EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000010267 (Gene tree)
Gene ID: 405829
Gene Symbol: dpydb
Alias: dpyd|zgc:77205
Full Name: dihydropyrimidine dehydrogenase b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 296715 bases
Position: chr2:19824190-20120904
Accession: ZDB-GENE-040426-2459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000090906	Dus	PF01207.17	2.8e-07	1	1
ENSDARP00000157388	Dus	PF01207.17	3e-07	1	1
ENSDARP00000108791	Dus	PF01207.17	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000124724	-	5381	-	ENSDARP00000108791	1022 (aa)	-	F1QUE6
ENSDART00000186002	-	5270	-	ENSDARP00000157388	985 (aa)	-	A0A2R8QU12
ENSDART00000100133	-	3275	-	ENSDARP00000090906	945 (aa)	-	F1QX36

Gene Model

Click here to download ENSDARG00000010267's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00240	Pyrimidine metabolism	KEGG
dre00410	beta-Alanine metabolism	KEGG
dre00770	Pantothenate and CoA biosynthesis	KEGG
dre00983	Drug metabolism - other enzymes	KEGG
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000010267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000010267	dpydb	74	80.170	ENSDARG00000086853	dpyda.3	100	80.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000010267	dpydb	100	77.004	ENSG00000188641	DPYD	100	76.390	Homo_sapiens
ENSDARG00000010267	dpydb	100	83.544	ENSAPOG00000009496	dpydb	99	83.691	Acanthochromis_polyacanthus
ENSDARG00000010267	dpydb	99	76.327	ENSAMEG00000016662	DPYD	99	75.662	Ailuropoda_melanoleuca
ENSDARG00000010267	dpydb	100	81.646	ENSACIG00000001318	dpydb	99	82.132	Amphilophus_citrinellus
ENSDARG00000010267	dpydb	100	84.177	ENSAOCG00000015840	dpydb	99	84.082	Amphiprion_ocellaris
ENSDARG00000010267	dpydb	100	83.861	ENSAPEG00000010459	dpydb	99	83.789	Amphiprion_percula
ENSDARG00000010267	dpydb	100	82.700	ENSATEG00000002731	dpydb	100	82.583	Anabas_testudineus
ENSDARG00000010267	dpydb	84	79.073	ENSAPLG00000012045	DPYD	100	79.073	Anas_platyrhynchos
ENSDARG00000010267	dpydb	100	77.263	ENSACAG00000005513	DPYD	100	76.534	Anolis_carolinensis
ENSDARG00000010267	dpydb	100	76.582	ENSANAG00000036723	DPYD	100	76.098	Aotus_nancymaae
ENSDARG00000010267	dpydb	100	80.802	ENSACLG00000001822	dpydb	100	81.095	Astatotilapia_calliptera
ENSDARG00000010267	dpydb	100	83.456	ENSAMXG00000000135	dpyda.3	100	83.333	Astyanax_mexicanus
ENSDARG00000010267	dpydb	99	76.899	ENSBTAG00000031358	DPYD	99	76.821	Bos_taurus
ENSDARG00000010267	dpydb	100	76.688	ENSCJAG00000018179	DPYD	100	76.293	Callithrix_jacchus
ENSDARG00000010267	dpydb	99	76.539	ENSCAFG00000020062	DPYD	96	76.008	Canis_familiaris
ENSDARG00000010267	dpydb	99	76.539	ENSCAFG00020011809	DPYD	99	75.761	Canis_lupus_dingo
ENSDARG00000010267	dpydb	100	77.532	ENSCHIG00000016223	DPYD	100	77.429	Capra_hircus
ENSDARG00000010267	dpydb	78	78.862	ENSTSYG00000003615	DPYD	94	76.031	Carlito_syrichta
ENSDARG00000010267	dpydb	100	77.110	ENSCPOG00000003769	DPYD	100	76.390	Cavia_porcellus
ENSDARG00000010267	dpydb	100	76.477	ENSCCAG00000003997	DPYD	99	76.220	Cebus_capucinus
ENSDARG00000010267	dpydb	100	77.004	ENSCATG00000033708	DPYD	100	76.390	Cercocebus_atys
ENSDARG00000010267	dpydb	100	76.371	ENSCLAG00000009825	DPYD	100	75.988	Chinchilla_lanigera
ENSDARG00000010267	dpydb	100	77.215	ENSCSAG00000001495	DPYD	100	76.585	Chlorocebus_sabaeus
