EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000010085 (Gene tree)
Gene ID: 373132
Gene Symbol: p4ha2
Alias: prolyl 4-hydroxylase A|zgc:91948
Full Name: procollagen-proline%2C 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase)%2C alpha polypeptide 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 33955 bases
Position: chr21:43097798-43131752
Accession: ZDB-GENE-030827-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143396	2OG-FeII_Oxy	PF03171.20	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000122352	-	1477	-	ENSDARP00000109880	408 (aa)	-	F1QCU6
ENSDART00000160845	-	1583	-	ENSDARP00000135715	514 (aa)	-	Q6DG45
ENSDART00000024137	-	1938	XM_005173894	ENSDARP00000027028	514 (aa)	XP_005173951	Q6DG45
ENSDART00000174463	-	1938	XM_005173892	ENSDARP00000143396	536 (aa)	XP_005173949	A0A286Y8C8

Gene Model

Click here to download ENSDARG00000010085's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00330	Arginine and proline metabolism	KEGG
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000010085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000010085	p4ha2	95	39.499	ENSDARG00000094609	si:ch73-68b22.2	99	39.499
ENSDARG00000010085	p4ha2	97	65.900	ENSDARG00000033537	p4ha1a	99	65.056
ENSDARG00000010085	p4ha2	99	39.665	ENSDARG00000017038	zgc:152670	99	49.057
ENSDARG00000010085	p4ha2	96	66.346	ENSDARG00000071082	p4ha1b	99	65.543

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000010085	p4ha2	99	71.241	ENSG00000072682	P4HA2	99	71.241	Homo_sapiens
ENSDARG00000010085	p4ha2	99	69.981	ENSAMEG00000017663	P4HA2	98	69.981	Ailuropoda_melanoleuca
ENSDARG00000010085	p4ha2	96	74.468	ENSACIG00000009196	p4ha2	99	74.468	Amphilophus_citrinellus
ENSDARG00000010085	p4ha2	92	83.910	ENSAOCG00000003785	p4ha2	95	83.910	Amphiprion_ocellaris
ENSDARG00000010085	p4ha2	100	82.682	ENSAPEG00000019437	p4ha2	100	82.682	Amphiprion_percula
ENSDARG00000010085	p4ha2	100	81.041	ENSATEG00000011722	p4ha2	99	81.041	Anabas_testudineus
ENSDARG00000010085	p4ha2	96	72.467	ENSAPLG00000003370	P4HA2	99	72.467	Anas_platyrhynchos
ENSDARG00000010085	p4ha2	99	69.818	ENSACAG00000012415	P4HA2	99	69.818	Anolis_carolinensis
ENSDARG00000010085	p4ha2	99	70.566	ENSANAG00000022840	P4HA2	99	71.132	Aotus_nancymaae
ENSDARG00000010085	p4ha2	100	79.533	ENSACLG00000012990	p4ha2	98	84.937	Astatotilapia_calliptera
ENSDARG00000010085	p4ha2	99	38.764	ENSAMXG00000036173	si:ch73-68b22.2	99	38.764	Astyanax_mexicanus
ENSDARG00000010085	p4ha2	99	71.429	ENSBTAG00000001116	P4HA2	99	71.429	Bos_taurus
ENSDARG00000010085	p4ha2	99	71.053	ENSCJAG00000012936	P4HA2	99	71.053	Callithrix_jacchus
ENSDARG00000010085	p4ha2	99	69.811	ENSCAFG00000000824	P4HA2	99	69.811	Canis_familiaris
ENSDARG00000010085	p4ha2	99	69.811	ENSCAFG00020014266	P4HA2	99	69.811	Canis_lupus_dingo
ENSDARG00000010085	p4ha2	99	71.429	ENSCHIG00000021007	P4HA2	98	71.429	Capra_hircus
ENSDARG00000010085	p4ha2	100	70.632	ENSTSYG00000003233	P4HA2	99	70.632	Carlito_syrichta
ENSDARG00000010085	p4ha2	99	67.669	ENSCAPG00000011398	P4HA2	99	67.669	Cavia_aperea
ENSDARG00000010085	p4ha2	99	70.489	ENSCPOG00000008411	P4HA2	99	70.489	Cavia_porcellus
