EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000011079 (Gene tree)
Gene ID: 321058
Gene Symbol: wdr3
Alias: sb:cb42|wu:fb92b07
Full Name: WD repeat domain 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 18672 bases
Position: chr9:20853894-20872565
Accession: ZDB-GENE-030131-9830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000023281	Utp12	PF04003.12	4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000003648	-	3058	-	ENSDARP00000023281	938 (aa)	-	B0S6A9
ENSDART00000147892	-	401	-	ENSDARP00000116100	61 (aa)	-	B0S6A8
ENSDART00000131713	-	560	-	-	- (aa)	-	-
ENSDART00000142280	-	734	-	-	- (aa)	-	-
ENSDART00000145259	-	813	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000011079's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000011079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000011079	wdr3	50	33.065	ENSDARG00000016903	wdr5	95	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000011079	wdr3	100	71.459	ENSG00000065183	WDR3	100	71.308	Homo_sapiens
ENSDARG00000011079	wdr3	95	83.072	ENSAPOG00000005975	wdr3	99	81.818	Acanthochromis_polyacanthus
ENSDARG00000011079	wdr3	100	70.930	ENSAMEG00000004339	WDR3	100	70.719	Ailuropoda_melanoleuca
ENSDARG00000011079	wdr3	99	75.133	ENSACIG00000006993	wdr3	99	74.707	Amphilophus_citrinellus
ENSDARG00000011079	wdr3	99	80.659	ENSAOCG00000023966	wdr3	99	80.920	Amphiprion_ocellaris
ENSDARG00000011079	wdr3	99	81.722	ENSAPEG00000018223	wdr3	99	80.978	Amphiprion_percula
ENSDARG00000011079	wdr3	99	81.934	ENSATEG00000000703	wdr3	99	82.040	Anabas_testudineus
ENSDARG00000011079	wdr3	99	66.384	ENSACAG00000008210	WDR3	99	66.172	Anolis_carolinensis
ENSDARG00000011079	wdr3	100	71.459	ENSANAG00000033348	WDR3	100	71.308	Aotus_nancymaae
ENSDARG00000011079	wdr3	99	82.678	ENSACLG00000016975	wdr3	99	82.465	Astatotilapia_calliptera
ENSDARG00000011079	wdr3	100	86.702	ENSAMXG00000005755	wdr3	100	86.702	Astyanax_mexicanus
ENSDARG00000011079	wdr3	100	71.036	ENSBTAG00000019937	WDR3	100	70.719	Bos_taurus
ENSDARG00000011079	wdr3	99	34.974	WBGene00017435	F13H8.2	97	34.979	Caenorhabditis_elegans
ENSDARG00000011079	wdr3	100	71.353	ENSCJAG00000005749	WDR3	100	71.203	Callithrix_jacchus
ENSDARG00000011079	wdr3	100	70.930	ENSCAFG00000009916	WDR3	100	70.719	Canis_familiaris
ENSDARG00000011079	wdr3	81	71.429	ENSCAFG00020020610	WDR3	98	71.778	Canis_lupus_dingo
ENSDARG00000011079	wdr3	100	71.142	ENSCHIG00000010490	WDR3	100	70.719	Capra_hircus
ENSDARG00000011079	wdr3	100	71.414	ENSTSYG00000002158	WDR3	100	71.308	Carlito_syrichta
