EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000008904 (Gene tree)
Gene ID: 334032
Gene Symbol: smarca2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 145203 bases
Position: chr5:45138934-45284136
Accession: ZDB-GENE-030131-5964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000041411	BRK	PF07533.16	3.1e-17	1	1
ENSDARP00000133519	BRK	PF07533.16	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000041412	-	6051	-	ENSDARP00000041411	1568 (aa)	-	Q1MTE3
ENSDART00000136002	-	663	-	ENSDARP00000112752	170 (aa)	-	F6PBX5
ENSDART00000172702	-	4830	XM_009301625	ENSDARP00000133519	1604 (aa)	XP_009299900	A0A0R4IJ25
ENSDART00000113738	-	823	-	ENSDARP00000102553	258 (aa)	-	F6NTB4

Gene Model

Click here to download ENSDARG00000008904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000008904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000008904	smarca2	94	72.933	ENSDARG00000077226	smarca4a	100	72.185
ENSDARG00000008904	smarca2	92	73.049	ENSDARG00000104339	SMARCA4	94	73.663

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000008904	smarca2	97	81.707	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSDARG00000008904	smarca2	100	84.577	ENSAPOG00000002641	SMARCA2	100	85.266	Acanthochromis_polyacanthus
ENSDARG00000008904	smarca2	80	86.854	ENSAMEG00000012325	SMARCA2	99	86.980	Ailuropoda_melanoleuca
ENSDARG00000008904	smarca2	100	82.158	ENSACIG00000015607	SMARCA2	100	83.302	Amphilophus_citrinellus
ENSDARG00000008904	smarca2	100	84.461	ENSAOCG00000009647	-	100	84.774	Amphiprion_ocellaris
ENSDARG00000008904	smarca2	100	84.504	ENSAPEG00000007646	SMARCA2	100	84.881	Amphiprion_percula
ENSDARG00000008904	smarca2	99	85.079	ENSATEG00000006916	SMARCA2	98	85.260	Anabas_testudineus
ENSDARG00000008904	smarca2	87	80.808	ENSAPLG00000013873	SMARCA2	93	80.856	Anas_platyrhynchos
ENSDARG00000008904	smarca2	97	82.403	ENSACAG00000002423	SMARCA2	100	81.962	Anolis_carolinensis
ENSDARG00000008904	smarca2	97	81.995	ENSANAG00000026498	SMARCA2	100	81.784	Aotus_nancymaae
ENSDARG00000008904	smarca2	100	83.521	ENSACLG00000004248	SMARCA2	100	84.669	Astatotilapia_calliptera
ENSDARG00000008904	smarca2	100	91.704	ENSAMXG00000012404	smarca2	100	91.830	Astyanax_mexicanus
ENSDARG00000008904	smarca2	97	82.521	ENSBTAG00000007494	SMARCA2	100	82.491	Bos_taurus
ENSDARG00000008904	smarca2	97	82.020	ENSCJAG00000010710	SMARCA2	100	81.414	Callithrix_jacchus
ENSDARG00000008904	smarca2	97	82.521	ENSCAFG00000002013	SMARCA2	100	82.491	Canis_familiaris
ENSDARG00000008904	smarca2	74	87.457	ENSCAFG00020026802	SMARCA2	94	87.554	Canis_lupus_dingo
ENSDARG00000008904	smarca2	97	82.521	ENSCHIG00000025863	SMARCA2	100	82.491	Capra_hircus
ENSDARG00000008904	smarca2	97	79.180	ENSTSYG00000003858	SMARCA2	99	81.542	Carlito_syrichta
