EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000010978 (Gene tree)
Gene ID: 553298
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22356 bases
Position: chr11:31236001-31258356
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000111075	TRM	PF02005.16	1.3e-141	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000129393	-	2733	XM_009306155	ENSDARP00000111075	672 (aa)	XP_009304430	F1QGD9
ENSDART00000164845	-	847	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000010978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000010978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000010978	trmt1	85	66.609	ENSG00000104907	TRMT1	100	72.917	Homo_sapiens
ENSDARG00000010978	trmt1	85	65.577	ENSAMEG00000012598	TRMT1	85	65.577	Ailuropoda_melanoleuca
ENSDARG00000010978	trmt1	90	68.874	ENSACIG00000018680	trmt1	93	69.040	Amphilophus_citrinellus
ENSDARG00000010978	trmt1	94	75.039	ENSAOCG00000006781	trmt1	94	74.882	Amphiprion_ocellaris
ENSDARG00000010978	trmt1	94	75.039	ENSAPEG00000007712	trmt1	94	75.197	Amphiprion_percula
ENSDARG00000010978	trmt1	94	74.451	ENSATEG00000001872	trmt1	94	74.295	Anabas_testudineus
ENSDARG00000010978	trmt1	91	63.607	ENSACAG00000003825	TRMT1	99	63.607	Anolis_carolinensis
ENSDARG00000010978	trmt1	85	65.517	ENSANAG00000023016	TRMT1	92	65.345	Aotus_nancymaae
ENSDARG00000010978	trmt1	89	74.542	ENSACLG00000010073	trmt1	96	74.043	Astatotilapia_calliptera
ENSDARG00000010978	trmt1	93	79.904	ENSAMXG00000012026	trmt1	93	79.585	Astyanax_mexicanus
ENSDARG00000010978	trmt1	88	64.191	ENSBTAG00000019325	TRMT1	84	64.345	Bos_taurus
ENSDARG00000010978	trmt1	77	41.777	WBGene00006613	trm-1	93	41.210	Caenorhabditis_elegans
ENSDARG00000010978	trmt1	85	64.433	ENSCJAG00000004566	TRMT1	88	64.261	Callithrix_jacchus
ENSDARG00000010978	trmt1	85	65.921	ENSCAFG00000017070	TRMT1	90	65.921	Canis_familiaris
ENSDARG00000010978	trmt1	85	65.517	ENSCAFG00020005397	TRMT1	88	65.285	Canis_lupus_dingo
ENSDARG00000010978	trmt1	95	61.290	ENSCHIG00000013569	TRMT1	94	61.077	Capra_hircus
ENSDARG00000010978	trmt1	85	63.465	ENSTSYG00000003207	TRMT1	87	62.692	Carlito_syrichta
ENSDARG00000010978	trmt1	80	61.524	ENSCAPG00000003355	TRMT1	94	61.029	Cavia_aperea
ENSDARG00000010978	trmt1	85	63.793	ENSCPOG00000011754	TRMT1	87	63.311	Cavia_porcellus
ENSDARG00000010978	trmt1	85	64.655	ENSCCAG00000022263	TRMT1	92	64.310	Cebus_capucinus
ENSDARG00000010978	trmt1	69	55.319	ENSCATG00000038220	-	83	55.106	Cercocebus_atys
ENSDARG00000010978	trmt1	85	66.897	ENSCATG00000039850	TRMT1	86	66.724	Cercocebus_atys
ENSDARG00000010978	trmt1	85	65.976	ENSCLAG00000015295	TRMT1	89	63.621	Chinchilla_lanigera
