EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000010246 (Gene tree)
Gene ID: 321974
Gene Symbol: prmt1
Alias: PRMT1|fb39h07|hrmt1l2|wu:fb39h07|zf1|zgc:66201
Full Name: protein arginine methyltransferase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: confidence
Strand: Minus strand
Length: 6189 bases
Position: chr3:32356833-32363021
Accession: ZDB-GENE-030131-693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000039367	MTS	PF05175.14	0.00023	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	preZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000012630	-	2313	-	ENSDARP00000010384	348 (aa)	-	F1R3J9
ENSDART00000035545	-	749	-	ENSDARP00000039367	249 (aa)	-	F1QFJ1

Gene Model

Click here to download ENSDARG00000010246's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04068	FoxO signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000010246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000010246	prmt1	79	51.500	ENSDARG00000069706	prmt6	56	51.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000010246	prmt1	85	91.509	ENSG00000126457	PRMT1	100	96.250	Homo_sapiens
ENSDARG00000010246	prmt1	82	93.171	ENSACAG00000004864	PRMT1	55	93.171	Anolis_carolinensis
ENSDARG00000010246	prmt1	82	94.146	ENSANAG00000021704	PRMT1	59	92.718	Aotus_nancymaae
ENSDARG00000010246	prmt1	71	97.191	ENSAMXG00000010374	prmt1	56	97.191	Astyanax_mexicanus
ENSDARG00000010246	prmt1	85	91.509	ENSBTAG00000006646	PRMT1	60	94.146	Bos_taurus
ENSDARG00000010246	prmt1	85	91.943	ENSCJAG00000003670	PRMT1	60	94.146	Callithrix_jacchus
ENSDARG00000010246	prmt1	82	94.146	ENSCAFG00000003589	PRMT1	55	94.146	Canis_familiaris
ENSDARG00000010246	prmt1	85	91.943	ENSCAFG00020024443	PRMT1	61	91.943	Canis_lupus_dingo
ENSDARG00000010246	prmt1	85	91.509	ENSCHIG00000014997	PRMT1	59	94.146	Capra_hircus
ENSDARG00000010246	prmt1	85	91.943	ENSTSYG00000034577	PRMT1	61	91.943	Carlito_syrichta
ENSDARG00000010246	prmt1	82	94.146	ENSCAPG00000015596	-	57	94.146	Cavia_aperea
ENSDARG00000010246	prmt1	85	91.509	ENSCPOG00000019328	PRMT1	60	91.509	Cavia_porcellus
ENSDARG00000010246	prmt1	85	91.509	ENSCCAG00000036122	-	59	94.146	Cebus_capucinus
ENSDARG00000010246	prmt1	85	91.509	ENSCATG00000041012	PRMT1	59	95.833	Cercocebus_atys
ENSDARG00000010246	prmt1	85	91.509	ENSCLAG00000003806	PRMT1	60	91.509	Chinchilla_lanigera
ENSDARG00000010246	prmt1	69	95.376	ENSCSAG00000002474	-	57	95.376	Chlorocebus_sabaeus
ENSDARG00000010246	prmt1	82	94.118	ENSCPBG00000006644	PRMT1	63	91.981	Chrysemys_picta_bellii
ENSDARG00000010246	prmt1	85	91.038	ENSCANG00000034725	PRMT1	60	91.038	Colobus_angolensis_palliatus
ENSDARG00000010246	prmt1	84	92.381	ENSCGRG00001018188	Prmt1	59	92.381	Cricetulus_griseus_chok1gshd
ENSDARG00000010246	prmt1	84	92.381	ENSCGRG00000014747	Prmt1	83	97.872	Cricetulus_griseus_crigri
ENSDARG00000010246	prmt1	83	96.117	ENSCSEG00000011717	prmt1	58	96.117	Cynoglossus_semilaevis
ENSDARG00000010246	prmt1	85	91.509	ENSDORG00000014923	Prmt1	60	91.509	Dipodomys_ordii