ENSDARG00000010267	dpydb	61	77.625	ENSCPBG00000011421	-	89	77.625	Chrysemys_picta_bellii
ENSDARG00000010267	dpydb	99	70.855	ENSCING00000003770	-	99	70.813	Ciona_intestinalis
ENSDARG00000010267	dpydb	99	70.452	ENSCSAVG00000004040	-	100	70.029	Ciona_savignyi
ENSDARG00000010267	dpydb	100	77.215	ENSCANG00000042296	DPYD	100	76.683	Colobus_angolensis_palliatus
ENSDARG00000010267	dpydb	100	82.911	ENSCSEG00000017980	dpydb	100	82.681	Cynoglossus_semilaevis
ENSDARG00000010267	dpydb	99	83.227	ENSCVAG00000017559	dpydb	99	83.219	Cyprinodon_variegatus
ENSDARG00000010267	dpydb	74	76.312	ENSDNOG00000012556	DPYD	100	76.312	Dasypus_novemcinctus
ENSDARG00000010267	dpydb	100	75.341	ENSDORG00000007418	Dpyd	100	74.951	Dipodomys_ordii
ENSDARG00000010267	dpydb	99	65.437	FBgn0086450	su(r)	98	64.809	Drosophila_melanogaster
ENSDARG00000010267	dpydb	99	65.360	ENSEBUG00000015615	-	98	65.132	Eptatretus_burgeri
ENSDARG00000010267	dpydb	100	78.059	ENSEASG00005015723	DPYD	99	77.416	Equus_asinus_asinus
ENSDARG00000010267	dpydb	100	77.954	ENSECAG00000010881	DPYD	100	79.148	Equus_caballus
ENSDARG00000010267	dpydb	100	82.101	ENSELUG00000002581	dpyda.3	100	82.101	Esox_lucius
ENSDARG00000010267	dpydb	100	75.764	ENSFCAG00000039421	DPYD	100	75.146	Felis_catus
ENSDARG00000010267	dpydb	99	76.539	ENSFALG00000002389	DPYD	99	75.893	Ficedula_albicollis
ENSDARG00000010267	dpydb	100	76.582	ENSFDAG00000009322	DPYD	100	75.636	Fukomys_damarensis
ENSDARG00000010267	dpydb	100	82.545	ENSFHEG00000001338	dpydb	99	82.910	Fundulus_heteroclitus
ENSDARG00000010267	dpydb	99	81.576	ENSGMOG00000008152	dpydb	100	81.755	Gadus_morhua
ENSDARG00000010267	dpydb	100	77.077	ENSGALG00000005509	DPYD	100	76.996	Gallus_gallus
ENSDARG00000010267	dpydb	100	82.806	ENSGAFG00000006907	dpydb	99	83.056	Gambusia_affinis
ENSDARG00000010267	dpydb	100	83.228	ENSGACG00000014875	dpydb	99	83.366	Gasterosteus_aculeatus
ENSDARG00000010267	dpydb	86	78.032	ENSGAGG00000009437	DPYD	99	78.032	Gopherus_agassizii
ENSDARG00000010267	dpydb	100	76.371	ENSHGLG00100009197	DPYD	100	75.805	Heterocephalus_glaber_male
ENSDARG00000010267	dpydb	100	83.861	ENSHCOG00000015737	dpydb	100	84.051	Hippocampus_comes
ENSDARG00000010267	dpydb	100	83.431	ENSIPUG00000009281	dpyd	100	83.431	Ictalurus_punctatus
ENSDARG00000010267	dpydb	100	70.886	ENSSTOG00000008412	DPYD	100	70.732	Ictidomys_tridecemlineatus
ENSDARG00000010267	dpydb	78	74.124	ENSJJAG00000023195	Dpyd	97	73.989	Jaculus_jaculus
ENSDARG00000010267	dpydb	100	83.122	ENSKMAG00000009544	dpydb	99	83.268	Kryptolebias_marmoratus
ENSDARG00000010267	dpydb	99	83.469	ENSLBEG00000021005	dpydb	99	83.333	Labrus_bergylta
ENSDARG00000010267	dpydb	100	80.947	ENSLOCG00000008253	dpydb	100	80.331	Lepisosteus_oculatus
ENSDARG00000010267	dpydb	100	77.532	ENSLAFG00000001798	DPYD	100	76.976	Loxodonta_africana
ENSDARG00000010267	dpydb	100	77.110	ENSMFAG00000033409	DPYD	100	76.488	Macaca_fascicularis
ENSDARG00000010267	dpydb	100	77.110	ENSMMUG00000020726	DPYD	100	76.488	Macaca_mulatta
ENSDARG00000010267	dpydb	100	77.004	ENSMNEG00000028972	DPYD	100	76.390	Macaca_nemestrina
ENSDARG00000010267	dpydb	100	77.004	ENSMLEG00000031938	DPYD	100	76.390	Mandrillus_leucophaeus
ENSDARG00000010267	dpydb	100	80.380	ENSMAMG00000011621	dpydb	99	81.595	Mastacembelus_armatus
ENSDARG00000010267	dpydb	100	82.489	ENSMZEG00005010698	dpydb	100	82.779	Maylandia_zebra
