EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000010977 (Gene tree)
Gene ID: 100007678
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: RAB34%2C member RAS oncogene family b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9322 bases
Position: chr21:26062452-26071773
Accession: ZDB-GENE-091118-61
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115865	MMR_HSR1	PF01926.23	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144176	-	576	-	-	- (aa)	-	-
ENSDART00000004740	-	1062	XM_021469087	ENSDARP00000023635	166 (aa)	XP_021324762	E7FG87
ENSDART00000141382	-	1365	XM_001346037	ENSDARP00000115865	254 (aa)	XP_001346073	A0A2R9YJI0

Gene Model

Click here to download ENSDARG00000010977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000010977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000010977	rab34b	63	39.130	ENSDARG00000029663	rab1ab	73	38.000
ENSDARG00000010977	rab34b	80	33.981	ENSDARG00000041450	rab11a	88	32.308
ENSDARG00000010977	rab34b	99	47.710	ENSDARG00000014058	rab36	100	47.710
ENSDARG00000010977	rab34b	63	33.750	ENSDARG00000018602	rab5aa	68	33.557
ENSDARG00000010977	rab34b	70	34.078	ENSDARG00000004151	rab23	71	34.078
ENSDARG00000010977	rab34b	63	39.752	ENSDARG00000034522	rab6ba	72	39.490
ENSDARG00000010977	rab34b	80	35.468	ENSDARG00000037967	si:dkey-16l2.16	90	35.417
ENSDARG00000010977	rab34b	63	35.625	ENSDARG00000103934	megf8	84	34.228
ENSDARG00000010977	rab34b	63	34.375	ENSDARG00000015807	rab22a	74	32.215
ENSDARG00000010977	rab34b	80	35.644	ENSDARG00000058425	rab35b	90	34.555
ENSDARG00000010977	rab34b	63	39.752	ENSDARG00000052263	rab1aa	73	38.667
ENSDARG00000010977	rab34b	61	38.462	ENSDARG00000041878	rab11ba	69	36.552
ENSDARG00000010977	rab34b	63	37.736	ENSDARG00000090086	rab11bb	65	36.552
ENSDARG00000010977	rab34b	63	38.509	ENSDARG00000089428	rab12	62	37.333
ENSDARG00000010977	rab34b	80	35.814	ENSDARG00000014340	rab11al	88	34.314
ENSDARG00000010977	rab34b	63	39.375	ENSDARG00000034771	rab13	73	38.255
ENSDARG00000010977	rab34b	65	35.542	ENSDARG00000026484	rab15	72	34.839
ENSDARG00000010977	rab34b	65	39.157	ENSDARG00000036501	rab39bb	72	38.065
ENSDARG00000010977	rab34b	63	39.130	ENSDARG00000058044	rab1ba	75	38.000
ENSDARG00000010977	rab34b	69	35.227	ENSDARG00000020261	rab2a	76	33.333
ENSDARG00000010977	rab34b	63	34.783	ENSDARG00000058800	rab25a	69	33.108
ENSDARG00000010977	rab34b	63	41.615	ENSDARG00000033056	zgc:171927	90	34.536
ENSDARG00000010977	rab34b	70	37.288	ENSDARG00000037884	rab30	81	36.747
ENSDARG00000010977	rab34b	63	34.356	ENSDARG00000020497	rab7a	72	31.579
ENSDARG00000010977	rab34b	63	33.742	ENSDARG00000087243	zgc:100918	73	30.921
ENSDARG00000010977	rab34b	52	36.296	ENSDARG00000045027	rab9a	60	33.884
ENSDARG00000010977	rab34b	80	35.149	ENSDARG00000029885	rab41	86	35.938
ENSDARG00000010977	rab34b	51	33.588	ENSDARG00000102580	CU571310.1	57	33.058
ENSDARG00000010977	rab34b	80	31.068	ENSDARG00000034215	rab42a	80	33.714
ENSDARG00000010977	rab34b	79	35.122	ENSDARG00000026098	si:dkey-13a21.4	89	34.021
ENSDARG00000010977	rab34b	54	33.577	ENSDARG00000018107	rab3da	73	33.333
ENSDARG00000010977	rab34b	63	39.752	ENSDARG00000031343	rab6bb	71	40.000
ENSDARG00000010977	rab34b	75	32.292	ENSDARG00000007257	rab5ab	73	32.353
ENSDARG00000010977	rab34b	65	39.157	ENSDARG00000019312	rab39ba	72	38.065
ENSDARG00000010977	rab34b	63	33.742	ENSDARG00000021287	rab7b	74	30.921
ENSDARG00000010977	rab34b	73	37.634	ENSDARG00000103714	rab6a	80	37.714
ENSDARG00000010977	rab34b	99	66.923	ENSDARG00000045628	rab34a	100	68.880
ENSDARG00000010977	rab34b	66	38.235	ENSDARG00000074246	rab14	70	36.943
ENSDARG00000010977	rab34b	64	38.889	ENSDARG00000102078	CABZ01072548.1	75	37.748
ENSDARG00000010977	rab34b	80	33.654	ENSDARG00000103391	rab9b	91	31.472
ENSDARG00000010977	rab34b	66	38.235	ENSDARG00000035188	rab14l	70	36.943
ENSDARG00000010977	rab34b	63	38.125	ENSDARG00000056479	rab1bb	73	36.913
