EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000008740 (Gene tree)
Gene ID: 326718
Gene Symbol: esf1
Alias: fe06g12|im:7138472|wu:fe06g12|zgc:66241
Full Name: ESF1%2C nucleolar pre-rRNA processing protein%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 16982 bases
Position: chr1:51202984-51219965
Accession: ZDB-GENE-030131-4917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113328	NUC153	PF08159.12	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000146612	-	2515	-	ENSDARP00000113328	757 (aa)	-	B8JKQ1
ENSDART00000141856	-	593	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000008740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000008740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000008740	esf1	87	68.831	ENSG00000089048	ESF1	74	67.568	Homo_sapiens
ENSDARG00000008740	esf1	68	62.147	ENSAPOG00000003004	esf1	99	60.829	Acanthochromis_polyacanthus
ENSDARG00000008740	esf1	90	69.444	ENSAMEG00000008830	ESF1	74	68.919	Ailuropoda_melanoleuca
ENSDARG00000008740	esf1	99	62.846	ENSACIG00000018305	esf1	80	66.781	Amphilophus_citrinellus
ENSDARG00000008740	esf1	99	59.508	ENSAOCG00000006033	esf1	99	66.214	Amphiprion_ocellaris
ENSDARG00000008740	esf1	99	58.052	ENSAPEG00000022385	esf1	85	59.663	Amphiprion_percula
ENSDARG00000008740	esf1	79	64.320	ENSATEG00000016321	esf1	76	65.620	Anabas_testudineus
ENSDARG00000008740	esf1	87	67.059	ENSAPLG00000012113	ESF1	75	68.919	Anas_platyrhynchos
ENSDARG00000008740	esf1	89	64.835	ENSACAG00000000963	ESF1	75	71.622	Anolis_carolinensis
ENSDARG00000008740	esf1	89	64.706	ENSANAG00000036778	ESF1	74	67.568	Aotus_nancymaae
ENSDARG00000008740	esf1	99	60.129	ENSACLG00000002972	esf1	78	63.283	Astatotilapia_calliptera
ENSDARG00000008740	esf1	76	72.806	ENSAMXG00000001172	esf1	100	67.539	Astyanax_mexicanus
ENSDARG00000008740	esf1	86	69.444	ENSBTAG00000007130	ESF1	73	68.919	Bos_taurus
ENSDARG00000008740	esf1	88	64.706	ENSCJAG00000004640	ESF1	74	67.568	Callithrix_jacchus
ENSDARG00000008740	esf1	86	68.056	ENSCAFG00000005587	ESF1	74	67.568	Canis_familiaris
ENSDARG00000008740	esf1	86	68.056	ENSCAFG00020027530	ESF1	74	67.568	Canis_lupus_dingo
ENSDARG00000008740	esf1	86	68.056	ENSCHIG00000021188	ESF1	76	67.568	Capra_hircus
ENSDARG00000008740	esf1	86	68.056	ENSTSYG00000009956	ESF1	74	67.568	Carlito_syrichta
ENSDARG00000008740	esf1	76	54.374	ENSCAPG00000010333	-	78	54.217	Cavia_aperea
ENSDARG00000008740	esf1	86	66.667	ENSCAPG00000010466	-	51	66.216	Cavia_aperea
ENSDARG00000008740	esf1	86	65.278	ENSCPOG00000014027	-	75	64.865	Cavia_porcellus
ENSDARG00000008740	esf1	88	64.706	ENSCCAG00000024521	ESF1	74	67.568	Cebus_capucinus
ENSDARG00000008740	esf1	86	68.056	ENSCATG00000042792	ESF1	74	67.568	Cercocebus_atys
