EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000009764 (Gene tree)
Gene ID: 445219
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 40825 bases
Position: chr5:55160348-55201172
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113861	RRM_1	PF00076.22	7.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000134937	-	1879	XM_005165655	ENSDARP00000113861	515 (aa)	XP_005165712	A2BIN4

Gene Model

Click here to download ENSDARG00000009764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000009764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000009764	srek1	54	79.643	ENSG00000153914	SREK1	85	82.353	Homo_sapiens
ENSDARG00000009764	srek1	54	46.953	ENSG00000116754	SRSF11	70	67.778	Homo_sapiens
ENSDARG00000009764	srek1	54	40.860	ENSAPOG00000004488	-	92	58.559	Acanthochromis_polyacanthus
ENSDARG00000009764	srek1	54	79.643	ENSAMEG00000011327	SREK1	97	46.723	Ailuropoda_melanoleuca
ENSDARG00000009764	srek1	54	42.705	ENSAOCG00000010541	-	89	37.525	Amphiprion_ocellaris
ENSDARG00000009764	srek1	54	42.705	ENSAPEG00000003142	SRSF11	84	66.667	Amphiprion_percula
ENSDARG00000009764	srek1	54	41.577	ENSAPEG00000003619	SRSF11	92	58.559	Amphiprion_percula
ENSDARG00000009764	srek1	54	42.857	ENSATEG00000007534	-	92	58.559	Anabas_testudineus
ENSDARG00000009764	srek1	54	40.647	ENSATEG00000011691	srsf11	75	66.667	Anabas_testudineus
ENSDARG00000009764	srek1	83	53.531	ENSATEG00000009450	srek1	96	52.074	Anabas_testudineus
ENSDARG00000009764	srek1	73	70.312	ENSAPLG00000003948	-	70	80.142	Anas_platyrhynchos
ENSDARG00000009764	srek1	55	44.912	ENSACAG00000013654	SRSF11	93	39.489	Anolis_carolinensis
ENSDARG00000009764	srek1	54	46.595	ENSANAG00000018690	-	84	40.408	Aotus_nancymaae
ENSDARG00000009764	srek1	78	56.502	ENSANAG00000031358	SREK1	92	76.667	Aotus_nancymaae
ENSDARG00000009764	srek1	55	84.912	ENSACLG00000026754	srek1	96	84.912	Astatotilapia_calliptera
ENSDARG00000009764	srek1	100	67.619	ENSAMXG00000043877	srek1	100	70.532	Astyanax_mexicanus
ENSDARG00000009764	srek1	54	41.786	ENSAMXG00000008655	-	92	36.902	Astyanax_mexicanus
ENSDARG00000009764	srek1	54	46.237	ENSBTAG00000015474	SRSF11	84	40.204	Bos_taurus
ENSDARG00000009764	srek1	54	80.000	ENSBTAG00000007321	SREK1	85	82.353	Bos_taurus
ENSDARG00000009764	srek1	79	56.222	ENSCJAG00000015950	SREK1	92	76.667	Callithrix_jacchus
ENSDARG00000009764	srek1	55	46.099	ENSCJAG00000017704	SRSF11	70	40.408	Callithrix_jacchus
ENSDARG00000009764	srek1	54	79.643	ENSCAFG00000007560	SREK1	92	48.312	Canis_familiaris
ENSDARG00000009764	srek1	54	46.403	ENSCHIG00000025295	SRSF11	75	67.416	Capra_hircus
ENSDARG00000009764	srek1	54	44.086	ENSTSYG00000033270	-	84	52.985	Carlito_syrichta
ENSDARG00000009764	srek1	54	79.643	ENSTSYG00000036957	SREK1	92	75.410	Carlito_syrichta
ENSDARG00000009764	srek1	52	45.522	ENSCPOG00000009554	SRSF11	83	38.589	Cavia_porcellus
ENSDARG00000009764	srek1	54	79.152	ENSCPOG00000008925	SREK1	52	78.125	Cavia_porcellus
ENSDARG00000009764	srek1	54	46.595	ENSCCAG00000036133	-	84	40.408	Cebus_capucinus