ENSDARG00000011079	wdr3	100	57.973	ENSCAPG00000015805	WDR3	100	57.279	Cavia_aperea
ENSDARG00000011079	wdr3	100	71.459	ENSCPOG00000011305	WDR3	100	71.036	Cavia_porcellus
ENSDARG00000011079	wdr3	100	71.429	ENSCCAG00000037237	WDR3	100	71.278	Cebus_capucinus
ENSDARG00000011079	wdr3	100	71.459	ENSCATG00000037200	WDR3	100	71.308	Cercocebus_atys
ENSDARG00000011079	wdr3	100	71.247	ENSCLAG00000010657	WDR3	100	71.097	Chinchilla_lanigera
ENSDARG00000011079	wdr3	100	71.247	ENSCSAG00000001705	WDR3	100	71.097	Chlorocebus_sabaeus
ENSDARG00000011079	wdr3	83	70.000	ENSCHOG00000006428	WDR3	83	70.000	Choloepus_hoffmanni
ENSDARG00000011079	wdr3	98	70.950	ENSCPBG00000001426	WDR3	98	71.382	Chrysemys_picta_bellii
ENSDARG00000011079	wdr3	100	70.445	ENSCGRG00001019544	Wdr3	100	70.127	Cricetulus_griseus_chok1gshd
ENSDARG00000011079	wdr3	87	68.130	ENSCGRG00000001027	Wdr3	91	66.829	Cricetulus_griseus_crigri
ENSDARG00000011079	wdr3	99	80.638	ENSCSEG00000009381	wdr3	100	80.021	Cynoglossus_semilaevis
ENSDARG00000011079	wdr3	99	77.742	ENSCVAG00000014846	wdr3	99	77.742	Cyprinodon_variegatus
ENSDARG00000011079	wdr3	100	70.613	ENSDNOG00000018114	WDR3	100	70.296	Dasypus_novemcinctus
ENSDARG00000011079	wdr3	100	70.335	ENSDORG00000011031	Wdr3	100	70.440	Dipodomys_ordii
ENSDARG00000011079	wdr3	98	43.226	FBgn0038597	CG8064	98	42.337	Drosophila_melanogaster
ENSDARG00000011079	wdr3	100	70.719	ENSEASG00005006393	WDR3	100	70.402	Equus_asinus_asinus
ENSDARG00000011079	wdr3	100	70.719	ENSECAG00000006575	WDR3	99	70.402	Equus_caballus
ENSDARG00000011079	wdr3	95	71.109	ENSEEUG00000002218	WDR3	100	71.221	Erinaceus_europaeus
ENSDARG00000011079	wdr3	100	81.316	ENSELUG00000005997	wdr3	100	81.529	Esox_lucius
ENSDARG00000011079	wdr3	100	70.930	ENSFCAG00000003469	WDR3	100	70.719	Felis_catus
ENSDARG00000011079	wdr3	98	68.472	ENSFALG00000005089	WDR3	98	68.251	Ficedula_albicollis
ENSDARG00000011079	wdr3	100	71.353	ENSFDAG00000016284	WDR3	100	71.036	Fukomys_damarensis
ENSDARG00000011079	wdr3	99	80.255	ENSFHEG00000012138	wdr3	99	77.588	Fundulus_heteroclitus
ENSDARG00000011079	wdr3	95	73.271	ENSGMOG00000002962	wdr3	100	72.948	Gadus_morhua
ENSDARG00000011079	wdr3	99	69.639	ENSGALG00000014791	WDR3	99	70.276	Gallus_gallus
ENSDARG00000011079	wdr3	99	80.594	ENSGAFG00000013102	wdr3	99	80.064	Gambusia_affinis
ENSDARG00000011079	wdr3	74	72.007	ENSGACG00000008251	wdr3	100	70.826	Gasterosteus_aculeatus
ENSDARG00000011079	wdr3	95	71.076	ENSGAGG00000009171	WDR3	96	70.852	Gopherus_agassizii
ENSDARG00000011079	wdr3	100	71.564	ENSGGOG00000009982	WDR3	100	71.414	Gorilla_gorilla