ENSDARG00000010246	prmt1	85	91.943	ENSEASG00005005297	PRMT1	59	94.146	Equus_asinus_asinus
ENSDARG00000010246	prmt1	85	91.943	ENSECAG00000024076	PRMT1	65	91.943	Equus_caballus
ENSDARG00000010246	prmt1	85	91.509	ENSFCAG00000006081	PRMT1	59	95.833	Felis_catus
ENSDARG00000010246	prmt1	73	80.220	ENSFCAG00000031034	-	61	80.220	Felis_catus
ENSDARG00000010246	prmt1	85	91.038	ENSFDAG00000017624	-	60	91.038	Fukomys_damarensis
ENSDARG00000010246	prmt1	84	91.981	ENSGAGG00000006576	PRMT1	72	91.981	Gopherus_agassizii
ENSDARG00000010246	prmt1	85	91.509	ENSGGOG00000000503	PRMT1	59	95.833	Gorilla_gorilla
ENSDARG00000010246	prmt1	85	91.038	ENSHGLG00000006326	PRMT1	60	91.038	Heterocephalus_glaber_female
ENSDARG00000010246	prmt1	85	91.038	ENSHGLG00100008015	PRMT1	60	91.038	Heterocephalus_glaber_male
ENSDARG00000010246	prmt1	85	91.943	ENSSTOG00000025543	PRMT1	61	91.943	Ictidomys_tridecemlineatus
ENSDARG00000010246	prmt1	85	91.038	ENSJJAG00000018374	Prmt1	60	91.038	Jaculus_jaculus
ENSDARG00000010246	prmt1	85	91.038	ENSLAFG00000018053	PRMT1	60	91.038	Loxodonta_africana
ENSDARG00000010246	prmt1	85	91.509	ENSMFAG00000043429	PRMT1	60	94.146	Macaca_fascicularis
ENSDARG00000010246	prmt1	85	91.509	ENSMMUG00000003029	-	59	95.833	Macaca_mulatta
ENSDARG00000010246	prmt1	85	91.509	ENSMNEG00000007881	PRMT1	59	94.146	Macaca_nemestrina
ENSDARG00000010246	prmt1	85	91.509	ENSMLEG00000042235	PRMT1	59	94.146	Mandrillus_leucophaeus
ENSDARG00000010246	prmt1	84	91.509	ENSMAUG00000005917	Prmt1	61	91.509	Mesocricetus_auratus
ENSDARG00000010246	prmt1	88	89.091	ENSMICG00000030079	PRMT1	61	91.943	Microcebus_murinus
ENSDARG00000010246	prmt1	70	80.571	ENSMOCG00000019441	-	63	80.571	Microtus_ochrogaster
ENSDARG00000010246	prmt1	85	89.623	ENSMODG00000013595	PRMT1	60	89.623	Monodelphis_domestica
ENSDARG00000010246	prmt1	85	91.038	MGP_CAROLIEiJ_G0029687	-	60	91.038	Mus_caroli
ENSDARG00000010246	prmt1	82	93.659	MGP_CAROLIEiJ_G0029686	-	55	93.659	Mus_caroli
ENSDARG00000010246	prmt1	85	91.038	ENSMUSG00000109324	Prmt1	95	88.050	Mus_musculus
ENSDARG00000010246	prmt1	82	93.659	MGP_PahariEiJ_G0012911	-	55	93.659	Mus_pahari
ENSDARG00000010246	prmt1	85	91.038	MGP_PahariEiJ_G0012912	-	60	91.038	Mus_pahari
ENSDARG00000010246	prmt1	82	93.659	MGP_SPRETEiJ_G0030784	-	55	93.659	Mus_spretus
ENSDARG00000010246	prmt1	85	91.038	MGP_SPRETEiJ_G0030785	-	60	91.038	Mus_spretus
ENSDARG00000010246	prmt1	85	91.038	ENSMLUG00000017092	-	60	91.038	Myotis_lucifugus
ENSDARG00000010246	prmt1	70	94.857	ENSMLUG00000026704	-	57	94.857	Myotis_lucifugus
ENSDARG00000010246	prmt1	85	91.038	ENSNGAG00000018656	Prmt1	60	91.038	Nannospalax_galili
ENSDARG00000010246	prmt1	82	90.640	ENSNLEG00000005306	-	68	90.196	Nomascus_leucogenys
ENSDARG00000010246	prmt1	82	93.659	ENSOPRG00000002011	-	60	93.659	Ochotona_princeps
ENSDARG00000010246	prmt1	83	92.823	ENSODEG00000016694	-	58	92.823	Octodon_degus
ENSDARG00000010246	prmt1	61	94.118	ENSORLG00000017181	prmt1	54	94.118	Oryzias_latipes
ENSDARG00000010246	prmt1	61	94.118	ENSORLG00020018168	prmt1	54	94.118	Oryzias_latipes_hni