ENSDARG00000009764	srek1	54	79.643	ENSCCAG00000020591	SREK1	85	82.353	Cebus_capucinus
ENSDARG00000009764	srek1	54	79.643	ENSCATG00000031482	SREK1	92	76.667	Cercocebus_atys
ENSDARG00000009764	srek1	54	46.595	ENSCATG00000043613	SRSF11	84	40.408	Cercocebus_atys
ENSDARG00000009764	srek1	54	46.595	ENSCSAG00000001375	SRSF11	84	40.408	Chlorocebus_sabaeus
ENSDARG00000009764	srek1	54	79.359	ENSCPBG00000026866	SREK1	84	79.359	Chrysemys_picta_bellii
ENSDARG00000009764	srek1	55	47.719	ENSCING00000022892	-	70	47.719	Ciona_intestinalis
ENSDARG00000009764	srek1	54	79.643	ENSCANG00000030421	SREK1	92	76.667	Colobus_angolensis_palliatus
ENSDARG00000009764	srek1	54	46.595	ENSCANG00000039796	SRSF11	84	40.408	Colobus_angolensis_palliatus
ENSDARG00000009764	srek1	54	77.739	ENSCGRG00001015222	-	70	78.125	Cricetulus_griseus_chok1gshd
ENSDARG00000009764	srek1	54	44.803	ENSCGRG00001012043	Srsf11	80	40.365	Cricetulus_griseus_chok1gshd
ENSDARG00000009764	srek1	54	77.739	ENSCGRG00000002130	-	70	78.125	Cricetulus_griseus_crigri
ENSDARG00000009764	srek1	55	42.349	ENSCSEG00000010721	-	94	34.972	Cynoglossus_semilaevis
ENSDARG00000009764	srek1	54	40.714	ENSCSEG00000008551	srsf11	89	36.759	Cynoglossus_semilaevis
ENSDARG00000009764	srek1	54	41.577	ENSCVAG00000010634	-	88	35.378	Cyprinodon_variegatus
ENSDARG00000009764	srek1	54	42.294	ENSCVAG00000006934	-	90	35.130	Cyprinodon_variegatus
ENSDARG00000009764	srek1	54	46.237	ENSDNOG00000008603	SRSF11	84	40.000	Dasypus_novemcinctus
ENSDARG00000009764	srek1	54	46.237	ENSDORG00000000669	Srsf11	84	40.408	Dipodomys_ordii
ENSDARG00000009764	srek1	55	38.947	FBgn0024285	Srp54	53	38.947	Drosophila_melanogaster
ENSDARG00000009764	srek1	54	46.403	ENSEASG00005007847	SRSF11	78	67.416	Equus_asinus_asinus
ENSDARG00000009764	srek1	54	44.128	ENSELUG00000021268	-	88	37.649	Esox_lucius
ENSDARG00000009764	srek1	97	65.589	ENSELUG00000008230	srek1	97	66.414	Esox_lucius
ENSDARG00000009764	srek1	54	43.214	ENSELUG00000023887	srsf11	83	37.267	Esox_lucius
ENSDARG00000009764	srek1	54	39.427	ENSFHEG00000013348	-	91	35.728	Fundulus_heteroclitus
ENSDARG00000009764	srek1	54	41.219	ENSGMOG00000002255	-	85	37.553	Gadus_morhua
ENSDARG00000009764	srek1	54	44.086	ENSGALG00000011305	SRSF11	75	37.959	Gallus_gallus
ENSDARG00000009764	srek1	60	38.312	ENSGAFG00000021415	SRSF11	77	36.667	Gambusia_affinis
ENSDARG00000009764	srek1	55	41.844	ENSGACG00000009346	srsf11	91	35.318	Gasterosteus_aculeatus
ENSDARG00000009764	srek1	54	40.647	ENSGACG00000017855	-	91	34.517	Gasterosteus_aculeatus
ENSDARG00000009764	srek1	73	64.767	ENSGAGG00000006087	SREK1	65	84.706	Gopherus_agassizii
ENSDARG00000009764	srek1	54	46.595	ENSGGOG00000005774	SRSF11	84	40.408	Gorilla_gorilla
ENSDARG00000009764	srek1	54	79.643	ENSGGOG00000004737	SREK1	92	76.667	Gorilla_gorilla
ENSDARG00000009764	srek1	54	46.237	ENSHGLG00000008682	SRSF11	85	40.000	Heterocephalus_glaber_female
ENSDARG00000009764	srek1	55	45.745	ENSHGLG00100018382	SRSF11	88	40.083	Heterocephalus_glaber_male
ENSDARG00000009764	srek1	55	42.553	ENSHCOG00000019035	-	87	38.934	Hippocampus_comes