ENSDARG00000011079	wdr3	99	82.784	ENSHBUG00000004367	wdr3	99	82.572	Haplochromis_burtoni
ENSDARG00000011079	wdr3	100	71.247	ENSHGLG00000017936	WDR3	100	70.930	Heterocephalus_glaber_female
ENSDARG00000011079	wdr3	100	71.247	ENSHGLG00100008292	WDR3	100	70.930	Heterocephalus_glaber_male
ENSDARG00000011079	wdr3	100	71.503	ENSHCOG00000017501	wdr3	98	79.439	Hippocampus_comes
ENSDARG00000011079	wdr3	100	87.035	ENSIPUG00000003396	wdr3	100	87.035	Ictalurus_punctatus
ENSDARG00000011079	wdr3	100	71.353	ENSSTOG00000003504	WDR3	100	71.142	Ictidomys_tridecemlineatus
ENSDARG00000011079	wdr3	100	70.074	ENSJJAG00000013861	Wdr3	100	70.327	Jaculus_jaculus
ENSDARG00000011079	wdr3	99	80.635	ENSKMAG00000016004	wdr3	99	82.327	Kryptolebias_marmoratus
ENSDARG00000011079	wdr3	99	78.122	ENSLBEG00000013757	wdr3	99	77.908	Labrus_bergylta
ENSDARG00000011079	wdr3	98	67.240	ENSLACG00000014259	WDR3	98	67.238	Latimeria_chalumnae
ENSDARG00000011079	wdr3	99	75.987	ENSLOCG00000011052	wdr3	99	76.094	Lepisosteus_oculatus
ENSDARG00000011079	wdr3	100	71.278	ENSLAFG00000012108	WDR3	100	71.067	Loxodonta_africana
ENSDARG00000011079	wdr3	100	71.459	ENSMFAG00000034570	WDR3	100	71.308	Macaca_fascicularis
ENSDARG00000011079	wdr3	100	71.353	ENSMMUG00000008513	WDR3	100	71.203	Macaca_mulatta
ENSDARG00000011079	wdr3	100	71.459	ENSMNEG00000039555	WDR3	100	71.308	Macaca_nemestrina
ENSDARG00000011079	wdr3	100	71.247	ENSMLEG00000035516	WDR3	100	71.203	Mandrillus_leucophaeus
ENSDARG00000011079	wdr3	99	78.549	ENSMAMG00000020737	wdr3	99	78.442	Mastacembelus_armatus
ENSDARG00000011079	wdr3	99	77.943	ENSMZEG00005019253	wdr3	99	77.731	Maylandia_zebra
ENSDARG00000011079	wdr3	98	70.864	ENSMGAG00000014241	WDR3	99	66.275	Meleagris_gallopavo
ENSDARG00000011079	wdr3	100	70.233	ENSMAUG00000002574	Wdr3	100	69.915	Mesocricetus_auratus
ENSDARG00000011079	wdr3	100	71.882	ENSMICG00000001783	WDR3	100	71.520	Microcebus_murinus
ENSDARG00000011079	wdr3	100	70.688	ENSMOCG00000014361	Wdr3	100	70.053	Microtus_ochrogaster
ENSDARG00000011079	wdr3	99	77.094	ENSMMOG00000019419	wdr3	99	77.094	Mola_mola
ENSDARG00000011079	wdr3	100	71.776	ENSMODG00000005243	WDR3	100	71.564	Monodelphis_domestica
ENSDARG00000011079	wdr3	99	73.511	ENSMALG00000016265	wdr3	100	73.858	Monopterus_albus
ENSDARG00000011079	wdr3	100	69.630	MGP_CAROLIEiJ_G0025421	Wdr3	100	69.206	Mus_caroli
ENSDARG00000011079	wdr3	100	69.630	ENSMUSG00000033285	Wdr3	100	69.524	Mus_musculus
ENSDARG00000011079	wdr3	100	69.841	MGP_PahariEiJ_G0026865	Wdr3	100	69.735	Mus_pahari
