmus_maximus
ENSDARG00000008395	snupn	99	76.139	ENSSDUG00000023461	snupn	99	75.067	Seriola_dumerili
ENSDARG00000008395	snupn	99	76.344	ENSSLDG00000001425	snupn	99	75.538	Seriola_lalandi_dorsalis
ENSDARG00000008395	snupn	96	52.661	ENSSARG00000005585	SNUPN	95	52.941	Sorex_araneus
ENSDARG00000008395	snupn	99	63.636	ENSSPUG00000014331	SNUPN	99	63.904	Sphenodon_punctatus
ENSDARG00000008395	snupn	100	74.332	ENSSPAG00000001216	snupn	100	73.529	Stegastes_partitus
ENSDARG00000008395	snupn	98	63.288	ENSSSCG00000001877	SNUPN	98	63.288	Sus_scrofa
ENSDARG00000008395	snupn	95	77.778	ENSTRUG00000016085	snupn	92	77.208	Takifugu_rubripes
ENSDARG00000008395	snupn	95	65.625	ENSTNIG00000008456	snupn	100	66.193	Tetraodon_nigroviridis
ENSDARG00000008395	snupn	98	62.810	ENSTBEG00000002434	SNUPN	98	61.983	Tupaia_belangeri
ENSDARG00000008395	snupn	98	57.493	ENSTTRG00000011484	SNUPN	99	57.493	Tursiops_truncatus
ENSDARG00000008395	snupn	96	63.559	ENSUAMG00000022723	SNUPN	95	64.124	Ursus_americanus
ENSDARG00000008395	snupn	96	63.842	ENSUMAG00000003738	SNUPN	95	64.407	Ursus_maritimus
ENSDARG00000008395	snupn	96	62.108	ENSVVUG00000019574	SNUPN	95	62.393	Vulpes_vulpes
ENSDARG00000008395	snupn	96	68.839	ENSXETG00000015280	snupn	99	68.927	Xenopus_tropicalis
ENSDARG00000008395	snupn	99	73.514	ENSXMAG00000006634	snupn	99	73.585	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006606	protein import into nucleus	-	IEA	Process
GO:0061015	snRNA import into nucleus	-	IEA	Process
GO:0061608	nuclear import signal receptor activity	-	IEA	Function