ENSDARG00000010977	rab34b	67	30.682	ENSDARG00000114797	rab3b	68	31.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000010977	rab34b	83	77.209	ENSAPOG00000019147	rab34b	96	70.352	Acanthochromis_polyacanthus
ENSDARG00000010977	rab34b	99	64.822	ENSACIG00000004859	rab34b	100	64.822	Amphilophus_citrinellus
ENSDARG00000010977	rab34b	91	76.068	ENSAOCG00000007106	rab34b	85	76.068	Amphiprion_ocellaris
ENSDARG00000010977	rab34b	85	76.606	ENSAPEG00000018607	rab34b	84	73.077	Amphiprion_percula
ENSDARG00000010977	rab34b	92	73.840	ENSATEG00000006851	rab34b	93	74.569	Anabas_testudineus
ENSDARG00000010977	rab34b	99	72.266	ENSACLG00000005733	rab34b	97	72.266	Astatotilapia_calliptera
ENSDARG00000010977	rab34b	99	78.516	ENSAMXG00000006018	rab34b	100	78.516	Astyanax_mexicanus
ENSDARG00000010977	rab34b	93	72.917	ENSCSEG00000018133	rab34b	95	72.917	Cynoglossus_semilaevis
ENSDARG00000010977	rab34b	99	74.031	ENSELUG00000005597	rab34b	100	74.031	Esox_lucius
ENSDARG00000010977	rab34b	98	72.727	ENSFHEG00000004532	rab34b	99	72.727	Fundulus_heteroclitus
ENSDARG00000010977	rab34b	81	70.874	ENSGMOG00000007140	rab34b	100	70.874	Gadus_morhua
ENSDARG00000010977	rab34b	98	72.835	ENSGACG00000020514	rab34b	99	72.835	Gasterosteus_aculeatus
ENSDARG00000010977	rab34b	99	77.165	ENSIPUG00000024531	rab34	99	77.165	Ictalurus_punctatus
ENSDARG00000010977	rab34b	98	76.892	ENSKMAG00000019341	rab34b	99	76.892	Kryptolebias_marmoratus
ENSDARG00000010977	rab34b	98	74.409	ENSLBEG00000027819	rab34b	99	74.409	Labrus_bergylta
ENSDARG00000010977	rab34b	98	72.047	ENSMAMG00000020214	rab34b	99	72.047	Mastacembelus_armatus
ENSDARG00000010977	rab34b	98	71.032	ENSMMOG00000010936	rab34b	86	71.032	Mola_mola
ENSDARG00000010977	rab34b	94	73.684	ENSMALG00000018499	rab34b	93	73.684	Monopterus_albus
ENSDARG00000010977	rab34b	98	73.518	ENSONIG00000005519	rab34b	99	73.518	Oreochromis_niloticus
ENSDARG00000010977	rab34b	98	72.619	ENSORLG00000003119	rab34b	92	72.619	Oryzias_latipes
ENSDARG00000010977	rab34b	98	72.619	ENSORLG00020016139	rab34b	92	72.619	Oryzias_latipes_hni
ENSDARG00000010977	rab34b	98	73.016	ENSORLG00015000584	rab34b	92	73.016	Oryzias_latipes_hsok
ENSDARG00000010977	rab34b	98	73.413	ENSOMEG00000010334	rab34b	96	74.153	Oryzias_melastigma
ENSDARG00000010977	rab34b	99	69.767	ENSPKIG00000013326	rab34b	100	69.767	Paramormyrops_kingsleyae
ENSDARG00000010977	rab34b	98	73.913	ENSPMGG00000021697	rab34b	100	73.047	Periophthalmus_magnuspinnatus
ENSDARG00000010977	rab34b	98	73.913	ENSPFOG00000011444	rab34b	99	73.913	Poecilia_formosa
ENSDARG00000010977	rab34b	98	73.913	ENSPLAG00000005074	rab34b	99	73.913	Poecilia_latipinna
ENSDARG00000010977	rab34b	98	73.913	ENSPMEG00000013297	rab34b	99	73.913	Poecilia_mexicana
ENSDARG00000010977	rab34b	98	73.518	ENSPREG00000009813	rab34b	99	73.518	Poecilia_reticulata
ENSDARG00000010977	rab34b	99	67.984	ENSPNYG00000017153	rab34b	99	79.775	Pundamilia_nyererei
ENSDARG00000010977	rab34b	92	79.498	ENSPNAG00000015040	rab34b	100	79.498	Pygocentrus_nattereri
ENSDARG00000010977	rab34b	99	69.112	ENSSFOG00015005188	rab34	100	69.112	Scleropages_formosus
ENSDARG00000010977	rab34b	91	76.496	ENSSMAG00000019926	rab34b	99	74.678	Scophthalmus_maximus
ENSDARG00000010977	rab34b	98	75.591	ENSSDUG00000016760	rab34b	79	75.591	Seriola_dumerili
ENSDARG00000010977	rab34b	72	79.144	ENSSLDG00000014812	rab34b	90	80.435	Seriola_lalandi_dorsalis
ENSDARG00000010977	rab34b	98	73.518	ENSSPAG00000002801	rab34b	99	73.518	Stegastes_partitus
ENSDARG00000010977	rab34b	94	73.029	ENSTRUG00000014481	rab34b	98	73.029	Takifugu_rubripes
ENSDARG00000010977	rab34b	98	70.472	ENSTNIG00000016158	rab34b	98	70.472	Tetraodon_nigroviridis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006897	endocytosis	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0090385	phagosome-lysosome fusion	21873635.	IBA	Process