ENSDARG00000010978	trmt1	71	69.087	ENSCSAG00000006500	TRMT1	89	68.880	Chlorocebus_sabaeus
ENSDARG00000010978	trmt1	89	64.696	ENSCPBG00000023866	TRMT1	90	64.696	Chrysemys_picta_bellii
ENSDARG00000010978	trmt1	82	48.115	ENSCING00000002884	-	97	47.018	Ciona_intestinalis
ENSDARG00000010978	trmt1	80	49.908	ENSCSAVG00000010927	-	100	48.288	Ciona_savignyi
ENSDARG00000010978	trmt1	85	53.184	ENSCANG00000040631	TRMT1	86	53.184	Colobus_angolensis_palliatus
ENSDARG00000010978	trmt1	82	52.688	ENSCANG00000031650	-	86	52.688	Colobus_angolensis_palliatus
ENSDARG00000010978	trmt1	85	64.522	ENSCGRG00001022594	Trmt1	87	65.052	Cricetulus_griseus_chok1gshd
ENSDARG00000010978	trmt1	85	64.522	ENSCGRG00000017732	Trmt1	86	65.052	Cricetulus_griseus_crigri
ENSDARG00000010978	trmt1	94	74.097	ENSCSEG00000001643	trmt1	93	75.261	Cynoglossus_semilaevis
ENSDARG00000010978	trmt1	93	75.199	ENSCVAG00000011886	trmt1	94	75.040	Cyprinodon_variegatus
ENSDARG00000010978	trmt1	78	45.336	ENSDNOG00000048240	-	89	45.336	Dasypus_novemcinctus
ENSDARG00000010978	trmt1	85	64.948	ENSDORG00000014298	Trmt1	86	64.615	Dipodomys_ordii
ENSDARG00000010978	trmt1	81	47.636	FBgn0032430	CG6388	91	47.273	Drosophila_melanogaster
ENSDARG00000010978	trmt1	77	49.046	ENSEBUG00000003449	trmt1	75	49.621	Eptatretus_burgeri
ENSDARG00000010978	trmt1	85	65.749	ENSEASG00005004050	TRMT1	90	65.749	Equus_asinus_asinus
ENSDARG00000010978	trmt1	85	65.921	ENSECAG00000016149	TRMT1	90	65.921	Equus_caballus
ENSDARG00000010978	trmt1	58	55.949	ENSEEUG00000014102	-	100	55.949	Erinaceus_europaeus
ENSDARG00000010978	trmt1	93	73.981	ENSELUG00000021659	trmt1	95	73.981	Esox_lucius
ENSDARG00000010978	trmt1	85	65.577	ENSFCAG00000000483	TRMT1	87	65.188	Felis_catus
ENSDARG00000010978	trmt1	85	64.888	ENSFDAG00000007386	TRMT1	87	64.888	Fukomys_damarensis
ENSDARG00000010978	trmt1	88	73.898	ENSFHEG00000012865	trmt1	96	73.898	Fundulus_heteroclitus
ENSDARG00000010978	trmt1	86	68.111	ENSGMOG00000006564	trmt1	99	68.458	Gadus_morhua
ENSDARG00000010978	trmt1	90	77.073	ENSGAFG00000011862	trmt1	94	78.089	Gambusia_affinis
ENSDARG00000010978	trmt1	86	73.057	ENSGACG00000000227	trmt1	92	73.230	Gasterosteus_aculeatus
ENSDARG00000010978	trmt1	90	64.448	ENSGAGG00000016432	TRMT1	90	64.123	Gopherus_agassizii
ENSDARG00000010978	trmt1	85	66.609	ENSGGOG00000014007	TRMT1	87	66.437	Gorilla_gorilla
ENSDARG00000010978	trmt1	83	67.800	ENSHBUG00000008821	trmt1	92	67.263	Haplochromis_burtoni
ENSDARG00000010978	trmt1	85	64.948	ENSHGLG00000015972	TRMT1	87	64.828	Heterocephalus_glaber_female
ENSDARG00000010978	trmt1	85	60.720	ENSHGLG00100018112	TRMT1	87	60.585	Heterocephalus_glaber_male