ENSDARG00000008740	esf1	86	68.056	ENSCLAG00000013266	-	75	67.568	Chinchilla_lanigera
ENSDARG00000008740	esf1	86	68.056	ENSCSAG00000011777	ESF1	74	67.568	Chlorocebus_sabaeus
ENSDARG00000008740	esf1	79	43.564	ENSCSAVG00000009015	-	69	46.903	Ciona_savignyi
ENSDARG00000008740	esf1	86	68.056	ENSCANG00000030674	ESF1	74	67.568	Colobus_angolensis_palliatus
ENSDARG00000008740	esf1	86	66.667	ENSCGRG00001018257	Esf1	75	66.216	Cricetulus_griseus_chok1gshd
ENSDARG00000008740	esf1	76	62.063	ENSCSEG00000001159	esf1	98	56.533	Cynoglossus_semilaevis
ENSDARG00000008740	esf1	86	69.444	ENSDNOG00000019409	ESF1	74	68.919	Dasypus_novemcinctus
ENSDARG00000008740	esf1	86	68.056	ENSDORG00000016313	Esf1	75	67.568	Dipodomys_ordii
ENSDARG00000008740	esf1	99	38.035	FBgn0024364	CG11417	77	36.928	Drosophila_melanogaster
ENSDARG00000008740	esf1	87	71.605	ENSEBUG00000015161	esf1	77	76.119	Eptatretus_burgeri
ENSDARG00000008740	esf1	86	70.833	ENSEASG00005001777	ESF1	76	70.270	Equus_asinus_asinus
ENSDARG00000008740	esf1	86	70.833	ENSECAG00000019188	ESF1	76	70.270	Equus_caballus
ENSDARG00000008740	esf1	67	52.315	ENSEEUG00000015837	-	75	50.000	Erinaceus_europaeus
ENSDARG00000008740	esf1	76	65.733	ENSELUG00000000408	esf1	73	64.145	Esox_lucius
ENSDARG00000008740	esf1	86	69.014	ENSFCAG00000000919	ESF1	74	68.919	Felis_catus
ENSDARG00000008740	esf1	85	73.529	ENSFALG00000010914	ESF1	74	67.568	Ficedula_albicollis
ENSDARG00000008740	esf1	86	68.056	ENSFDAG00000014777	ESF1	76	67.568	Fukomys_damarensis
ENSDARG00000008740	esf1	68	64.797	ENSFHEG00000014984	esf1	99	65.444	Fundulus_heteroclitus
ENSDARG00000008740	esf1	87	64.286	ENSGALG00000034768	ESF1	74	64.865	Gallus_gallus
ENSDARG00000008740	esf1	77	60.496	ENSGAFG00000000540	esf1	99	55.852	Gambusia_affinis
ENSDARG00000008740	esf1	86	68.056	ENSGGOG00000006692	ESF1	74	67.568	Gorilla_gorilla
ENSDARG00000008740	esf1	99	60.462	ENSHBUG00000001890	esf1	99	59.293	Haplochromis_burtoni
ENSDARG00000008740	esf1	86	69.444	ENSHGLG00000011505	ESF1	76	68.919	Heterocephalus_glaber_female
ENSDARG00000008740	esf1	86	69.444	ENSHGLG00100015045	ESF1	76	68.919	Heterocephalus_glaber_male
ENSDARG00000008740	esf1	100	65.816	ENSIPUG00000006507	esf1	100	65.944	Ictalurus_punctatus
ENSDARG00000008740	esf1	86	68.056	ENSSTOG00000009846	ESF1	75	67.568	Ictidomys_tridecemlineatus
ENSDARG00000008740	esf1	86	68.056	ENSJJAG00000012570	Esf1	74	67.568	Jaculus_jaculus
ENSDARG00000008740	esf1	87	74.390	ENSLACG00000016439	ESF1	77	76.389	Latimeria_chalumnae
ENSDARG00000008740	esf1	76	65.188	ENSLOCG00000015979	esf1	73	66.667	Lepisosteus_oculatus
ENSDARG00000008740	esf1	89	66.667	ENSLAFG00000005479	ESF1	79	66.216	Loxodonta_africana