ENSDARG00000010085	p4ha2	99	71.053	ENSCCAG00000030663	P4HA2	99	71.053	Cebus_capucinus
ENSDARG00000010085	p4ha2	99	71.241	ENSCATG00000037172	P4HA2	99	71.241	Cercocebus_atys
ENSDARG00000010085	p4ha2	99	70.566	ENSCLAG00000013749	P4HA2	99	70.566	Chinchilla_lanigera
ENSDARG00000010085	p4ha2	99	69.925	ENSCSAG00000013842	P4HA2	99	69.925	Chlorocebus_sabaeus
ENSDARG00000010085	p4ha2	99	62.360	ENSCHOG00000000025	P4HA2	99	62.360	Choloepus_hoffmanni
ENSDARG00000010085	p4ha2	99	73.171	ENSCPBG00000025117	P4HA2	99	73.171	Chrysemys_picta_bellii
ENSDARG00000010085	p4ha2	99	71.053	ENSCANG00000031458	P4HA2	99	71.053	Colobus_angolensis_palliatus
ENSDARG00000010085	p4ha2	99	71.053	ENSCGRG00001012916	P4ha2	99	71.053	Cricetulus_griseus_chok1gshd
ENSDARG00000010085	p4ha2	99	70.677	ENSCGRG00000008403	P4ha2	99	70.677	Cricetulus_griseus_crigri
ENSDARG00000010085	p4ha2	100	73.028	ENSCSEG00000013215	p4ha2	99	73.028	Cynoglossus_semilaevis
ENSDARG00000010085	p4ha2	99	81.921	ENSCVAG00000000703	p4ha2	99	81.921	Cyprinodon_variegatus
ENSDARG00000010085	p4ha2	99	70.810	ENSDORG00000013569	P4ha2	99	70.810	Dipodomys_ordii
ENSDARG00000010085	p4ha2	99	71.670	ENSEASG00005016292	P4HA2	99	71.670	Equus_asinus_asinus
ENSDARG00000010085	p4ha2	99	71.857	ENSECAG00000024817	P4HA2	99	71.857	Equus_caballus
ENSDARG00000010085	p4ha2	85	81.624	ENSEEUG00000013366	P4HA2	87	81.624	Erinaceus_europaeus
ENSDARG00000010085	p4ha2	99	82.109	ENSELUG00000021666	p4ha2	99	85.714	Esox_lucius
ENSDARG00000010085	p4ha2	99	71.617	ENSFCAG00000014013	P4HA2	99	71.617	Felis_catus
ENSDARG00000010085	p4ha2	99	70.000	ENSFDAG00000006739	P4HA2	99	70.000	Fukomys_damarensis
ENSDARG00000010085	p4ha2	99	75.000	ENSGMOG00000006035	p4ha2	99	75.000	Gadus_morhua
ENSDARG00000010085	p4ha2	99	72.180	ENSGALG00000006677	P4HA2	100	71.260	Gallus_gallus
ENSDARG00000010085	p4ha2	95	83.858	ENSGAFG00000005640	p4ha2	100	83.858	Gambusia_affinis
ENSDARG00000010085	p4ha2	99	74.495	ENSGACG00000020865	p4ha2	98	74.495	Gasterosteus_aculeatus
ENSDARG00000010085	p4ha2	99	71.429	ENSGGOG00000006366	P4HA2	99	71.429	Gorilla_gorilla
ENSDARG00000010085	p4ha2	100	82.495	ENSHBUG00000005250	p4ha2	99	82.495	Haplochromis_burtoni
ENSDARG00000010085	p4ha2	99	70.489	ENSHGLG00000013514	P4HA2	99	70.489	Heterocephalus_glaber_female
ENSDARG00000010085	p4ha2	99	70.489	ENSHGLG00100000246	P4HA2	99	70.489	Heterocephalus_glaber_male
ENSDARG00000010085	p4ha2	96	81.467	ENSHCOG00000017395	p4ha2	99	81.467	Hippocampus_comes
ENSDARG00000010085	p4ha2	99	81.835	ENSIPUG00000017927	p4ha2	99	81.835	Ictalurus_punctatus
ENSDARG00000010085	p4ha2	99	70.755	ENSSTOG00000007747	P4HA2	99	70.755	Ictidomys_tridecemlineatus
ENSDARG00000010085	p4ha2	99	70.566	ENSJJAG00000023004	P4ha2	99	70.566	Jaculus_jaculus
ENSDARG00000010085	p4ha2	97	83.044	ENSKMAG00000011787	p4ha2	97	83.044	Kryptolebias_marmoratus
ENSDARG00000010085	p4ha2	100	78.674	ENSLBEG00000016497	p4ha2	93	78.674	Labrus_bergylta
ENSDARG00000010085	p4ha2	99	74.860	ENSLACG00000010010	P4HA2	99	74.860	Latimeria_chalumnae
ENSDARG00000010085	p4ha2	100	71.695	ENSLOCG00000010375	P4HA2	100	71.695	Lepisosteus_oculatus
ENSDARG00000010085	p4ha2	99	70.225	ENSLAFG00000007412	P4HA2	99	70.225	Loxodonta_africana
