EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSDARG00000011245 (Gene tree)
Gene ID: 560190
Gene Symbol: esrp1
Alias: rbm35a|wu:fi28a07|zgc:154050
Full Name: epithelial splicing regulatory protein 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 31023 bases
Position: chr16:26645663-26676685
Accession: ZDB-GENE-070112-1732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000094207	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000103431	-	3669	XM_005158027	ENSDARP00000094207	714 (aa)	XP_005158084	A1L1G1

Gene Model

Click here to download ENSDARG00000011245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000011245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000011245	esrp1	98	56.815	ENSDARG00000018814	esrp2	98	57.027
ENSDARG00000011245	esrp1	50	40.426	ENSDARG00000039466	hnrnph3	98	35.789
ENSDARG00000011245	esrp1	50	41.753	ENSDARG00000005551	hnrnph1l	86	33.791

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	-	ISS	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0043484	regulation of RNA splicing	-	ISS	Process