EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000008920 (Gene tree)
Gene ID: 447915
Gene Symbol: mrpl53
Alias: zgc:103761
Full Name: mitochondrial ribosomal protein L53
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6523 bases
Position: chr19:32158010-32164532
Accession: ZDB-GENE-040912-93
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000025933	MRP_L53	PF10780.9	5.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000005255	-	396	-	ENSDARP00000025933	108 (aa)	-	Q66I54

Gene Model

Click here to download ENSDARG00000008920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000008920's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000008920	mrpl53	100	71.296	ENSAPOG00000018686	mrpl53	100	71.296	Acanthochromis_polyacanthus
ENSDARG00000008920	mrpl53	100	67.593	ENSACIG00000015651	mrpl53	100	67.593	Amphilophus_citrinellus
ENSDARG00000008920	mrpl53	100	73.148	ENSAOCG00000015743	mrpl53	100	73.148	Amphiprion_ocellaris
ENSDARG00000008920	mrpl53	100	73.148	ENSAPEG00000011361	mrpl53	100	73.148	Amphiprion_percula
ENSDARG00000008920	mrpl53	100	62.963	ENSATEG00000013631	mrpl53	100	62.963	Anabas_testudineus
ENSDARG00000008920	mrpl53	100	68.519	ENSACLG00000015516	mrpl53	100	68.519	Astatotilapia_calliptera
ENSDARG00000008920	mrpl53	100	70.370	ENSAMXG00000036162	mrpl53	100	70.370	Astyanax_mexicanus
ENSDARG00000008920	mrpl53	98	52.830	ENSCPBG00000007276	-	96	52.830	Chrysemys_picta_bellii
ENSDARG00000008920	mrpl53	100	72.222	ENSCSEG00000017619	mrpl53	92	72.222	Cynoglossus_semilaevis
ENSDARG00000008920	mrpl53	100	64.815	ENSCVAG00000002869	mrpl53	100	64.815	Cyprinodon_variegatus
ENSDARG00000008920	mrpl53	93	35.556	ENSEBUG00000009798	mrpl53	96	35.556	Eptatretus_burgeri
ENSDARG00000008920	mrpl53	99	67.290	ENSELUG00000003794	mrpl53	99	67.290	Esox_lucius
ENSDARG00000008920	mrpl53	95	52.427	ENSFALG00000008629	-	94	52.427	Ficedula_albicollis
ENSDARG00000008920	mrpl53	100	65.741	ENSFHEG00000012925	mrpl53	100	65.741	Fundulus_heteroclitus
ENSDARG00000008920	mrpl53	96	66.346	ENSGMOG00000003046	mrpl53	98	66.346	Gadus_morhua
ENSDARG00000008920	mrpl53	93	55.000	ENSGALG00000037867	MRPL53	93	55.000	Gallus_gallus
ENSDARG00000008920	mrpl53	100	64.815	ENSGAFG00000010591	mrpl53	100	64.815	Gambusia_affinis
ENSDARG00000008920	mrpl53	100	62.037	ENSGACG00000003453	mrpl53	100	62.037	Gasterosteus_aculeatus
ENSDARG00000008920	mrpl53	98	51.887	ENSGAGG00000013774	-	96	51.887	Gopherus_agassizii
ENSDARG00000008920	mrpl53	100	68.519	ENSHBUG00000002532	mrpl53	100	68.519	Haplochromis_burtoni
ENSDARG00000008920	mrpl53	99	70.093	ENSHCOG00000019265	mrpl53	100	70.093	Hippocampus_comes
ENSDARG00000008920	mrpl53	100	64.815	ENSIPUG00000001363	MRPL53	100	64.815	Ictalurus_punctatus
ENSDARG00000008920	mrpl53	100	62.963	ENSKMAG00000007151	mrpl53	73	62.963	Kryptolebias_marmoratus
ENSDARG00000008920	mrpl53	100	63.889	ENSLBEG00000018225	mrpl53	100	63.889	Labrus_bergylta
ENSDARG00000008920	mrpl53	100	64.815	ENSLACG00000008769	mrpl53	98	64.815	Latimeria_chalumnae
ENSDARG00000008920	mrpl53	97	62.857	ENSLOCG00000002871	mrpl53	97	62.857	Lepisosteus_oculatus