ENSDARG00000008904	smarca2	97	79.961	ENSCAPG00000002890	SMARCA2	99	80.000	Cavia_aperea
ENSDARG00000008904	smarca2	97	82.311	ENSCPOG00000005475	SMARCA2	100	82.249	Cavia_porcellus
ENSDARG00000008904	smarca2	97	82.071	ENSCCAG00000030636	SMARCA2	100	81.858	Cebus_capucinus
ENSDARG00000008904	smarca2	97	82.296	ENSCATG00000031470	SMARCA2	100	81.950	Cercocebus_atys
ENSDARG00000008904	smarca2	97	82.066	ENSCLAG00000014484	SMARCA2	100	82.024	Chinchilla_lanigera
ENSDARG00000008904	smarca2	91	83.403	ENSCSAG00000008650	SMARCA2	99	83.098	Chlorocebus_sabaeus
ENSDARG00000008904	smarca2	83	82.179	ENSCHOG00000004316	SMARCA2	86	82.179	Choloepus_hoffmanni
ENSDARG00000008904	smarca2	97	82.783	ENSCPBG00000025463	SMARCA2	100	82.650	Chrysemys_picta_bellii
ENSDARG00000008904	smarca2	97	82.425	ENSCANG00000039597	SMARCA2	100	82.242	Colobus_angolensis_palliatus
ENSDARG00000008904	smarca2	81	81.847	ENSCGRG00001002323	Smarca2	100	76.307	Cricetulus_griseus_chok1gshd
ENSDARG00000008904	smarca2	99	80.383	ENSCSEG00000019311	SMARCA2	98	80.511	Cynoglossus_semilaevis
ENSDARG00000008904	smarca2	85	81.296	ENSCVAG00000016571	SMARCA2	98	81.811	Cyprinodon_variegatus
ENSDARG00000008904	smarca2	97	81.562	ENSDNOG00000006402	SMARCA2	100	81.984	Dasypus_novemcinctus
ENSDARG00000008904	smarca2	97	81.983	ENSDORG00000014832	Smarca2	100	81.875	Dipodomys_ordii
ENSDARG00000008904	smarca2	77	62.264	FBgn0000212	brm	86	54.496	Drosophila_melanogaster
ENSDARG00000008904	smarca2	87	60.873	ENSEBUG00000002449	-	99	60.788	Eptatretus_burgeri
ENSDARG00000008904	smarca2	95	69.150	ENSEBUG00000011442	-	97	67.966	Eptatretus_burgeri
ENSDARG00000008904	smarca2	97	82.261	ENSEASG00005010312	SMARCA2	100	82.301	Equus_asinus_asinus
ENSDARG00000008904	smarca2	61	85.294	ENSEEUG00000015540	-	70	88.462	Erinaceus_europaeus
ENSDARG00000008904	smarca2	93	84.600	ENSELUG00000010318	smarca2	99	82.167	Esox_lucius
ENSDARG00000008904	smarca2	97	82.456	ENSFCAG00000001568	SMARCA2	100	82.427	Felis_catus
ENSDARG00000008904	smarca2	97	82.219	ENSFALG00000010416	SMARCA2	100	84.071	Ficedula_albicollis
ENSDARG00000008904	smarca2	97	80.955	ENSFDAG00000010502	SMARCA2	100	78.996	Fukomys_damarensis
ENSDARG00000008904	smarca2	100	83.230	ENSFHEG00000021250	SMARCA2	100	83.727	Fundulus_heteroclitus
ENSDARG00000008904	smarca2	99	80.266	ENSGMOG00000014229	SMARCA2	99	80.063	Gadus_morhua
ENSDARG00000008904	smarca2	97	82.521	ENSGALG00000010164	SMARCA2	100	82.807	Gallus_gallus
ENSDARG00000008904	smarca2	95	77.866	ENSGAFG00000001164	SMARCA2	92	92.222	Gambusia_affinis
ENSDARG00000008904	smarca2	99	83.133	ENSGACG00000014488	SMARCA2	99	83.122	Gasterosteus_aculeatus
ENSDARG00000008904	smarca2	97	82.718	ENSGAGG00000024412	SMARCA2	100	82.587	Gopherus_agassizii
