EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000009830 (Gene tree)
Gene ID
794178
Gene Symbol
hdlbpa
Alias
HBP|cb591|cb811|hdlbp|wu:fb36d01|wu:fb94h08|wu:fc23d06|wu:fc75h07
Full Name
high density lipoprotein binding protein a
Gene Type
protein_coding
Species
Danio_rerio
Status
confidence
Strand
Minus strand
Length
20912 bases
Position
chr6:26874839-26895750
Accession
ZDB-GENE-030131-2032
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000017412KH_1PF00013.292.1e-183114
ENSDARP00000017412KH_1PF00013.292.1e-183214
ENSDARP00000017412KH_1PF00013.292.1e-183314
ENSDARP00000017412KH_1PF00013.292.1e-183414
ENSDARP00000017412KH_1PF00013.292.1e-183514
ENSDARP00000017412KH_1PF00013.292.1e-183614
ENSDARP00000017412KH_1PF00013.292.1e-183714
ENSDARP00000017412KH_1PF00013.292.1e-183814
ENSDARP00000017412KH_1PF00013.292.1e-183914
ENSDARP00000017412KH_1PF00013.292.1e-1831014
ENSDARP00000017412KH_1PF00013.292.1e-1831114
ENSDARP00000017412KH_1PF00013.292.1e-1831214
ENSDARP00000017412KH_1PF00013.292.1e-1831314
ENSDARP00000017412KH_1PF00013.292.1e-1831414
ENSDARP00000117710KH_1PF00013.297.1e-5414
ENSDARP00000117710KH_1PF00013.297.1e-5424
ENSDARP00000117710KH_1PF00013.297.1e-5434
ENSDARP00000117710KH_1PF00013.297.1e-5444
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
28381614Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transitionpreZGA & embryo2017 Apr 5Despic VDOI: 10.1101/gr.215954.116
28381614Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transitionZGA & embryo2017 Apr 5Despic VDOI: 10.1101/gr.215954.116
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000133439-823--- (aa)--
ENSDART00000011863-5109XM_005165938ENSDARP000000174121272 (aa)XP_005165995F1R9Y8
ENSDART00000134259-1495-ENSDARP00000117710433 (aa)-E9QDS1
Gene Model
Click here to download ENSDARG00000009830's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000009830's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000009830hdlbpa10072.447ENSDARG00000061864hdlbpb9969.725
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000009830hdlbpa10079.954ENSG00000115677HDLBP9784.942Homo_sapiens
ENSDARG00000009830hdlbpa10090.125ENSAPOG00000012609hdlbpa10089.890Acanthochromis_polyacanthus
ENSDARG00000009830hdlbpa10079.954ENSAMEG00000016552HDLBP10078.812Ailuropoda_melanoleuca
ENSDARG00000009830hdlbpa10089.171ENSACIG00000006015hdlbpa10087.230Amphilophus_citrinellus
ENSDARG00000009830hdlbpa10090.092ENSAOCG00000000300hdlbpa10089.498Amphiprion_ocellaris
ENSDARG00000009830hdlbpa10090.092ENSAPEG00000000522hdlbpa10089.420Amphiprion_percula
ENSDARG00000009830hdlbpa10090.553ENSATEG00000009748hdlbpa10088.950Anabas_testudineus
ENSDARG00000009830hdlbpa10080.184ENSACAG00000001556HDLBP10079.359Anolis_carolinensis
ENSDARG00000009830hdlbpa10079.954ENSANAG00000020545HDLBP10078.655Aotus_nancymaae
ENSDARG00000009830hdlbpa10089.342ENSACLG00000025965hdlbpa10089.107Astatotilapia_calliptera
ENSDARG00000009830hdlbpa9393.057ENSAMXG00000004221hdlbpa10092.803Astyanax_mexicanus
ENSDARG00000009830hdlbpa10078.802ENSBTAG00000004315HDLBP10077.873Bos_taurus
ENSDARG00000009830hdlbpa10079.954ENSCJAG00000006152HDLBP10078.532Callithrix_jacchus