ENSDARG00000008920	mrpl53	99	68.224	ENSMAMG00000013973	mrpl53	100	68.224	Mastacembelus_armatus
ENSDARG00000008920	mrpl53	100	68.519	ENSMZEG00005028437	mrpl53	100	68.519	Maylandia_zebra
ENSDARG00000008920	mrpl53	100	68.519	ENSMZEG00005003657	mrpl53	100	68.519	Maylandia_zebra
ENSDARG00000008920	mrpl53	100	61.468	ENSMMOG00000018994	mrpl53	100	61.468	Mola_mola
ENSDARG00000008920	mrpl53	100	52.679	ENSMALG00000005152	mrpl53	100	52.679	Monopterus_albus
ENSDARG00000008920	mrpl53	100	68.519	ENSNBRG00000013184	mrpl53	100	68.519	Neolamprologus_brichardi
ENSDARG00000008920	mrpl53	98	68.868	ENSONIG00000002633	mrpl53	100	68.868	Oreochromis_niloticus
ENSDARG00000008920	mrpl53	100	62.037	ENSORLG00000028306	mrpl53	100	62.037	Oryzias_latipes
ENSDARG00000008920	mrpl53	100	61.111	ENSORLG00020006678	mrpl53	100	61.111	Oryzias_latipes_hni
ENSDARG00000008920	mrpl53	100	61.111	ENSORLG00015014629	mrpl53	100	61.111	Oryzias_latipes_hsok
ENSDARG00000008920	mrpl53	100	66.667	ENSOMEG00000012839	mrpl53	100	66.667	Oryzias_melastigma
ENSDARG00000008920	mrpl53	94	60.396	ENSPKIG00000006982	mrpl53	95	60.396	Paramormyrops_kingsleyae
ENSDARG00000008920	mrpl53	70	50.000	ENSPSIG00000013947	-	78	50.000	Pelodiscus_sinensis
ENSDARG00000008920	mrpl53	100	57.407	ENSPMGG00000022855	mrpl53	100	57.407	Periophthalmus_magnuspinnatus
ENSDARG00000008920	mrpl53	95	65.049	ENSPLAG00000006658	mrpl53	99	65.049	Poecilia_latipinna
ENSDARG00000008920	mrpl53	95	66.019	ENSPMEG00000002671	mrpl53	99	66.019	Poecilia_mexicana
ENSDARG00000008920	mrpl53	95	66.019	ENSPMEG00000016912	mrpl53	99	66.019	Poecilia_mexicana
ENSDARG00000008920	mrpl53	95	66.019	ENSPREG00000008114	mrpl53	99	66.019	Poecilia_reticulata
ENSDARG00000008920	mrpl53	100	68.519	ENSPNYG00000011866	mrpl53	100	68.519	Pundamilia_nyererei
ENSDARG00000008920	mrpl53	98	66.981	ENSPNAG00000010462	mrpl53	99	66.981	Pygocentrus_nattereri
ENSDARG00000008920	mrpl53	97	55.238	ENSSFOG00015004568	mrpl53	99	55.238	Scleropages_formosus
ENSDARG00000008920	mrpl53	100	63.889	ENSSMAG00000007790	mrpl53	100	63.889	Scophthalmus_maximus
ENSDARG00000008920	mrpl53	100	65.741	ENSSDUG00000011350	mrpl53	100	65.741	Seriola_dumerili
ENSDARG00000008920	mrpl53	100	62.963	ENSSLDG00000013473	mrpl53	100	62.963	Seriola_lalandi_dorsalis
ENSDARG00000008920	mrpl53	87	53.191	ENSSPUG00000009029	-	83	53.191	Sphenodon_punctatus
ENSDARG00000008920	mrpl53	100	69.444	ENSSPAG00000019879	mrpl53	92	69.444	Stegastes_partitus
ENSDARG00000008920	mrpl53	95	49.515	ENSTGUG00000011655	-	93	49.515	Taeniopygia_guttata
ENSDARG00000008920	mrpl53	95	49.515	ENSTGUG00000013874	-	93	49.515	Taeniopygia_guttata
ENSDARG00000008920	mrpl53	99	60.748	ENSTRUG00000014652	mrpl53	100	60.748	Takifugu_rubripes
ENSDARG00000008920	mrpl53	100	51.852	ENSXETG00000027254	mrpl53	100	51.852	Xenopus_tropicalis
ENSDARG00000008920	mrpl53	93	67.000	ENSXCOG00000020063	mrpl53	94	67.000	Xiphophorus_couchianus
ENSDARG00000008920	mrpl53	100	64.815	ENSXMAG00000024348	mrpl53	100	64.815	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0008150	biological_process	-	ND	Process