ENSDARG00000008904	smarca2	78	88.235	ENSGGOG00000000513	SMARCA2	84	87.130	Gorilla_gorilla
ENSDARG00000008904	smarca2	100	84.375	ENSHBUG00000006691	SMARCA2	100	85.000	Haplochromis_burtoni
ENSDARG00000008904	smarca2	97	81.165	ENSHGLG00000005215	SMARCA2	98	81.481	Heterocephalus_glaber_female
ENSDARG00000008904	smarca2	97	82.303	ENSHGLG00100010496	SMARCA2	100	82.025	Heterocephalus_glaber_male
ENSDARG00000008904	smarca2	89	78.014	ENSHCOG00000015348	-	92	89.098	Hippocampus_comes
ENSDARG00000008904	smarca2	99	90.039	ENSIPUG00000011060	smarca2	100	88.889	Ictalurus_punctatus
ENSDARG00000008904	smarca2	97	81.924	ENSSTOG00000006812	SMARCA2	100	81.414	Ictidomys_tridecemlineatus
ENSDARG00000008904	smarca2	97	81.889	ENSJJAG00000010867	Smarca2	100	81.875	Jaculus_jaculus
ENSDARG00000008904	smarca2	100	82.992	ENSKMAG00000015844	-	100	83.509	Kryptolebias_marmoratus
ENSDARG00000008904	smarca2	97	86.297	ENSLOCG00000011499	smarca2	100	85.892	Lepisosteus_oculatus
ENSDARG00000008904	smarca2	97	80.843	ENSLAFG00000014061	SMARCA2	100	81.250	Loxodonta_africana
ENSDARG00000008904	smarca2	80	88.082	ENSMFAG00000003814	SMARCA2	100	81.479	Macaca_fascicularis
ENSDARG00000008904	smarca2	97	82.242	ENSMMUG00000015279	SMARCA2	100	82.305	Macaca_mulatta
ENSDARG00000008904	smarca2	97	81.960	ENSMNEG00000041069	SMARCA2	100	82.042	Macaca_nemestrina
ENSDARG00000008904	smarca2	91	88.235	ENSMLEG00000027418	SMARCA2	100	81.294	Mandrillus_leucophaeus
ENSDARG00000008904	smarca2	100	83.933	ENSMAMG00000003056	SMARCA2	100	84.677	Mastacembelus_armatus
ENSDARG00000008904	smarca2	100	84.596	ENSMZEG00005020709	SMARCA2	100	85.285	Maylandia_zebra
ENSDARG00000008904	smarca2	74	69.456	ENSMGAG00000005160	-	100	69.323	Meleagris_gallopavo
ENSDARG00000008904	smarca2	97	82.456	ENSMICG00000005162	SMARCA2	100	82.231	Microcebus_murinus
ENSDARG00000008904	smarca2	97	82.189	ENSMOCG00000001611	Smarca2	100	82.116	Microtus_ochrogaster
ENSDARG00000008904	smarca2	99	81.041	ENSMMOG00000014196	SMARCA2	99	81.439	Mola_mola
ENSDARG00000008904	smarca2	97	82.532	ENSMODG00000003578	SMARCA2	100	82.479	Monodelphis_domestica
ENSDARG00000008904	smarca2	99	82.697	ENSMALG00000009611	SMARCA2	99	83.164	Monopterus_albus
ENSDARG00000008904	smarca2	84	86.384	MGP_CAROLIEiJ_G0022841	Smarca2	100	81.149	Mus_caroli
ENSDARG00000008904	smarca2	84	85.789	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSDARG00000008904	smarca2	97	81.548	MGP_PahariEiJ_G0014334	Smarca2	100	81.595	Mus_pahari
ENSDARG00000008904	smarca2	83	87.500	MGP_SPRETEiJ_G0023759	Smarca2	97	90.909	Mus_spretus
ENSDARG00000008904	smarca2	80	86.719	ENSMPUG00000005171	SMARCA2	94	86.824	Mustela_putorius_furo
ENSDARG00000008904	smarca2	97	77.608	ENSMLUG00000002342	SMARCA2	99	77.966	Myotis_lucifugus
ENSDARG00000008904	smarca2	97	79.847	ENSNGAG00000000108	Smarca2	99	79.328	Nannospalax_galili