ENSDARG00000009764	srek1	54	39.785	ENSIPUG00000010929	-	90	35.317	Ictalurus_punctatus
ENSDARG00000009764	srek1	99	66.219	ENSIPUG00000016851	srek1	99	68.714	Ictalurus_punctatus
ENSDARG00000009764	srek1	54	79.152	ENSSTOG00000008850	SREK1	85	82.353	Ictidomys_tridecemlineatus
ENSDARG00000009764	srek1	54	46.237	ENSSTOG00000008675	SRSF11	84	40.204	Ictidomys_tridecemlineatus
ENSDARG00000009764	srek1	54	46.237	ENSJJAG00000017238	Srsf11	88	40.524	Jaculus_jaculus
ENSDARG00000009764	srek1	54	40.569	ENSKMAG00000009775	srsf11	89	34.394	Kryptolebias_marmoratus
ENSDARG00000009764	srek1	54	41.429	ENSLBEG00000024167	srsf11	84	65.854	Labrus_bergylta
ENSDARG00000009764	srek1	54	44.803	ENSLACG00000006575	SRSF11	89	37.675	Latimeria_chalumnae
ENSDARG00000009764	srek1	55	83.039	ENSLOCG00000010547	srek1	72	82.746	Lepisosteus_oculatus
ENSDARG00000009764	srek1	54	45.324	ENSLOCG00000009617	srsf11	90	37.403	Lepisosteus_oculatus
ENSDARG00000009764	srek1	54	46.429	ENSLAFG00000015882	SRSF11	85	39.308	Loxodonta_africana
ENSDARG00000009764	srek1	54	78.799	ENSLAFG00000013853	SREK1	88	50.258	Loxodonta_africana
ENSDARG00000009764	srek1	54	46.595	ENSMFAG00000043405	SRSF11	84	40.408	Macaca_fascicularis
ENSDARG00000009764	srek1	54	79.643	ENSMFAG00000039823	SREK1	92	76.667	Macaca_fascicularis
ENSDARG00000009764	srek1	54	46.595	ENSMMUG00000013852	SRSF11	86	40.568	Macaca_mulatta
ENSDARG00000009764	srek1	54	79.643	ENSMMUG00000014586	SREK1	79	82.558	Macaca_mulatta
ENSDARG00000009764	srek1	54	79.643	ENSMNEG00000030723	SREK1	92	76.667	Macaca_nemestrina
ENSDARG00000009764	srek1	54	46.595	ENSMNEG00000029428	SRSF11	84	40.408	Macaca_nemestrina
ENSDARG00000009764	srek1	54	79.643	ENSMLEG00000039078	SREK1	92	76.667	Mandrillus_leucophaeus
ENSDARG00000009764	srek1	54	46.595	ENSMLEG00000041592	SRSF11	84	40.408	Mandrillus_leucophaeus
ENSDARG00000009764	srek1	54	42.652	ENSMAMG00000015002	-	92	60.396	Mastacembelus_armatus
ENSDARG00000009764	srek1	54	42.705	ENSMAMG00000000369	srsf11	88	37.952	Mastacembelus_armatus
ENSDARG00000009764	srek1	54	44.803	ENSMAUG00000008832	Srsf11	83	41.118	Mesocricetus_auratus
ENSDARG00000009764	srek1	54	77.385	ENSMAUG00000010066	-	70	77.778	Mesocricetus_auratus
ENSDARG00000009764	srek1	54	79.643	ENSMICG00000034959	SREK1	92	76.667	Microcebus_murinus
ENSDARG00000009764	srek1	54	77.739	ENSMOCG00000001536	-	58	74.595	Microtus_ochrogaster
ENSDARG00000009764	srek1	54	44.803	ENSMOCG00000011388	Srsf11	80	40.365	Microtus_ochrogaster
ENSDARG00000009764	srek1	54	41.667	ENSMMOG00000016751	-	92	58.559	Mola_mola
ENSDARG00000009764	srek1	56	81.533	ENSMALG00000017086	srek1	98	86.207	Monopterus_albus
ENSDARG00000009764	srek1	55	41.696	ENSMALG00000020833	-	89	37.425	Monopterus_albus
ENSDARG00000009764	srek1	54	44.803	MGP_CAROLIEiJ_G0025767	Srsf11	86	69.767	Mus_caroli
ENSDARG00000009764	srek1	54	44.803	ENSMUSG00000055436	Srsf11	85	69.767	Mus_musculus
ENSDARG00000009764	srek1	54	44.803	MGP_PahariEiJ_G0027217	Srsf11	86	69.767	Mus_pahari
ENSDARG00000009764	srek1	54	44.803	MGP_SPRETEiJ_G0026719	Srsf11	86	69.767	Mus_spretus
