EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000008560 (Gene tree)
Gene ID: 436739
Gene Symbol: brap
Alias: zgc:92894
Full Name: BRCA1 associated protein
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22418 bases
Position: chr10:3336772-3359189
Accession: ZDB-GENE-040718-168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000103873	RRM_1	PF00076.22	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000109148	-	1984	XM_021479154	ENSDARP00000103873	578 (aa)	XP_021334829	F1Q6D7

Gene Model

Click here to download ENSDARG00000008560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000008560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000008560	brap	80	86.667	ENSACIG00000018590	brap	99	85.000	Amphilophus_citrinellus
ENSDARG00000008560	brap	93	74.088	ENSAOCG00000018827	brap	100	72.906	Amphiprion_ocellaris
ENSDARG00000008560	brap	97	81.282	ENSACLG00000024094	brap	100	80.068	Astatotilapia_calliptera
ENSDARG00000008560	brap	97	81.129	ENSAMXG00000041761	brap	99	80.103	Astyanax_mexicanus
ENSDARG00000008560	brap	97	74.271	ENSCSEG00000012400	brap	100	73.957	Cynoglossus_semilaevis
ENSDARG00000008560	brap	97	79.443	ENSCVAG00000006044	brap	100	78.098	Cyprinodon_variegatus
ENSDARG00000008560	brap	97	78.746	ENSFHEG00000020426	brap	100	77.665	Fundulus_heteroclitus
ENSDARG00000008560	brap	94	80.000	ENSGMOG00000012362	brap	99	80.000	Gadus_morhua
ENSDARG00000008560	brap	97	79.130	ENSGAFG00000005563	brap	100	78.136	Gambusia_affinis
ENSDARG00000008560	brap	97	81.034	ENSHBUG00000010347	brap	100	79.832	Haplochromis_burtoni
ENSDARG00000008560	brap	95	80.325	ENSHCOG00000004954	brap	100	77.419	Hippocampus_comes
ENSDARG00000008560	brap	97	81.174	ENSMZEG00005008433	brap	100	79.966	Maylandia_zebra
ENSDARG00000008560	brap	96	81.917	ENSMALG00000020336	brap	100	79.447	Monopterus_albus
ENSDARG00000008560	brap	80	86.882	ENSNBRG00000018425	brap	99	85.208	Neolamprologus_brichardi
ENSDARG00000008560	brap	97	68.935	ENSORLG00000000523	brap	100	67.797	Oryzias_latipes
ENSDARG00000008560	brap	92	77.095	ENSPMGG00000017256	brap	100	76.182	Periophthalmus_magnuspinnatus
ENSDARG00000008560	brap	97	80.000	ENSPLAG00000021393	brap	100	78.814	Poecilia_latipinna
ENSDARG00000008560	brap	97	80.174	ENSPMEG00000016233	brap	100	78.983	Poecilia_mexicana
ENSDARG00000008560	brap	97	80.174	ENSPREG00000016387	brap	100	78.983	Poecilia_reticulata
ENSDARG00000008560	brap	97	80.862	ENSPNYG00000003247	brap	100	79.664	Pundamilia_nyererei
ENSDARG00000008560	brap	100	85.884	ENSPNAG00000002344	brap	100	85.884	Pygocentrus_nattereri
ENSDARG00000008560	brap	92	79.855	ENSSLDG00000010908	brap	100	78.622	Seriola_lalandi_dorsalis
ENSDARG00000008560	brap	95	77.281	ENSSPUG00000010293	BRAP	100	77.639	Sphenodon_punctatus
ENSDARG00000008560	brap	97	80.069	ENSSPAG00000015585	brap	100	78.885	Stegastes_partitus
ENSDARG00000008560	brap	97	77.975	ENSXCOG00000010198	brap	100	76.817	Xiphophorus_couchianus
ENSDARG00000008560	brap	97	79.478	ENSXMAG00000005915	brap	100	78.305	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function