ENSDARG00000008904	smarca2	95	73.329	ENSNBRG00000017998	SMARCA2	94	81.592	Neolamprologus_brichardi
ENSDARG00000008904	smarca2	80	87.322	ENSNLEG00000008575	SMARCA2	100	81.001	Nomascus_leucogenys
ENSDARG00000008904	smarca2	97	75.370	ENSMEUG00000009812	SMARCA2	100	75.376	Notamacropus_eugenii
ENSDARG00000008904	smarca2	80	82.938	ENSOPRG00000013474	SMARCA2	100	77.646	Ochotona_princeps
ENSDARG00000008904	smarca2	82	86.472	ENSODEG00000005452	SMARCA2	98	81.512	Octodon_degus
ENSDARG00000008904	smarca2	99	84.601	ENSONIG00000014163	SMARCA2	99	84.789	Oreochromis_niloticus
ENSDARG00000008904	smarca2	97	81.150	ENSOCUG00000006320	SMARCA2	100	81.898	Oryctolagus_cuniculus
ENSDARG00000008904	smarca2	100	83.145	ENSORLG00000020820	SMARCA2	100	83.887	Oryzias_latipes
ENSDARG00000008904	smarca2	100	83.104	ENSORLG00015006289	SMARCA2	100	84.033	Oryzias_latipes_hsok
ENSDARG00000008904	smarca2	100	84.045	ENSOMEG00000009736	-	100	84.412	Oryzias_melastigma
ENSDARG00000008904	smarca2	80	87.639	ENSOGAG00000017053	SMARCA2	99	80.088	Otolemur_garnettii
ENSDARG00000008904	smarca2	97	81.635	ENSOARG00000013265	SMARCA2	100	81.629	Ovis_aries
ENSDARG00000008904	smarca2	79	88.212	ENSPPAG00000038717	SMARCA2	100	79.738	Pan_paniscus
ENSDARG00000008904	smarca2	97	82.521	ENSPPRG00000001879	SMARCA2	100	82.491	Panthera_pardus
ENSDARG00000008904	smarca2	97	81.620	ENSPTRG00000051168	SMARCA2	100	81.830	Pan_troglodytes
ENSDARG00000008904	smarca2	97	76.720	ENSPANG00000025121	SMARCA2	100	77.058	Papio_anubis
ENSDARG00000008904	smarca2	100	86.968	ENSPKIG00000018469	-	100	86.840	Paramormyrops_kingsleyae
ENSDARG00000008904	smarca2	97	82.482	ENSPSIG00000006284	SMARCA2	100	82.357	Pelodiscus_sinensis
ENSDARG00000008904	smarca2	98	79.228	ENSPMGG00000013696	-	97	79.330	Periophthalmus_magnuspinnatus
ENSDARG00000008904	smarca2	97	81.113	ENSPEMG00000019821	Smarca2	100	80.905	Peromyscus_maniculatus_bairdii
ENSDARG00000008904	smarca2	94	70.218	ENSPMAG00000005337	-	96	70.463	Petromyzon_marinus
ENSDARG00000008904	smarca2	97	82.727	ENSPCIG00000015658	SMARCA2	100	82.669	Phascolarctos_cinereus
ENSDARG00000008904	smarca2	100	83.167	ENSPFOG00000001856	SMARCA2	100	83.645	Poecilia_formosa
ENSDARG00000008904	smarca2	99	82.737	ENSPLAG00000017829	SMARCA2	98	81.174	Poecilia_latipinna
ENSDARG00000008904	smarca2	99	82.601	ENSPMEG00000001815	-	99	82.776	Poecilia_mexicana
ENSDARG00000008904	smarca2	100	82.054	ENSPREG00000013800	SMARCA2	100	82.477	Poecilia_reticulata
ENSDARG00000008904	smarca2	97	81.712	ENSPPYG00000019258	SMARCA2	100	81.533	Pongo_abelii
ENSDARG00000008904	smarca2	76	74.296	ENSPCAG00000016969	SMARCA2	78	74.296	Procavia_capensis
ENSDARG00000008904	smarca2	97	80.507	ENSPCOG00000025709	SMARCA2	100	80.341	Propithecus_coquereli