ENSDARG00000009764	srek1	54	46.237	ENSMPUG00000000892	SRSF11	84	40.204	Mustela_putorius_furo
ENSDARG00000009764	srek1	54	46.237	ENSMLUG00000006203	-	84	40.365	Myotis_lucifugus
ENSDARG00000009764	srek1	54	46.595	ENSNGAG00000010637	Srsf11	80	40.244	Nannospalax_galili
ENSDARG00000009764	srek1	54	46.595	ENSNLEG00000009400	SRSF11	84	40.408	Nomascus_leucogenys
ENSDARG00000009764	srek1	54	79.643	ENSNLEG00000003827	SREK1	85	82.353	Nomascus_leucogenys
ENSDARG00000009764	srek1	54	79.286	ENSOPRG00000012111	SREK1	52	78.246	Ochotona_princeps
ENSDARG00000009764	srek1	54	46.237	ENSODEG00000006289	SRSF11	86	40.162	Octodon_degus
ENSDARG00000009764	srek1	89	65.208	ENSONIG00000011080	srek1	95	56.812	Oreochromis_niloticus
ENSDARG00000009764	srek1	54	44.803	ENSOANG00000015528	SRSF11	87	40.000	Ornithorhynchus_anatinus
ENSDARG00000009764	srek1	54	43.525	ENSORLG00000007753	srsf11	89	36.238	Oryzias_latipes
ENSDARG00000009764	srek1	54	43.525	ENSORLG00020016204	srsf11	90	36.686	Oryzias_latipes_hni
ENSDARG00000009764	srek1	54	42.294	ENSORLG00020009393	-	81	61.538	Oryzias_latipes_hni
ENSDARG00000009764	srek1	54	42.294	ENSORLG00015009374	-	81	61.538	Oryzias_latipes_hsok
ENSDARG00000009764	srek1	54	43.525	ENSORLG00015011944	srsf11	90	36.686	Oryzias_latipes_hsok
ENSDARG00000009764	srek1	54	41.577	ENSOMEG00000006172	-	94	35.271	Oryzias_melastigma
ENSDARG00000009764	srek1	54	43.728	ENSOMEG00000022450	srsf11	88	37.074	Oryzias_melastigma
ENSDARG00000009764	srek1	98	51.383	ENSOMEG00000015817	srek1	57	71.930	Oryzias_melastigma
ENSDARG00000009764	srek1	54	46.071	ENSOGAG00000003392	SRSF11	85	40.121	Otolemur_garnettii
ENSDARG00000009764	srek1	54	46.237	ENSOARG00000011887	SRSF11	85	40.204	Ovis_aries
ENSDARG00000009764	srek1	54	46.595	ENSPPAG00000036149	SRSF11	83	40.408	Pan_paniscus
ENSDARG00000009764	srek1	54	78.929	ENSPPRG00000024617	SREK1	85	80.000	Panthera_pardus
ENSDARG00000009764	srek1	54	46.237	ENSPPRG00000002720	SRSF11	84	40.204	Panthera_pardus
ENSDARG00000009764	srek1	54	78.929	ENSPTIG00000006608	SREK1	85	80.000	Panthera_tigris_altaica
ENSDARG00000009764	srek1	54	79.643	ENSPTRG00000016936	SREK1	92	76.667	Pan_troglodytes
ENSDARG00000009764	srek1	54	46.763	ENSPTRG00000000852	SRSF11	83	40.408	Pan_troglodytes
ENSDARG00000009764	srek1	54	79.643	ENSPANG00000008953	SREK1	92	76.667	Papio_anubis
ENSDARG00000009764	srek1	54	46.595	ENSPANG00000018677	SRSF11	84	40.408	Papio_anubis
ENSDARG00000009764	srek1	97	68.872	ENSPKIG00000025563	srek1	99	64.583	Paramormyrops_kingsleyae
ENSDARG00000009764	srek1	54	44.086	ENSPSIG00000005152	SRSF11	87	38.076	Pelodiscus_sinensis
ENSDARG00000009764	srek1	54	77.739	ENSPEMG00000024051	-	59	74.595	Peromyscus_maniculatus_bairdii
ENSDARG00000009764	srek1	54	44.803	ENSPEMG00000014288	Srsf11	83	39.920	Peromyscus_maniculatus_bairdii
ENSDARG00000009764	srek1	55	44.484	ENSPCIG00000002083	SRSF11	83	39.919	Phascolarctos_cinereus
ENSDARG00000009764	srek1	54	39.427	ENSPFOG00000014895	-	91	34.706	Poecilia_formosa