ENSDARG00000010246	prmt1	83	96.135	ENSOMEG00000012874	prmt1	59	96.354	Oryzias_melastigma
ENSDARG00000010246	prmt1	85	91.509	ENSOGAG00000011938	-	60	91.509	Otolemur_garnettii
ENSDARG00000010246	prmt1	77	95.833	ENSOARG00000013381	-	55	95.833	Ovis_aries
ENSDARG00000010246	prmt1	85	91.509	ENSPPAG00000034989	PRMT1	59	95.833	Pan_paniscus
ENSDARG00000010246	prmt1	85	91.509	ENSPPRG00000007371	PRMT1	59	95.833	Panthera_pardus
ENSDARG00000010246	prmt1	85	91.509	ENSPTIG00000019080	PRMT1	65	91.509	Panthera_tigris_altaica
ENSDARG00000010246	prmt1	85	91.509	ENSPTRG00000040282	PRMT1	59	95.833	Pan_troglodytes
ENSDARG00000010246	prmt1	83	94.203	ENSPKIG00000006428	PRMT1	59	94.203	Paramormyrops_kingsleyae
ENSDARG00000010246	prmt1	85	90.566	ENSPEMG00000014287	Prmt1	59	93.171	Peromyscus_maniculatus_bairdii
ENSDARG00000010246	prmt1	82	84.541	ENSPCIG00000007372	PRMT1	57	84.541	Phascolarctos_cinereus
ENSDARG00000010246	prmt1	88	89.091	ENSPCOG00000013819	-	61	91.943	Propithecus_coquereli
ENSDARG00000010246	prmt1	83	97.101	ENSPNAG00000018063	prmt1	59	97.101	Pygocentrus_nattereri
ENSDARG00000010246	prmt1	85	91.038	ENSRNOG00000026109	Prmt1	60	91.038	Rattus_norvegicus
ENSDARG00000010246	prmt1	85	90.566	ENSRNOG00000004090	LOC100361025	60	90.566	Rattus_norvegicus
ENSDARG00000010246	prmt1	85	91.509	ENSRBIG00000037391	PRMT1	59	95.833	Rhinopithecus_bieti
ENSDARG00000010246	prmt1	85	91.509	ENSRROG00000039426	PRMT1	60	94.146	Rhinopithecus_roxellana
ENSDARG00000010246	prmt1	85	91.943	ENSSBOG00000021030	PRMT1	59	94.146	Saimiri_boliviensis_boliviensis
ENSDARG00000010246	prmt1	83	92.233	ENSSFOG00015021136	prmt1	59	92.233	Scleropages_formosus
ENSDARG00000010246	prmt1	83	97.585	ENSSFOG00015005748	prmt1	59	97.585	Scleropages_formosus
ENSDARG00000010246	prmt1	85	91.509	ENSTTRG00000005537	-	60	91.509	Tursiops_truncatus
ENSDARG00000010246	prmt1	85	91.509	ENSUAMG00000007446	PRMT1	60	91.509	Ursus_americanus
ENSDARG00000010246	prmt1	85	91.943	ENSUMAG00000002599	PRMT1	75	91.943	Ursus_maritimus
ENSDARG00000010246	prmt1	85	91.943	ENSVVUG00000021435	PRMT1	60	94.146	Vulpes_vulpes
ENSDARG00000010246	prmt1	84	92.925	ENSXETG00000002877	prmt1	60	92.925	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0006479	protein methylation	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008469	histone-arginine N-methyltransferase activity	21873635.	IBA	Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	15475159.	ISS	Function
GO:0016273	arginine N-methyltransferase activity	21214862.	IDA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0019919	peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	21873635.	IBA	Process
GO:0032259	methylation	-	IEA	Process
GO:0034969	histone arginine methylation	21873635.	IBA	Process
GO:0035242	protein-arginine omega-N asymmetric methyltransferase activity	21873635.	IBA	Function
GO:0043985	histone H4-R3 methylation	21873635.	IBA	Process
GO:0043985	histone H4-R3 methylation	21214862.	IMP	Process
GO:0060027	convergent extension involved in gastrulation	21214862.	IMP	Process