ENSDARG00000009830hdlbpa10079.724ENSCAFG00000012913HDLBP10080.068Canis_familiaris
ENSDARG00000009830hdlbpa10079.724ENSCAFG00020025089HDLBP10078.733Canis_lupus_dingo
ENSDARG00000009830hdlbpa10078.571ENSCHIG00000022364HDLBP10077.952Capra_hircus
ENSDARG00000009830hdlbpa10079.493ENSTSYG00000002379HDLBP10078.264Carlito_syrichta
ENSDARG00000009830hdlbpa10076.485ENSCAPG00000008584HDLBP10076.000Cavia_aperea
ENSDARG00000009830hdlbpa10079.724ENSCPOG00000006297HDLBP10078.762Cavia_porcellus
ENSDARG00000009830hdlbpa10079.954ENSCCAG00000023361-10078.812Cebus_capucinus
ENSDARG00000009830hdlbpa9155.894ENSCCAG00000037920-10055.894Cebus_capucinus
ENSDARG00000009830hdlbpa10079.954ENSCATG00000039363HDLBP10078.812Cercocebus_atys
ENSDARG00000009830hdlbpa10079.724ENSCLAG00000002365HDLBP10078.840Chinchilla_lanigera
ENSDARG00000009830hdlbpa10077.455ENSCSAG00000005781HDLBP10077.958Chlorocebus_sabaeus
ENSDARG00000009830hdlbpa9177.273ENSCHOG00000003882-9958.665Choloepus_hoffmanni
ENSDARG00000009830hdlbpa10081.797ENSCPBG00000002442HDLBP10078.890Chrysemys_picta_bellii
ENSDARG00000009830hdlbpa10079.954ENSCANG00000033571HDLBP10078.890Colobus_angolensis_palliatus
ENSDARG00000009830hdlbpa9043.187ENSCGRG000010105704921511C20Rik10043.187Cricetulus_griseus_chok1gshd
ENSDARG00000009830hdlbpa10079.954ENSCGRG00001006086Hdlbp10078.577Cricetulus_griseus_chok1gshd
ENSDARG00000009830hdlbpa10079.954ENSCGRG00000014444Hdlbp10078.577Cricetulus_griseus_crigri
ENSDARG00000009830hdlbpa9344.752ENSCGRG00000015720Gm3829345.161Cricetulus_griseus_crigri
ENSDARG00000009830hdlbpa10088.088ENSCSEG00000008853hdlbpa10087.618Cynoglossus_semilaevis
ENSDARG00000009830hdlbpa10089.171ENSCVAG00000017892hdlbpa10087.686Cyprinodon_variegatus
ENSDARG00000009830hdlbpa10079.263ENSDNOG00000006753HDLBP10076.654Dasypus_novemcinctus
ENSDARG00000009830hdlbpa9775.200ENSETEG00000005416-7975.200Echinops_telfairi
ENSDARG00000009830hdlbpa10079.493ENSEASG00005008249HDLBP10078.733Equus_asinus_asinus
ENSDARG00000009830hdlbpa10079.493ENSECAG00000012829HDLBP10078.733Equus_caballus
ENSDARG00000009830hdlbpa9654.394ENSECAG00000030885-9654.394Equus_caballus
ENSDARG00000009830hdlbpa9948.709ENSECAG00000028723-9649.142Equus_caballus
ENSDARG00000009830hdlbpa9069.217ENSEEUG00000014648HDLBP10069.217Erinaceus_europaeus
ENSDARG00000009830hdlbpa10088.479ENSELUG00000010700hdlbpa10086.960Esox_lucius
ENSDARG00000009830hdlbpa10079.724ENSFCAG00000010455HDLBP10078.890Felis_catus
ENSDARG00000009830hdlbpa10081.106ENSFALG00000003437HDLBP10081.704Ficedula_albicollis
ENSDARG00000009830hdlbpa10080.184ENSFDAG00000000456HDLBP10078.935Fukomys_damarensis
ENSDARG00000009830hdlbpa10088.249ENSFHEG00000004848hdlbpa10087.853Fundulus_heteroclitus
ENSDARG00000009830hdlbpa10086.016ENSGMOG00000009932hdlbpa10085.781Gadus_morhua
ENSDARG00000009830hdlbpa10080.876ENSGALG00000005823HDLBP10081.626Gallus_gallus
ENSDARG00000009830hdlbpa10088.249ENSGAFG00000016766hdlbpa9388.018Gambusia_affinis
ENSDARG00000009830hdlbpa10088.991ENSGACG00000004648hdlbpa10087.382Gasterosteus_aculeatus
ENSDARG00000009830hdlbpa10081.797ENSGAGG00000004256HDLBP10081.235Gopherus_agassizii