ENSDARG00000011079	wdr3	100	69.418	MGP_SPRETEiJ_G0026371	Wdr3	100	69.312	Mus_spretus
ENSDARG00000011079	wdr3	100	71.005	ENSMPUG00000001565	WDR3	100	70.899	Mustela_putorius_furo
ENSDARG00000011079	wdr3	100	71.459	ENSMLUG00000003500	WDR3	100	71.142	Myotis_lucifugus
ENSDARG00000011079	wdr3	100	70.869	ENSNGAG00000021117	Wdr3	100	70.551	Nannospalax_galili
ENSDARG00000011079	wdr3	99	74.149	ENSNBRG00000015140	wdr3	99	74.362	Neolamprologus_brichardi
ENSDARG00000011079	wdr3	100	71.142	ENSNLEG00000005304	WDR3	100	70.992	Nomascus_leucogenys
ENSDARG00000011079	wdr3	95	84.483	ENSMEUG00000009673	WDR3	81	84.483	Notamacropus_eugenii
ENSDARG00000011079	wdr3	100	64.979	ENSOPRG00000001857	WDR3	94	69.775	Ochotona_princeps
ENSDARG00000011079	wdr3	93	71.804	ENSODEG00000000136	WDR3	100	71.804	Octodon_degus
ENSDARG00000011079	wdr3	99	82.040	ENSONIG00000015678	wdr3	99	82.253	Oreochromis_niloticus
ENSDARG00000011079	wdr3	100	67.508	ENSOANG00000003070	WDR3	100	68.544	Ornithorhynchus_anatinus
ENSDARG00000011079	wdr3	100	71.564	ENSOCUG00000007572	WDR3	100	71.308	Oryctolagus_cuniculus
ENSDARG00000011079	wdr3	99	79.574	ENSORLG00020022391	wdr3	99	79.894	Oryzias_latipes_hni
ENSDARG00000011079	wdr3	99	79.574	ENSORLG00015023208	wdr3	99	79.894	Oryzias_latipes_hsok
ENSDARG00000011079	wdr3	99	80.340	ENSOMEG00000017592	wdr3	100	80.720	Oryzias_melastigma
ENSDARG00000011079	wdr3	100	71.806	ENSOGAG00000007399	WDR3	100	71.776	Otolemur_garnettii
ENSDARG00000011079	wdr3	100	71.097	ENSOARG00000020325	WDR3	100	70.781	Ovis_aries
ENSDARG00000011079	wdr3	100	71.564	ENSPPAG00000029068	WDR3	100	71.414	Pan_paniscus
ENSDARG00000011079	wdr3	100	70.613	ENSPPRG00000022972	WDR3	100	70.402	Panthera_pardus
ENSDARG00000011079	wdr3	100	70.613	ENSPTIG00000016747	WDR3	100	70.402	Panthera_tigris_altaica
ENSDARG00000011079	wdr3	100	71.564	ENSPTRG00000001168	WDR3	100	71.414	Pan_troglodytes
ENSDARG00000011079	wdr3	100	71.459	ENSPANG00000020680	WDR3	100	71.308	Papio_anubis
ENSDARG00000011079	wdr3	99	83.885	ENSPKIG00000024900	wdr3	99	83.885	Paramormyrops_kingsleyae
ENSDARG00000011079	wdr3	99	71.125	ENSPSIG00000017455	WDR3	99	70.913	Pelodiscus_sinensis
ENSDARG00000011079	wdr3	98	79.325	ENSPMGG00000022686	wdr3	99	78.237	Periophthalmus_magnuspinnatus
ENSDARG00000011079	wdr3	100	70.127	ENSPEMG00000011928	Wdr3	100	69.809	Peromyscus_maniculatus_bairdii
ENSDARG00000011079	wdr3	95	71.158	ENSPCIG00000000938	WDR3	99	70.997	Phascolarctos_cinereus
ENSDARG00000011079	wdr3	99	81.018	ENSPFOG00000017900	wdr3	99	80.806	Poecilia_formosa