ENSDARG00000010085	p4ha2	99	71.241	ENSMFAG00000040077	P4HA2	99	71.241	Macaca_fascicularis
ENSDARG00000010085	p4ha2	99	64.098	ENSMMUG00000010858	P4HA2	99	64.098	Macaca_mulatta
ENSDARG00000010085	p4ha2	99	71.241	ENSMNEG00000043295	P4HA2	99	71.241	Macaca_nemestrina
ENSDARG00000010085	p4ha2	99	71.241	ENSMLEG00000039335	P4HA2	99	71.241	Mandrillus_leucophaeus
ENSDARG00000010085	p4ha2	97	81.118	ENSMAMG00000021549	p4ha2	98	82.812	Mastacembelus_armatus
ENSDARG00000010085	p4ha2	100	81.937	ENSMZEG00005008207	p4ha2	99	81.937	Maylandia_zebra
ENSDARG00000010085	p4ha2	100	70.610	ENSMGAG00000008789	P4HA2	99	70.113	Meleagris_gallopavo
ENSDARG00000010085	p4ha2	99	65.977	ENSMAUG00000007802	P4ha2	99	65.977	Mesocricetus_auratus
ENSDARG00000010085	p4ha2	99	71.751	ENSMICG00000005666	P4HA2	99	71.751	Microcebus_murinus
ENSDARG00000010085	p4ha2	99	70.865	ENSMOCG00000010121	P4ha2	99	70.865	Microtus_ochrogaster
ENSDARG00000010085	p4ha2	97	80.925	ENSMMOG00000013676	p4ha2	96	80.925	Mola_mola
ENSDARG00000010085	p4ha2	99	66.542	ENSMODG00000014035	P4HA2	99	66.542	Monodelphis_domestica
ENSDARG00000010085	p4ha2	99	69.868	MGP_CAROLIEiJ_G0016353	P4ha2	99	69.868	Mus_caroli
ENSDARG00000010085	p4ha2	99	70.644	ENSMUSG00000018906	P4ha2	99	70.677	Mus_musculus
ENSDARG00000010085	p4ha2	99	70.810	MGP_PahariEiJ_G0017488	P4ha2	99	70.810	Mus_pahari
ENSDARG00000010085	p4ha2	99	70.677	MGP_SPRETEiJ_G0017195	P4ha2	99	70.677	Mus_spretus
ENSDARG00000010085	p4ha2	99	69.811	ENSMPUG00000010718	P4HA2	99	69.811	Mustela_putorius_furo
ENSDARG00000010085	p4ha2	99	71.536	ENSMLUG00000001634	P4HA2	99	71.536	Myotis_lucifugus
ENSDARG00000010085	p4ha2	99	70.377	ENSNGAG00000019060	P4ha2	99	70.377	Nannospalax_galili
ENSDARG00000010085	p4ha2	99	71.429	ENSNLEG00000012634	P4HA2	99	71.429	Nomascus_leucogenys
ENSDARG00000010085	p4ha2	75	88.000	ENSMEUG00000014251	-	76	88.000	Notamacropus_eugenii
ENSDARG00000010085	p4ha2	99	69.868	ENSOPRG00000011633	P4HA2	99	69.868	Ochotona_princeps
ENSDARG00000010085	p4ha2	99	65.725	ENSODEG00000009419	P4HA2	99	65.725	Octodon_degus
ENSDARG00000010085	p4ha2	97	82.274	ENSONIG00000008377	p4ha2	100	80.447	Oreochromis_niloticus
ENSDARG00000010085	p4ha2	99	82.176	ENSORLG00000019064	p4ha2	99	82.176	Oryzias_latipes
ENSDARG00000010085	p4ha2	99	82.143	ENSORLG00015005888	p4ha2	99	82.143	Oryzias_latipes_hsok
ENSDARG00000010085	p4ha2	100	81.716	ENSOMEG00000004357	p4ha2	100	81.716	Oryzias_melastigma
ENSDARG00000010085	p4ha2	99	71.107	ENSOARG00000015394	P4HA2	98	71.107	Ovis_aries
ENSDARG00000010085	p4ha2	99	71.429	ENSPPAG00000028815	P4HA2	99	71.429	Pan_paniscus
ENSDARG00000010085	p4ha2	99	71.429	ENSPPRG00000005209	P4HA2	99	71.429	Panthera_pardus
ENSDARG00000010085	p4ha2	99	71.617	ENSPTIG00000006055	P4HA2	99	71.617	Panthera_tigris_altaica
ENSDARG00000010085	p4ha2	99	71.429	ENSPTRG00000017213	P4HA2	99	71.429	Pan_troglodytes
ENSDARG00000010085	p4ha2	100	65.549	ENSPKIG00000001702	P4HA2	100	65.549	Paramormyrops_kingsleyae
ENSDARG00000010085	p4ha2	99	45.336	ENSPKIG00000003449	si:ch73-68b22.2	92	45.336	Paramormyrops_kingsleyae
ENSDARG00000010085	p4ha2	97	85.221	ENSPKIG00000003533	p4ha2	96	86.429	Paramormyrops_kingsleyae
ENSDARG00000010085	p4ha2	99	71.482	ENSPSIG00000012716	P4HA2	99	71.482	Pelodiscus_sinensis