ENSDARG00000009830hdlbpa10079.954ENSGGOG00000004392HDLBP10078.812Gorilla_gorilla
ENSDARG00000009830hdlbpa10089.498ENSHBUG00000001136hdlbpa10089.263Haplochromis_burtoni
ENSDARG00000009830hdlbpa10079.493ENSHGLG00000004910HDLBP10078.230Heterocephalus_glaber_female
ENSDARG00000009830hdlbpa10079.493ENSHGLG00100013326HDLBP10078.230Heterocephalus_glaber_male
ENSDARG00000009830hdlbpa10087.598ENSHCOG00000014837hdlbpa10087.706Hippocampus_comes
ENSDARG00000009830hdlbpa10090.343ENSIPUG00000013088hdlbp10090.109Ictalurus_punctatus
ENSDARG00000009830hdlbpa8483.835ENSIPUG00000013177-9383.835Ictalurus_punctatus
ENSDARG00000009830hdlbpa10079.724ENSSTOG00000013331HDLBP10078.700Ictidomys_tridecemlineatus
ENSDARG00000009830hdlbpa9140.260ENSJJAG00000013712-9340.279Jaculus_jaculus
ENSDARG00000009830hdlbpa10080.184ENSJJAG00000003596Hdlbp10078.812Jaculus_jaculus
ENSDARG00000009830hdlbpa10088.166ENSKMAG00000007571hdlbpa10087.931Kryptolebias_marmoratus
ENSDARG00000009830hdlbpa10089.158ENSLBEG00000027461hdlbpa10088.924Labrus_bergylta
ENSDARG00000009830hdlbpa10083.373ENSLACG00000003592HDLBP10082.902Latimeria_chalumnae
ENSDARG00000009830hdlbpa10088.097ENSLOCG00000006278hdlbpa10087.862Lepisosteus_oculatus
ENSDARG00000009830hdlbpa10080.184ENSLAFG00000014826HDLBP10078.655Loxodonta_africana
ENSDARG00000009830hdlbpa10079.954ENSMFAG00000033641HDLBP10078.812Macaca_fascicularis
ENSDARG00000009830hdlbpa10079.954ENSMMUG00000004730HDLBP10078.778Macaca_mulatta
ENSDARG00000009830hdlbpa10079.954ENSMNEG00000024260HDLBP10078.812Macaca_nemestrina
ENSDARG00000009830hdlbpa10079.954ENSMLEG00000042734HDLBP10078.812Mandrillus_leucophaeus
ENSDARG00000009830hdlbpa10089.862ENSMAMG00000008611hdlbpa10089.028Mastacembelus_armatus
ENSDARG00000009830hdlbpa10089.342ENSMZEG00005009513hdlbpa10089.107Maylandia_zebra
ENSDARG00000009830hdlbpa10080.876ENSMGAG00000003686HDLBP10083.055Meleagris_gallopavo
ENSDARG00000009830hdlbpa10080.184ENSMAUG00000017743Hdlbp10079.046Mesocricetus_auratus
ENSDARG00000009830hdlbpa10079.724ENSMICG00000004569HDLBP10078.812Microcebus_murinus
ENSDARG00000009830hdlbpa10079.954ENSMOCG00000006679Hdlbp10079.124Microtus_ochrogaster
ENSDARG00000009830hdlbpa10089.401ENSMMOG00000006880hdlbpa9689.171Mola_mola
ENSDARG00000009830hdlbpa10080.690ENSMODG00000016033HDLBP10079.286Monodelphis_domestica
ENSDARG00000009830hdlbpa10089.631ENSMALG00000015095hdlbpa10088.567Monopterus_albus
ENSDARG00000009830hdlbpa8741.176MGP_CAROLIEiJ_G00333744921511C20Rik10041.176Mus_caroli
ENSDARG00000009830hdlbpa9344.054MGP_CAROLIEiJ_G0033373Gm3829344.285Mus_caroli
ENSDARG00000009830hdlbpa10079.954MGP_CAROLIEiJ_G0014456Hdlbp10078.968Mus_caroli
ENSDARG00000009830hdlbpa9542.751ENSMUSG00000062791Gm3829343.438Mus_musculus
ENSDARG00000009830hdlbpa10079.954ENSMUSG00000034088Hdlbp10078.968Mus_musculus
ENSDARG00000009830hdlbpa9140.756ENSMUSG000000498154921511C20Rik10040.756Mus_musculus
ENSDARG00000009830hdlbpa10079.954MGP_PahariEiJ_G0027692Hdlbp10078.968Mus_pahari
ENSDARG00000009830hdlbpa9343.504MGP_PahariEiJ_G0031913Gm3829343.814Mus_pahari
ENSDARG00000009830hdlbpa8840.546MGP_PahariEiJ_G00319144921511C20Rik10040.546Mus_pahari