ENSDARG00000008904	smarca2	91	83.400	ENSPVAG00000000901	SMARCA2	94	83.531	Pteropus_vampyrus
ENSDARG00000008904	smarca2	100	82.201	ENSPNYG00000004533	SMARCA2	100	82.704	Pundamilia_nyererei
ENSDARG00000008904	smarca2	99	92.224	ENSPNAG00000014635	smarca2	98	92.288	Pygocentrus_nattereri
ENSDARG00000008904	smarca2	97	80.612	ENSRNOG00000011931	Smarca2	100	80.409	Rattus_norvegicus
ENSDARG00000008904	smarca2	97	81.274	ENSRBIG00000038618	SMARCA2	95	86.455	Rhinopithecus_bieti
ENSDARG00000008904	smarca2	97	81.379	ENSRROG00000019271	SMARCA2	99	82.311	Rhinopithecus_roxellana
ENSDARG00000008904	smarca2	91	88.003	ENSSBOG00000034827	SMARCA2	100	80.973	Saimiri_boliviensis_boliviensis
ENSDARG00000008904	smarca2	97	82.846	ENSSHAG00000007884	SMARCA2	100	82.595	Sarcophilus_harrisii
ENSDARG00000008904	smarca2	89	88.810	ENSSFOG00015014870	SMARCA2	97	88.738	Scleropages_formosus
ENSDARG00000008904	smarca2	100	83.106	ENSSMAG00000013707	SMARCA2	100	83.911	Scophthalmus_maximus
ENSDARG00000008904	smarca2	100	82.511	ENSSDUG00000008852	-	100	83.181	Seriola_dumerili
ENSDARG00000008904	smarca2	99	81.024	ENSSLDG00000025449	SMARCA2	98	81.336	Seriola_lalandi_dorsalis
ENSDARG00000008904	smarca2	93	76.163	ENSSARG00000007888	SMARCA2	93	78.523	Sorex_araneus
ENSDARG00000008904	smarca2	98	78.337	ENSSPUG00000001629	SMARCA2	98	80.305	Sphenodon_punctatus
ENSDARG00000008904	smarca2	100	85.303	ENSSPAG00000020091	-	100	85.616	Stegastes_partitus
ENSDARG00000008904	smarca2	97	82.238	ENSSSCG00000005232	SMARCA2	100	82.405	Sus_scrofa
ENSDARG00000008904	smarca2	97	82.025	ENSTGUG00000005460	SMARCA2	100	82.680	Taeniopygia_guttata
ENSDARG00000008904	smarca2	99	82.487	ENSTRUG00000015619	SMARCA2	100	82.696	Takifugu_rubripes
ENSDARG00000008904	smarca2	62	100.000	ENSTBEG00000008767	SMARCA2	68	100.000	Tupaia_belangeri
ENSDARG00000008904	smarca2	93	82.373	ENSTTRG00000002033	SMARCA2	95	82.244	Tursiops_truncatus
ENSDARG00000008904	smarca2	87	82.331	ENSUAMG00000024701	SMARCA2	99	82.006	Ursus_americanus
ENSDARG00000008904	smarca2	84	80.798	ENSVPAG00000001204	SMARCA2	98	75.365	Vicugna_pacos
ENSDARG00000008904	smarca2	74	87.039	ENSVVUG00000004598	SMARCA2	96	87.210	Vulpes_vulpes
ENSDARG00000008904	smarca2	98	78.482	ENSXETG00000015299	smarca2	100	78.044	Xenopus_tropicalis
ENSDARG00000008904	smarca2	90	81.307	ENSXCOG00000011073	SMARCA2	99	81.246	Xiphophorus_couchianus
ENSDARG00000008904	smarca2	100	82.088	ENSXMAG00000015611	SMARCA2	100	82.571	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006338	chromatin remodeling	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0016514	SWI/SNF complex	-	IEA	Component
GO:0016817	hydrolase activity, acting on acid anhydrides	-	IEA	Function
GO:0016887	ATPase activity	-	IEA	Function
GO:0042393	histone binding	-	IEA	Function