ENSDARG00000008740	esf1	86	68.056	ENSMFAG00000036841	ESF1	74	67.568	Macaca_fascicularis
ENSDARG00000008740	esf1	86	68.056	ENSMNEG00000044042	ESF1	74	67.568	Macaca_nemestrina
ENSDARG00000008740	esf1	86	66.667	ENSMLEG00000037121	ESF1	74	66.216	Mandrillus_leucophaeus
ENSDARG00000008740	esf1	99	63.918	ENSMAMG00000018648	esf1	99	66.344	Mastacembelus_armatus
ENSDARG00000008740	esf1	68	65.049	ENSMZEG00005013912	esf1	99	63.495	Maylandia_zebra
ENSDARG00000008740	esf1	91	65.882	ENSMGAG00000004291	ESF1	74	66.216	Meleagris_gallopavo
ENSDARG00000008740	esf1	86	68.056	ENSMAUG00000015975	Esf1	77	67.568	Mesocricetus_auratus
ENSDARG00000008740	esf1	86	68.056	ENSMICG00000010711	ESF1	74	67.568	Microcebus_murinus
ENSDARG00000008740	esf1	86	68.056	ENSMOCG00000005902	Esf1	76	67.568	Microtus_ochrogaster
ENSDARG00000008740	esf1	68	64.190	ENSMMOG00000018693	esf1	99	63.238	Mola_mola
ENSDARG00000008740	esf1	88	65.517	ENSMODG00000005066	ESF1	77	68.919	Monodelphis_domestica
ENSDARG00000008740	esf1	91	58.416	ENSMALG00000007338	esf1	92	56.787	Monopterus_albus
ENSDARG00000008740	esf1	86	68.056	MGP_CAROLIEiJ_G0024365	Esf1	74	67.568	Mus_caroli
ENSDARG00000008740	esf1	86	69.444	ENSMUSG00000045624	Esf1	74	68.919	Mus_musculus
ENSDARG00000008740	esf1	86	68.056	MGP_PahariEiJ_G0025810	Esf1	75	67.568	Mus_pahari
ENSDARG00000008740	esf1	86	69.444	MGP_SPRETEiJ_G0025285	Esf1	75	68.919	Mus_spretus
ENSDARG00000008740	esf1	86	69.444	ENSMPUG00000001450	ESF1	74	68.919	Mustela_putorius_furo
ENSDARG00000008740	esf1	86	68.056	ENSMLUG00000013080	ESF1	74	67.568	Myotis_lucifugus
ENSDARG00000008740	esf1	86	68.056	ENSNLEG00000014563	ESF1	73	67.568	Nomascus_leucogenys
ENSDARG00000008740	esf1	69	56.333	ENSOPRG00000004862	ESF1	99	57.034	Ochotona_princeps
ENSDARG00000008740	esf1	86	68.056	ENSODEG00000006824	ESF1	77	67.568	Octodon_degus
ENSDARG00000008740	esf1	99	61.352	ENSONIG00000006804	esf1	77	64.815	Oreochromis_niloticus
ENSDARG00000008740	esf1	90	63.000	ENSOANG00000008432	-	75	72.973	Ornithorhynchus_anatinus
ENSDARG00000008740	esf1	90	68.056	ENSOCUG00000005414	ESF1	79	67.568	Oryctolagus_cuniculus
ENSDARG00000008740	esf1	68	60.600	ENSORLG00000018625	esf1	99	59.662	Oryzias_latipes
ENSDARG00000008740	esf1	76	62.312	ENSORLG00015022826	esf1	81	61.809	Oryzias_latipes_hsok
ENSDARG00000008740	esf1	68	60.943	ENSOMEG00000009311	esf1	99	59.211	Oryzias_melastigma
ENSDARG00000008740	esf1	86	66.667	ENSOGAG00000016912	ESF1	76	66.216	Otolemur_garnettii
ENSDARG00000008740	esf1	86	68.056	ENSOARG00000011158	ESF1	72	67.568	Ovis_aries
ENSDARG00000008740	esf1	86	68.056	ENSPPAG00000024379	ESF1	74	67.568	Pan_paniscus
ENSDARG00000008740	esf1	86	69.014	ENSPPRG00000012007	ESF1	74	68.919	Panthera_pardus