ENSDARG00000009830hdlbpa8740.546MGP_SPRETEiJ_G00345394921511C20Rik10040.546Mus_spretus
ENSDARG00000009830hdlbpa9243.353MGP_SPRETEiJ_G0034538Gm3829343.353Mus_spretus
ENSDARG00000009830hdlbpa10079.954MGP_SPRETEiJ_G0015260Hdlbp10078.968Mus_spretus
ENSDARG00000009830hdlbpa10079.724ENSMPUG00000000163HDLBP10078.750Mustela_putorius_furo
ENSDARG00000009830hdlbpa10079.263ENSMLUG00000005628HDLBP10078.700Myotis_lucifugus
ENSDARG00000009830hdlbpa10079.954ENSNGAG00000014873Hdlbp10079.124Nannospalax_galili
ENSDARG00000009830hdlbpa9989.428ENSNBRG00000000051hdlbpa9989.189Neolamprologus_brichardi
ENSDARG00000009830hdlbpa10075.806ENSNLEG00000031018-9971.678Nomascus_leucogenys
ENSDARG00000009830hdlbpa10079.724ENSNLEG00000013818HDLBP10078.655Nomascus_leucogenys
ENSDARG00000009830hdlbpa9986.689ENSMEUG00000008427HDLBP8786.689Notamacropus_eugenii
ENSDARG00000009830hdlbpa9479.699ENSOPRG00000011965-9479.699Ochotona_princeps
ENSDARG00000009830hdlbpa10079.263ENSODEG00000012313-10078.292Octodon_degus
ENSDARG00000009830hdlbpa10077.189ENSODEG00000017391-10074.295Octodon_degus
ENSDARG00000009830hdlbpa10089.263ENSONIG00000019272hdlbpa10089.028Oreochromis_niloticus
ENSDARG00000009830hdlbpa6488.028ENSOANG00000021864-10088.028Ornithorhynchus_anatinus
ENSDARG00000009830hdlbpa9980.736ENSOANG00000011759-10080.501Ornithorhynchus_anatinus
ENSDARG00000009830hdlbpa10079.493ENSOCUG00000012667HDLBP10078.733Oryctolagus_cuniculus
ENSDARG00000009830hdlbpa10089.171ENSORLG00000002226hdlbpa10088.162Oryzias_latipes
ENSDARG00000009830hdlbpa10089.171ENSORLG00020007905hdlbpa10088.162Oryzias_latipes_hni
ENSDARG00000009830hdlbpa10089.171ENSORLG00015004126hdlbpa10088.162Oryzias_latipes_hsok
ENSDARG00000009830hdlbpa10089.862ENSOMEG00000000247hdlbpa10086.016Oryzias_melastigma
ENSDARG00000009830hdlbpa10079.493ENSOGAG00000000738HDLBP10078.108Otolemur_garnettii
ENSDARG00000009830hdlbpa10078.571ENSOARG00000017870HDLBP10076.109Ovis_aries
ENSDARG00000009830hdlbpa10079.724ENSPPAG00000023318HDLBP10078.655Pan_paniscus
ENSDARG00000009830hdlbpa10079.724ENSPPRG00000010215HDLBP10078.890Panthera_pardus
ENSDARG00000009830hdlbpa10079.724ENSPTIG00000009328HDLBP9779.302Panthera_tigris_altaica
ENSDARG00000009830hdlbpa10079.954ENSPTRG00000013121HDLBP10078.733Pan_troglodytes
ENSDARG00000009830hdlbpa10079.954ENSPANG00000011832HDLBP10078.812Papio_anubis
ENSDARG00000009830hdlbpa10087.549ENSPKIG00000002392hdlbpa10087.236Paramormyrops_kingsleyae
ENSDARG00000009830hdlbpa10081.567ENSPSIG00000010068HDLBP10081.529Pelodiscus_sinensis
ENSDARG00000009830hdlbpa10078.027ENSPMGG00000002102hdlbpa10077.758Periophthalmus_magnuspinnatus
ENSDARG00000009830hdlbpa10079.954ENSPEMG00000017704Hdlbp10079.046Peromyscus_maniculatus_bairdii
ENSDARG00000009830hdlbpa10080.876ENSPCIG00000015375HDLBP9480.602Phascolarctos_cinereus
ENSDARG00000009830hdlbpa10088.736ENSPFOG00000000236hdlbpa10088.088Poecilia_formosa
ENSDARG00000009830hdlbpa10088.940ENSPLAG00000006033hdlbpa10089.046Poecilia_latipinna
ENSDARG00000009830hdlbpa10088.710ENSPMEG00000006627hdlbpa10088.009Poecilia_mexicana
ENSDARG00000009830hdlbpa10087.558ENSPREG00000014450hdlbpa8487.327Poecilia_reticulata