ENSDARG00000010978	trmt1	88	73.129	ENSHCOG00000009447	trmt1	90	73.129	Hippocampus_comes
ENSDARG00000010978	trmt1	94	73.561	ENSIPUG00000002899	trmt1	94	73.872	Ictalurus_punctatus
ENSDARG00000010978	trmt1	85	65.285	ENSSTOG00000012531	TRMT1	87	64.957	Ictidomys_tridecemlineatus
ENSDARG00000010978	trmt1	89	63.562	ENSJJAG00000017154	Trmt1	93	62.399	Jaculus_jaculus
ENSDARG00000010978	trmt1	94	74.408	ENSKMAG00000011809	trmt1	98	76.047	Kryptolebias_marmoratus
ENSDARG00000010978	trmt1	94	74.097	ENSLBEG00000012703	trmt1	94	73.750	Labrus_bergylta
ENSDARG00000010978	trmt1	86	59.655	ENSLACG00000014585	TRMT1	94	59.348	Latimeria_chalumnae
ENSDARG00000010978	trmt1	86	66.271	ENSLOCG00000006479	trmt1	98	68.158	Lepisosteus_oculatus
ENSDARG00000010978	trmt1	85	65.345	ENSLAFG00000014072	TRMT1	88	65.017	Loxodonta_africana
ENSDARG00000010978	trmt1	85	66.897	ENSMFAG00000033143	TRMT1	86	66.724	Macaca_fascicularis
ENSDARG00000010978	trmt1	85	62.306	ENSMMUG00000001167	TRMT1	87	62.478	Macaca_mulatta
ENSDARG00000010978	trmt1	85	66.897	ENSMNEG00000037867	TRMT1	86	66.724	Macaca_nemestrina
ENSDARG00000010978	trmt1	85	66.724	ENSMLEG00000016142	TRMT1	87	66.552	Mandrillus_leucophaeus
ENSDARG00000010978	trmt1	97	73.333	ENSMAMG00000004357	trmt1	97	73.333	Mastacembelus_armatus
ENSDARG00000010978	trmt1	89	75.042	ENSMZEG00005014510	trmt1	89	74.542	Maylandia_zebra
ENSDARG00000010978	trmt1	85	64.261	ENSMAUG00000011134	Trmt1	87	64.261	Mesocricetus_auratus
ENSDARG00000010978	trmt1	85	66.724	ENSMICG00000000793	TRMT1	86	66.724	Microcebus_murinus
ENSDARG00000010978	trmt1	85	64.767	ENSMOCG00000015895	Trmt1	86	64.828	Microtus_ochrogaster
ENSDARG00000010978	trmt1	91	74.267	ENSMMOG00000011097	trmt1	99	74.104	Mola_mola
ENSDARG00000010978	trmt1	86	66.609	ENSMODG00000011619	TRMT1	93	66.609	Monodelphis_domestica
ENSDARG00000010978	trmt1	89	63.934	MGP_CAROLIEiJ_G0031304	Trmt1	99	59.041	Mus_caroli
ENSDARG00000010978	trmt1	89	64.484	ENSMUSG00000001909	Trmt1	99	57.554	Mus_musculus
ENSDARG00000010978	trmt1	89	64.204	MGP_SPRETEiJ_G0032422	Trmt1	99	58.394	Mus_spretus
ENSDARG00000010978	trmt1	85	66.093	ENSMPUG00000004210	TRMT1	82	66.093	Mustela_putorius_furo
ENSDARG00000010978	trmt1	85	66.381	ENSMLUG00000012809	TRMT1	85	66.381	Myotis_lucifugus
ENSDARG00000010978	trmt1	85	64.777	ENSNGAG00000022486	Trmt1	86	64.777	Nannospalax_galili
ENSDARG00000010978	trmt1	76	78.235	ENSNBRG00000024376	trmt1	87	78.235	Neolamprologus_brichardi
ENSDARG00000010978	trmt1	68	65.563	ENSNLEG00000013019	-	83	65.232	Nomascus_leucogenys
ENSDARG00000010978	trmt1	88	64.824	ENSMEUG00000013756	TRMT1	99	64.824	Notamacropus_eugenii
ENSDARG00000010978	trmt1	69	68.537	ENSOPRG00000009471	-	73	68.537	Ochotona_princeps