ENSDARG00000010267	dpydb	84	76.161	ENSMGAG00000007264	DPYD	100	76.161	Meleagris_gallopavo
ENSDARG00000010267	dpydb	100	77.743	ENSMICG00000003295	DPYD	100	77.171	Microcebus_murinus
ENSDARG00000010267	dpydb	100	76.656	ENSMOCG00000019630	Dpyd	100	75.973	Microtus_ochrogaster
ENSDARG00000010267	dpydb	99	76.558	ENSMODG00000004065	DPYD	99	75.684	Monodelphis_domestica
ENSDARG00000010267	dpydb	100	81.013	ENSMALG00000004541	dpydb	100	81.018	Monopterus_albus
ENSDARG00000010267	dpydb	100	75.949	MGP_CAROLIEiJ_G0025580	Dpyd	100	75.317	Mus_caroli
ENSDARG00000010267	dpydb	100	75.949	ENSMUSG00000033308	Dpyd	100	75.317	Mus_musculus
ENSDARG00000010267	dpydb	100	75.844	MGP_PahariEiJ_G0027026	Dpyd	100	75.317	Mus_pahari
ENSDARG00000010267	dpydb	100	76.160	MGP_SPRETEiJ_G0026531	Dpyd	100	75.610	Mus_spretus
ENSDARG00000010267	dpydb	100	75.869	ENSMPUG00000003278	DPYD	100	75.341	Mustela_putorius_furo
ENSDARG00000010267	dpydb	68	74.422	ENSMLUG00000006629	-	99	74.259	Myotis_lucifugus
ENSDARG00000010267	dpydb	100	76.947	ENSNGAG00000010583	Dpyd	100	76.534	Nannospalax_galili
ENSDARG00000010267	dpydb	74	73.219	ENSNBRG00000001729	dpydb	100	73.362	Neolamprologus_brichardi
ENSDARG00000010267	dpydb	100	77.321	ENSNLEG00000011315	DPYD	100	76.683	Nomascus_leucogenys
ENSDARG00000010267	dpydb	68	81.481	ENSOPRG00000000478	-	69	81.481	Ochotona_princeps
ENSDARG00000010267	dpydb	100	77.532	ENSODEG00000006033	DPYD	100	76.976	Octodon_degus
ENSDARG00000010267	dpydb	99	83.573	ENSONIG00000016599	dpydb	100	85.345	Oreochromis_niloticus
ENSDARG00000010267	dpydb	100	77.684	ENSOCUG00000008610	DPYD	99	77.277	Oryctolagus_cuniculus
ENSDARG00000010267	dpydb	100	83.228	ENSORLG00000013626	dpydb	100	83.268	Oryzias_latipes
ENSDARG00000010267	dpydb	100	83.333	ENSORLG00020019867	dpydb	100	83.366	Oryzias_latipes_hni
ENSDARG00000010267	dpydb	100	83.228	ENSORLG00015020667	dpydb	100	83.268	Oryzias_latipes_hsok
ENSDARG00000010267	dpydb	100	82.806	ENSOMEG00000017058	dpydb	100	82.779	Oryzias_melastigma
ENSDARG00000010267	dpydb	100	77.848	ENSOGAG00000000167	DPYD	100	77.171	Otolemur_garnettii
ENSDARG00000010267	dpydb	100	77.637	ENSOARG00000017549	DPYD	100	77.073	Ovis_aries
ENSDARG00000010267	dpydb	100	77.110	ENSPPAG00000041846	DPYD	100	77.803	Pan_paniscus
ENSDARG00000010267	dpydb	100	75.869	ENSPPRG00000023415	DPYD	100	75.244	Panthera_pardus
ENSDARG00000010267	dpydb	100	77.110	ENSPTRG00000000990	DPYD	100	76.488	Pan_troglodytes
ENSDARG00000010267	dpydb	100	76.899	ENSPANG00000001230	DPYD	100	76.293	Papio_anubis
ENSDARG00000010267	dpydb	100	81.962	ENSPKIG00000008228	dpydb	99	81.605	Paramormyrops_kingsleyae
ENSDARG00000010267	dpydb	100	77.263	ENSPSIG00000007676	DPYD	100	77.182	Pelodiscus_sinensis
ENSDARG00000010267	dpydb	100	76.899	ENSPEMG00000012380	Dpyd	100	76.134	Peromyscus_maniculatus_bairdii
ENSDARG00000010267	dpydb	100	83.122	ENSPFOG00000005785	dpydb	99	83.448	Poecilia_formosa
ENSDARG00000010267	dpydb	100	83.122	ENSPLAG00000023274	dpydb	99	83.448	Poecilia_latipinna
ENSDARG00000010267	dpydb	100	83.122	ENSPMEG00000005703	dpydb	99	83.448	Poecilia_mexicana
ENSDARG00000010267	dpydb	99	83.039	ENSPREG00000014688	dpydb	99	83.039	Poecilia_reticulata
ENSDARG00000010267	dpydb	100	76.899	ENSPPYG00000001131	DPYD	100	76.293	Pongo_abelii
ENSDARG00000010267	dpydb	84	95.238	ENSPCAG00000000987	DPYD	83	95.238	Procavia_capensis