ENSDARG00000010085	p4ha2	99	70.489	ENSPEMG00000004967	P4ha2	99	70.489	Peromyscus_maniculatus_bairdii
ENSDARG00000010085	p4ha2	99	72.608	ENSPCIG00000001023	P4HA2	99	72.608	Phascolarctos_cinereus
ENSDARG00000010085	p4ha2	99	82.176	ENSPFOG00000009942	p4ha2	99	82.176	Poecilia_formosa
ENSDARG00000010085	p4ha2	99	82.176	ENSPLAG00000003519	p4ha2	99	82.176	Poecilia_latipinna
ENSDARG00000010085	p4ha2	99	82.176	ENSPMEG00000002935	p4ha2	99	82.176	Poecilia_mexicana
ENSDARG00000010085	p4ha2	99	80.776	ENSPREG00000004360	p4ha2	98	83.366	Poecilia_reticulata
ENSDARG00000010085	p4ha2	99	69.925	ENSPPYG00000015755	P4HA2	99	69.925	Pongo_abelii
ENSDARG00000010085	p4ha2	99	71.053	ENSPCOG00000017003	P4HA2	99	71.053	Propithecus_coquereli
ENSDARG00000010085	p4ha2	100	84.515	ENSPNAG00000014592	p4ha2	100	84.515	Pygocentrus_nattereri
ENSDARG00000010085	p4ha2	99	71.053	ENSRNOG00000033663	P4ha2	99	71.053	Rattus_norvegicus
ENSDARG00000010085	p4ha2	99	71.429	ENSRBIG00000043030	P4HA2	99	71.429	Rhinopithecus_bieti
ENSDARG00000010085	p4ha2	99	71.429	ENSRROG00000041342	P4HA2	99	71.429	Rhinopithecus_roxellana
ENSDARG00000010085	p4ha2	99	69.549	ENSSBOG00000032486	P4HA2	99	69.549	Saimiri_boliviensis_boliviensis
ENSDARG00000010085	p4ha2	99	70.577	ENSSHAG00000002885	P4HA2	91	70.577	Sarcophilus_harrisii
ENSDARG00000010085	p4ha2	97	84.069	ENSSFOG00015001608	p4ha2	100	81.890	Scleropages_formosus
ENSDARG00000010085	p4ha2	99	81.238	ENSSMAG00000005843	p4ha2	99	81.051	Scophthalmus_maximus
ENSDARG00000010085	p4ha2	100	82.123	ENSSLDG00000008672	p4ha2	100	82.123	Seriola_lalandi_dorsalis
ENSDARG00000010085	p4ha2	95	71.233	ENSSPUG00000009999	P4HA2	99	71.233	Sphenodon_punctatus
ENSDARG00000010085	p4ha2	100	81.852	ENSSPAG00000012480	p4ha2	100	81.852	Stegastes_partitus
ENSDARG00000010085	p4ha2	99	70.998	ENSSSCG00000020915	P4HA2	99	70.998	Sus_scrofa
ENSDARG00000010085	p4ha2	96	72.361	ENSTGUG00000001347	P4HA2	99	72.361	Taeniopygia_guttata
ENSDARG00000010085	p4ha2	100	79.221	ENSTRUG00000000302	p4ha2	100	79.221	Takifugu_rubripes
ENSDARG00000010085	p4ha2	89	87.288	ENSTBEG00000010113	P4HA2	88	87.288	Tupaia_belangeri
ENSDARG00000010085	p4ha2	99	70.919	ENSTTRG00000002908	P4HA2	99	70.919	Tursiops_truncatus
ENSDARG00000010085	p4ha2	99	70.113	ENSUMAG00000018565	P4HA2	99	70.113	Ursus_maritimus
ENSDARG00000010085	p4ha2	99	69.623	ENSVVUG00000024626	P4HA2	99	69.623	Vulpes_vulpes
ENSDARG00000010085	p4ha2	97	69.466	ENSXETG00000006987	p4ha2	99	68.343	Xenopus_tropicalis
ENSDARG00000010085	p4ha2	97	83.044	ENSXMAG00000012283	p4ha2	97	83.044	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004656	procollagen-proline 4-dioxygenase activity	21873635.	IBA	Function
GO:0004656	procollagen-proline 4-dioxygenase activity	-	IEA	Function
GO:0005506	iron ion binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	-	IEA	Function
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	-	IEA	Function
GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	21873635.	IBA	Process
GO:0031418	L-ascorbic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051213	dioxygenase activity	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process