ENSDARG00000009830hdlbpa10079.724ENSPPYG00000013351HDLBP10078.655Pongo_abelii
ENSDARG00000009830hdlbpa10079.724ENSPCAG00000011136HDLBP7973.315Procavia_capensis
ENSDARG00000009830hdlbpa9968.867ENSPCOG00000021622HDLBP10068.867Propithecus_coquereli
ENSDARG00000009830hdlbpa10079.032ENSPVAG00000000555HDLBP10077.917Pteropus_vampyrus
ENSDARG00000009830hdlbpa10089.420ENSPNYG00000020753hdlbpa10089.185Pundamilia_nyererei
ENSDARG00000009830hdlbpa10087.167ENSPNAG00000029610hdlbpa10086.698Pygocentrus_nattereri
ENSDARG00000009830hdlbpa8941.348ENSRNOG00000028847AABR07040251.110041.348Rattus_norvegicus
ENSDARG00000009830hdlbpa9141.417ENSRNOG00000042823RGD15612309341.417Rattus_norvegicus
ENSDARG00000009830hdlbpa9444.426ENSRNOG00000031294RGD15631049544.825Rattus_norvegicus
ENSDARG00000009830hdlbpa10079.954ENSRNOG00000031479Hdlbp10078.812Rattus_norvegicus
ENSDARG00000009830hdlbpa10079.954ENSRBIG00000041381HDLBP10078.812Rhinopithecus_bieti
ENSDARG00000009830hdlbpa10079.954ENSRROG00000034263HDLBP10078.812Rhinopithecus_roxellana
ENSDARG00000009830hdlbpa10079.954ENSSBOG00000029714-9977.657Saimiri_boliviensis_boliviensis
ENSDARG00000009830hdlbpa9170.207ENSSBOG00000033067-9670.000Saimiri_boliviensis_boliviensis
ENSDARG00000009830hdlbpa10081.106ENSSHAG00000012422HDLBP10080.141Sarcophilus_harrisii
ENSDARG00000009830hdlbpa10088.410ENSSFOG00015018627hdlbp10088.175Scleropages_formosus
ENSDARG00000009830hdlbpa10088.551ENSSMAG00000002382hdlbpa10088.318Scophthalmus_maximus
ENSDARG00000009830hdlbpa10090.553ENSSDUG00000022258hdlbpa10090.141Seriola_dumerili
ENSDARG00000009830hdlbpa10090.553ENSSLDG00000004437hdlbpa10090.063Seriola_lalandi_dorsalis
ENSDARG00000009830hdlbpa9468.760ENSSARG00000012639HDLBP9468.593Sorex_araneus
ENSDARG00000009830hdlbpa10079.954ENSSPUG00000009182HDLBP10079.515Sphenodon_punctatus
ENSDARG00000009830hdlbpa10090.092ENSSPAG00000009145hdlbpa10089.263Stegastes_partitus
ENSDARG00000009830hdlbpa10078.571ENSSSCG00000016379HDLBP10079.054Sus_scrofa
ENSDARG00000009830hdlbpa10081.106ENSTGUG00000006189HDLBP10082.945Taeniopygia_guttata
ENSDARG00000009830hdlbpa10087.558ENSTRUG00000012148hdlbpa10086.824Takifugu_rubripes
ENSDARG00000009830hdlbpa10088.249ENSTNIG00000004185hdlbpa10086.974Tetraodon_nigroviridis
ENSDARG00000009830hdlbpa8784.000ENSTBEG00000001860HDLBP8873.899Tupaia_belangeri
ENSDARG00000009830hdlbpa9979.690ENSTTRG00000015251HDLBP7779.174Tursiops_truncatus
ENSDARG00000009830hdlbpa10079.493ENSUAMG00000018383HDLBP10079.284Ursus_americanus
ENSDARG00000009830hdlbpa10079.493ENSUMAG00000010539HDLBP10078.733Ursus_maritimus
ENSDARG00000009830hdlbpa9157.143ENSVPAG00000003112HDLBP9357.143Vicugna_pacos
ENSDARG00000009830hdlbpa10079.724ENSVVUG00000022797HDLBP9979.880Vulpes_vulpes
ENSDARG00000009830hdlbpa10077.880ENSXETG00000012164hdlbp9977.856Xenopus_tropicalis
ENSDARG00000009830hdlbpa10087.667ENSXCOG00000005943hdlbpa10087.431Xiphophorus_couchianus
ENSDARG00000009830hdlbpa10087.734ENSXMAG00000003787hdlbpa10087.500Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0071391cellular response to estrogen stimulus18618001.IDAProcess

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