ENSDARG00000010978	trmt1	85	65.060	ENSODEG00000010323	TRMT1	87	64.940	Octodon_degus
ENSDARG00000010978	trmt1	91	77.362	ENSONIG00000000400	trmt1	91	79.407	Oreochromis_niloticus
ENSDARG00000010978	trmt1	71	68.507	ENSOCUG00000021934	TRMT1	89	69.151	Oryctolagus_cuniculus
ENSDARG00000010978	trmt1	90	72.549	ENSORLG00000020074	trmt1	95	72.549	Oryzias_latipes
ENSDARG00000010978	trmt1	95	72.231	ENSORLG00020007561	trmt1	99	72.231	Oryzias_latipes_hni
ENSDARG00000010978	trmt1	90	75.748	ENSORLG00015006547	trmt1	91	75.748	Oryzias_latipes_hsok
ENSDARG00000010978	trmt1	90	75.748	ENSOMEG00000019343	trmt1	91	75.415	Oryzias_melastigma
ENSDARG00000010978	trmt1	85	65.345	ENSOGAG00000025576	TRMT1	90	65.345	Otolemur_garnettii
ENSDARG00000010978	trmt1	95	50.230	ENSOARG00000009397	TRMT1	88	49.772	Ovis_aries
ENSDARG00000010978	trmt1	85	56.873	ENSPPRG00000012117	TRMT1	87	58.291	Panthera_pardus
ENSDARG00000010978	trmt1	64	65.763	ENSPTIG00000008833	TRMT1	82	65.449	Panthera_tigris_altaica
ENSDARG00000010978	trmt1	85	66.609	ENSPTRG00000010557	TRMT1	87	66.437	Pan_troglodytes
ENSDARG00000010978	trmt1	83	49.827	ENSPTRG00000050421	-	89	49.141	Pan_troglodytes
ENSDARG00000010978	trmt1	69	54.906	ENSPANG00000034058	-	81	53.942	Papio_anubis
ENSDARG00000010978	trmt1	85	66.897	ENSPANG00000009247	TRMT1	87	66.724	Papio_anubis
ENSDARG00000010978	trmt1	100	69.666	ENSPKIG00000005309	trmt1	100	69.609	Paramormyrops_kingsleyae
ENSDARG00000010978	trmt1	87	54.424	ENSPSIG00000008762	TRMT1	86	54.257	Pelodiscus_sinensis
ENSDARG00000010978	trmt1	88	75.211	ENSPMGG00000019764	trmt1	93	75.211	Periophthalmus_magnuspinnatus
ENSDARG00000010978	trmt1	85	65.000	ENSPEMG00000016247	Trmt1	86	65.517	Peromyscus_maniculatus_bairdii
ENSDARG00000010978	trmt1	90	61.056	ENSPMAG00000004329	trmt1	93	60.526	Petromyzon_marinus
ENSDARG00000010978	trmt1	89	65.449	ENSPCIG00000019273	TRMT1	92	65.449	Phascolarctos_cinereus
ENSDARG00000010978	trmt1	91	77.833	ENSPFOG00000008527	trmt1	93	77.833	Poecilia_formosa
ENSDARG00000010978	trmt1	91	76.847	ENSPLAG00000018788	trmt1	93	79.422	Poecilia_latipinna
ENSDARG00000010978	trmt1	90	78.405	ENSPMEG00000013120	trmt1	92	78.405	Poecilia_mexicana
ENSDARG00000010978	trmt1	89	76.833	ENSPREG00000000211	trmt1	89	77.500	Poecilia_reticulata
ENSDARG00000010978	trmt1	85	66.437	ENSPPYG00000009622	TRMT1	87	66.265	Pongo_abelii
ENSDARG00000010978	trmt1	85	61.419	ENSPCAG00000003698	TRMT1	87	61.419	Procavia_capensis
ENSDARG00000010978	trmt1	85	66.552	ENSPCOG00000008653	TRMT1	87	66.379	Propithecus_coquereli
ENSDARG00000010978	trmt1	85	65.749	ENSPVAG00000015076	TRMT1	87	65.749	Pteropus_vampyrus