ENSDARG00000011079	wdr3	99	81.124	ENSPLAG00000014362	wdr3	99	80.912	Poecilia_latipinna
ENSDARG00000011079	wdr3	100	71.429	ENSPPYG00000000970	WDR3	100	71.278	Pongo_abelii
ENSDARG00000011079	wdr3	92	57.670	ENSPCAG00000001265	WDR3	99	57.324	Procavia_capensis
ENSDARG00000011079	wdr3	99	76.980	ENSPNYG00000006217	wdr3	99	76.483	Pundamilia_nyererei
ENSDARG00000011079	wdr3	100	86.887	ENSPNAG00000006843	wdr3	100	86.887	Pygocentrus_nattereri
ENSDARG00000011079	wdr3	100	69.312	ENSRNOG00000019670	Wdr3	100	69.206	Rattus_norvegicus
ENSDARG00000011079	wdr3	99	70.638	ENSRBIG00000039149	WDR3	97	70.194	Rhinopithecus_bieti
ENSDARG00000011079	wdr3	100	71.142	ENSRROG00000028066	WDR3	100	70.992	Rhinopithecus_roxellana
ENSDARG00000011079	wdr3	99	37.257	YLR129W	DIP2	98	37.253	Saccharomyces_cerevisiae
ENSDARG00000011079	wdr3	100	71.776	ENSSBOG00000015569	WDR3	100	71.519	Saimiri_boliviensis_boliviensis
ENSDARG00000011079	wdr3	100	70.464	ENSSHAG00000005169	WDR3	100	70.148	Sarcophilus_harrisii
ENSDARG00000011079	wdr3	99	81.663	ENSSFOG00015000595	wdr3	99	81.557	Scleropages_formosus
ENSDARG00000011079	wdr3	99	80.276	ENSSMAG00000008334	wdr3	100	80.508	Scophthalmus_maximus
ENSDARG00000011079	wdr3	99	82.040	ENSSDUG00000014276	wdr3	99	82.147	Seriola_dumerili
ENSDARG00000011079	wdr3	99	81.383	ENSSLDG00000012837	wdr3	99	81.383	Seriola_lalandi_dorsalis
ENSDARG00000011079	wdr3	94	65.432	ENSSARG00000002347	WDR3	100	64.871	Sorex_araneus
ENSDARG00000011079	wdr3	99	65.143	ENSSPUG00000005582	WDR3	99	65.143	Sphenodon_punctatus
ENSDARG00000011079	wdr3	100	70.930	ENSSSCG00000006727	WDR3	100	70.613	Sus_scrofa
ENSDARG00000011079	wdr3	98	68.797	ENSTGUG00000013357	WDR3	99	68.399	Taeniopygia_guttata
ENSDARG00000011079	wdr3	99	79.193	ENSTRUG00000002727	wdr3	99	78.662	Takifugu_rubripes
ENSDARG00000011079	wdr3	98	77.416	ENSTNIG00000005299	wdr3	98	76.623	Tetraodon_nigroviridis
ENSDARG00000011079	wdr3	77	76.562	ENSTBEG00000002549	WDR3	74	76.562	Tupaia_belangeri
ENSDARG00000011079	wdr3	100	74.586	ENSTTRG00000003817	WDR3	94	74.586	Tursiops_truncatus
ENSDARG00000011079	wdr3	100	67.373	ENSUAMG00000023139	WDR3	100	66.490	Ursus_americanus
ENSDARG00000011079	wdr3	90	69.971	ENSVPAG00000000073	WDR3	89	69.971	Vicugna_pacos
ENSDARG00000011079	wdr3	100	70.719	ENSVVUG00000010629	WDR3	100	70.507	Vulpes_vulpes
ENSDARG00000011079	wdr3	98	70.314	ENSXETG00000009920	wdr3	98	70.302	Xenopus_tropicalis
ENSDARG00000011079	wdr3	99	80.806	ENSXMAG00000009827	wdr3	99	80.276	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	21873635.	IBA	Component