ENSDARG00000009764	srek1	54	40.143	ENSPLAG00000009484	-	68	58.491	Poecilia_latipinna
ENSDARG00000009764	srek1	54	39.427	ENSPMEG00000023453	-	68	58.491	Poecilia_mexicana
ENSDARG00000009764	srek1	54	39.427	ENSPREG00000009065	SRSF11	91	34.902	Poecilia_reticulata
ENSDARG00000009764	srek1	54	46.595	ENSPPYG00000001245	SRSF11	84	40.408	Pongo_abelii
ENSDARG00000009764	srek1	54	46.014	ENSPCOG00000025365	SRSF11	83	38.241	Propithecus_coquereli
ENSDARG00000009764	srek1	54	79.643	ENSPCOG00000026230	SREK1	92	76.667	Propithecus_coquereli
ENSDARG00000009764	srek1	54	42.652	ENSPVAG00000011918	SRSF11	84	37.959	Pteropus_vampyrus
ENSDARG00000009764	srek1	100	69.962	ENSPNAG00000004328	srek1	100	70.420	Pygocentrus_nattereri
ENSDARG00000009764	srek1	54	44.803	ENSRNOG00000029592	Srsf11	80	40.365	Rattus_norvegicus
ENSDARG00000009764	srek1	54	79.643	ENSRBIG00000033818	SREK1	85	82.353	Rhinopithecus_bieti
ENSDARG00000009764	srek1	54	46.595	ENSRBIG00000042971	SRSF11	78	62.376	Rhinopithecus_bieti
ENSDARG00000009764	srek1	54	79.643	ENSRROG00000017210	SREK1	92	76.667	Rhinopithecus_roxellana
ENSDARG00000009764	srek1	54	46.595	ENSRROG00000039667	SRSF11	84	40.408	Rhinopithecus_roxellana
ENSDARG00000009764	srek1	54	79.643	ENSSBOG00000031230	SREK1	92	76.667	Saimiri_boliviensis_boliviensis
ENSDARG00000009764	srek1	54	46.595	ENSSBOG00000033461	SRSF11	78	62.376	Saimiri_boliviensis_boliviensis
ENSDARG00000009764	srek1	54	44.803	ENSSHAG00000012111	SRSF11	89	40.081	Sarcophilus_harrisii
ENSDARG00000009764	srek1	97	63.495	ENSSFOG00015004995	srek1	95	68.350	Scleropages_formosus
ENSDARG00000009764	srek1	56	41.237	ENSSMAG00000019897	-	92	35.478	Scophthalmus_maximus
ENSDARG00000009764	srek1	98	58.627	ENSSMAG00000011808	srek1	59	82.927	Scophthalmus_maximus
ENSDARG00000009764	srek1	54	42.705	ENSSDUG00000004582	SRSF11	88	37.952	Seriola_dumerili
ENSDARG00000009764	srek1	54	41.786	ENSSDUG00000018738	-	91	37.205	Seriola_dumerili
ENSDARG00000009764	srek1	55	42.403	ENSSLDG00000012105	-	92	58.559	Seriola_lalandi_dorsalis
ENSDARG00000009764	srek1	54	79.211	ENSSPUG00000016553	SREK1	89	79.211	Sphenodon_punctatus
ENSDARG00000009764	srek1	55	45.263	ENSSPUG00000016145	SRSF11	93	37.795	Sphenodon_punctatus
ENSDARG00000009764	srek1	54	41.577	ENSSPAG00000016483	-	66	65.854	Stegastes_partitus
ENSDARG00000009764	srek1	54	42.705	ENSSPAG00000005684	srsf11	89	35.417	Stegastes_partitus
ENSDARG00000009764	srek1	54	41.637	ENSTRUG00000017369	srsf11	81	37.214	Takifugu_rubripes
ENSDARG00000009764	srek1	79	66.585	ENSTNIG00000013463	srek1	69	82.206	Tetraodon_nigroviridis
ENSDARG00000009764	srek1	54	41.219	ENSTNIG00000008514	-	89	34.908	Tetraodon_nigroviridis
ENSDARG00000009764	srek1	55	41.489	ENSTNIG00000010494	srsf11	89	36.122	Tetraodon_nigroviridis
ENSDARG00000009764	srek1	54	46.595	ENSUMAG00000006618	SRSF11	87	40.552	Ursus_maritimus
ENSDARG00000009764	srek1	55	75.570	ENSXETG00000021460	srek1	99	59.155	Xenopus_tropicalis
ENSDARG00000009764	srek1	54	39.427	ENSXMAG00000019180	SRSF11	91	34.902	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component