ENSDARG00000008740	esf1	86	69.014	ENSPTIG00000020063	ESF1	74	68.919	Panthera_tigris_altaica
ENSDARG00000008740	esf1	86	68.056	ENSPTRG00000013258	ESF1	74	67.568	Pan_troglodytes
ENSDARG00000008740	esf1	100	61.194	ENSPKIG00000024448	esf1	69	67.233	Paramormyrops_kingsleyae
ENSDARG00000008740	esf1	80	53.462	ENSPMGG00000016911	esf1	72	52.324	Periophthalmus_magnuspinnatus
ENSDARG00000008740	esf1	86	70.833	ENSPCIG00000019331	ESF1	76	70.270	Phascolarctos_cinereus
ENSDARG00000008740	esf1	99	54.880	ENSPFOG00000010101	esf1	79	59.038	Poecilia_formosa
ENSDARG00000008740	esf1	68	63.056	ENSPLAG00000006452	esf1	99	60.659	Poecilia_latipinna
ENSDARG00000008740	esf1	99	58.365	ENSPMEG00000000713	esf1	99	56.101	Poecilia_mexicana
ENSDARG00000008740	esf1	81	61.442	ENSPREG00000004431	esf1	98	57.014	Poecilia_reticulata
ENSDARG00000008740	esf1	86	68.056	ENSPPYG00000010715	ESF1	74	67.568	Pongo_abelii
ENSDARG00000008740	esf1	78	68.908	ENSPVAG00000001295	ESF1	67	67.568	Pteropus_vampyrus
ENSDARG00000008740	esf1	99	60.875	ENSPNYG00000015735	esf1	99	58.901	Pundamilia_nyererei
ENSDARG00000008740	esf1	76	73.019	ENSPNAG00000014721	esf1	75	72.727	Pygocentrus_nattereri
ENSDARG00000008740	esf1	86	68.056	ENSRNOG00000004777	Esf1	74	67.568	Rattus_norvegicus
ENSDARG00000008740	esf1	86	68.056	ENSRBIG00000035763	ESF1	74	67.568	Rhinopithecus_bieti
ENSDARG00000008740	esf1	86	68.056	ENSRROG00000032022	ESF1	74	67.568	Rhinopithecus_roxellana
ENSDARG00000008740	esf1	86	68.056	ENSSBOG00000030387	ESF1	74	67.568	Saimiri_boliviensis_boliviensis
ENSDARG00000008740	esf1	91	70.833	ENSSHAG00000000449	ESF1	79	70.270	Sarcophilus_harrisii
ENSDARG00000008740	esf1	78	65.662	ENSSDUG00000019460	esf1	81	65.128	Seriola_dumerili
ENSDARG00000008740	esf1	99	57.494	ENSSPAG00000019077	esf1	81	63.166	Stegastes_partitus
ENSDARG00000008740	esf1	86	69.444	ENSSSCG00000007077	ESF1	73	68.919	Sus_scrofa
ENSDARG00000008740	esf1	86	66.667	ENSTGUG00000002450	ESF1	73	66.216	Taeniopygia_guttata
ENSDARG00000008740	esf1	100	56.275	ENSTRUG00000009445	esf1	77	60.208	Takifugu_rubripes
ENSDARG00000008740	esf1	62	70.000	ENSTBEG00000008552	ESF1	54	68.750	Tupaia_belangeri
ENSDARG00000008740	esf1	86	69.444	ENSTTRG00000005335	ESF1	74	68.919	Tursiops_truncatus
ENSDARG00000008740	esf1	86	68.056	ENSUMAG00000008579	ESF1	74	67.568	Ursus_maritimus
ENSDARG00000008740	esf1	76	69.841	ENSVPAG00000005291	ESF1	66	67.984	Vicugna_pacos
ENSDARG00000008740	esf1	86	68.056	ENSVVUG00000014318	ESF1	69	67.568	Vulpes_vulpes
ENSDARG00000008740	esf1	99	54.248	ENSXMAG00000017651	esf1	77	57.785	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0006364	rRNA processing	-	IEA	Process