ENSDARG00000010978	trmt1	89	72.213	ENSPNYG00000013960	trmt1	96	71.714	Pundamilia_nyererei
ENSDARG00000010978	trmt1	87	84.156	ENSPNAG00000024859	trmt1	99	84.156	Pygocentrus_nattereri
ENSDARG00000010978	trmt1	89	63.934	ENSRNOG00000002914	Trmt1	94	63.844	Rattus_norvegicus
ENSDARG00000010978	trmt1	85	67.241	ENSRBIG00000038324	TRMT1	86	67.241	Rhinopithecus_bieti
ENSDARG00000010978	trmt1	82	50.356	ENSRBIG00000037505	-	87	50.178	Rhinopithecus_bieti
ENSDARG00000010978	trmt1	85	67.241	ENSRROG00000028599	TRMT1	86	67.241	Rhinopithecus_roxellana
ENSDARG00000010978	trmt1	82	49.644	ENSRROG00000031847	-	86	49.466	Rhinopithecus_roxellana
ENSDARG00000010978	trmt1	77	36.447	YDR120C	-	92	36.528	Saccharomyces_cerevisiae
ENSDARG00000010978	trmt1	85	64.310	ENSSBOG00000028861	TRMT1	92	64.138	Saimiri_boliviensis_boliviensis
ENSDARG00000010978	trmt1	85	67.647	ENSSHAG00000014381	TRMT1	96	65.833	Sarcophilus_harrisii
ENSDARG00000010978	trmt1	87	76.329	ENSSFOG00015004139	trmt1	85	75.685	Scleropages_formosus
ENSDARG00000010978	trmt1	97	70.633	ENSSMAG00000021136	trmt1	98	71.299	Scophthalmus_maximus
ENSDARG00000010978	trmt1	98	73.002	ENSSDUG00000012740	trmt1	97	72.700	Seriola_dumerili
ENSDARG00000010978	trmt1	98	72.851	ENSSLDG00000005971	trmt1	97	72.549	Seriola_lalandi_dorsalis
ENSDARG00000010978	trmt1	77	65.399	ENSSARG00000005138	TRMT1	91	65.326	Sorex_araneus
ENSDARG00000010978	trmt1	86	51.443	ENSSPUG00000001084	TRMT1	91	51.864	Sphenodon_punctatus
ENSDARG00000010978	trmt1	90	76.080	ENSSPAG00000007153	trmt1	99	75.537	Stegastes_partitus
ENSDARG00000010978	trmt1	85	66.609	ENSSSCG00000013744	TRMT1	90	66.437	Sus_scrofa
ENSDARG00000010978	trmt1	88	71.261	ENSTRUG00000010700	trmt1	89	71.261	Takifugu_rubripes
ENSDARG00000010978	trmt1	87	77.381	ENSTNIG00000018808	trmt1	99	77.381	Tetraodon_nigroviridis
ENSDARG00000010978	trmt1	85	63.511	ENSTTRG00000006379	TRMT1	87	63.511	Tursiops_truncatus
ENSDARG00000010978	trmt1	95	61.350	ENSUAMG00000022911	TRMT1	93	63.432	Ursus_americanus
ENSDARG00000010978	trmt1	85	65.404	ENSUMAG00000006027	TRMT1	90	65.404	Ursus_maritimus
ENSDARG00000010978	trmt1	85	66.093	ENSVVUG00000024177	TRMT1	86	66.093	Vulpes_vulpes
ENSDARG00000010978	trmt1	70	67.872	ENSXETG00000033863	TRMT1	92	67.872	Xenopus_tropicalis
ENSDARG00000010978	trmt1	90	76.911	ENSXCOG00000015733	trmt1	93	77.924	Xiphophorus_couchianus
ENSDARG00000010978	trmt1	87	77.665	ENSXMAG00000013823	trmt1	99	78.902	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002940	tRNA N2-guanine methylation	21873635.	IBA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	21873635.	IBA	Function
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function