ENSDARG00000010267	dpydb	99	75.080	ENSPCOG00000003302	DPYD	100	75.080	Propithecus_coquereli
ENSDARG00000010267	dpydb	100	82.700	ENSPNYG00000012672	dpydb	100	82.975	Pundamilia_nyererei
ENSDARG00000010267	dpydb	100	81.871	ENSPNAG00000021996	dpyda.3	100	81.871	Pygocentrus_nattereri
ENSDARG00000010267	dpydb	100	73.207	ENSRNOG00000017105	Dpyd	99	76.430	Rattus_norvegicus
ENSDARG00000010267	dpydb	100	74.578	ENSRBIG00000035171	DPYD	99	74.308	Rhinopithecus_bieti
ENSDARG00000010267	dpydb	54	76.789	ENSRROG00000031813	-	100	76.789	Rhinopithecus_roxellana
ENSDARG00000010267	dpydb	99	76.241	ENSSBOG00000020116	DPYD	99	76.241	Saimiri_boliviensis_boliviensis
ENSDARG00000010267	dpydb	100	77.215	ENSSHAG00000016972	DPYD	100	76.293	Sarcophilus_harrisii
ENSDARG00000010267	dpydb	100	80.526	ENSSFOG00015008674	dpydb	99	80.493	Scleropages_formosus
ENSDARG00000010267	dpydb	100	82.700	ENSSMAG00000001180	dpydb	100	82.975	Scophthalmus_maximus
ENSDARG00000010267	dpydb	100	83.333	ENSSDUG00000013875	dpydb	100	83.464	Seriola_dumerili
ENSDARG00000010267	dpydb	93	78.809	ENSSARG00000010936	DPYD	92	78.809	Sorex_araneus
ENSDARG00000010267	dpydb	100	82.595	ENSSPAG00000006467	dpydb	100	82.934	Stegastes_partitus
ENSDARG00000010267	dpydb	100	77.004	ENSSSCG00000006878	DPYD	100	76.585	Sus_scrofa
ENSDARG00000010267	dpydb	97	76.227	ENSTGUG00000005495	DPYD	99	76.342	Taeniopygia_guttata
ENSDARG00000010267	dpydb	100	78.903	ENSTRUG00000003040	dpydb	100	78.963	Takifugu_rubripes
ENSDARG00000010267	dpydb	100	81.178	ENSTNIG00000005550	dpydb	99	80.994	Tetraodon_nigroviridis
ENSDARG00000010267	dpydb	99	73.511	ENSTTRG00000008953	DPYD	99	72.852	Tursiops_truncatus
ENSDARG00000010267	dpydb	100	75.975	ENSUMAG00000008909	DPYD	100	75.895	Ursus_maritimus
ENSDARG00000010267	dpydb	99	76.645	ENSVVUG00000021876	DPYD	99	78.864	Vulpes_vulpes
ENSDARG00000010267	dpydb	100	72.718	ENSXETG00000008600	DPYD	100	72.718	Xenopus_tropicalis
ENSDARG00000010267	dpydb	100	82.489	ENSXCOG00000008010	dpydb	99	82.860	Xiphophorus_couchianus
ENSDARG00000010267	dpydb	100	82.384	ENSXMAG00000018645	dpydb	99	82.762	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0002058	uracil binding	21873635.	IBA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0003954	NADH dehydrogenase activity	21873635.	IBA	Function
GO:0004159	dihydrouracil dehydrogenase (NAD+) activity	21873635.	IBA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006210	thymine catabolic process	21873635.	IBA	Process
GO:0006212	uracil catabolic process	21873635.	IBA	Process
GO:0006212	uracil catabolic process	-	ISS	Process
GO:0006214	thymidine catabolic process	-	ISS	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	-	IEA	Function
GO:0017113	dihydropyrimidine dehydrogenase (NADP+) activity	21873635.	IBA	Function
GO:0017113	dihydropyrimidine dehydrogenase (NADP+) activity	-	IEA	Function
GO:0017113	dihydropyrimidine dehydrogenase (NADP+) activity	-	ISS	Function
GO:0019483	beta-alanine biosynthetic process	-	IEA	Process
GO:0042803	protein homodimerization activity	21873635.	IBA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0050661	NADP binding	21873635.	IBA	Function
GO:0051536	iron-sulfur cluster binding	21873635.	IBA	Function
GO:0051536	iron-sulfur cluster binding	-	IEA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process