EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000012044 (Gene tree)
Gene ID: 447901
Gene Symbol: polr3gla
Alias: sb:cb265|zgc:101594
Full Name: polymerase (RNA) III (DNA directed) polypeptide G like a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10219 bases
Position: chr19:24545731-24555949
Accession: ZDB-GENE-040912-67
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000123396	RNA_pol_3_Rpc31	PF11705.8	5e-39	1	1
ENSDARP00000143290	RNA_pol_3_Rpc31	PF11705.8	5e-39	1	1
ENSDARP00000137757	RNA_pol_3_Rpc31	PF11705.8	4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000162801	-	771	-	ENSDARP00000137757	179 (aa)	-	A0A0R4INA2
ENSDART00000176022	-	1590	-	ENSDARP00000143290	221 (aa)	-	Q1LWT2
ENSDART00000132660	-	1287	-	ENSDARP00000123396	221 (aa)	-	Q1LWT2

Gene Model

Click here to download ENSDARG00000012044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000012044	polr3gla	100	49.776	ENSDARG00000024687	polr3g	100	49.550
ENSDARG00000012044	polr3gla	99	55.251	ENSDARG00000013734	polr3glb	100	53.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000012044	polr3gla	100	57.466	ENSAMXG00000001802	polr3glb	100	56.109	Astyanax_mexicanus
ENSDARG00000012044	polr3gla	100	70.852	ENSAMXG00000031351	polr3gla	100	69.955	Astyanax_mexicanus
ENSDARG00000012044	polr3gla	95	59.242	ENSCPBG00000007959	-	100	59.009	Chrysemys_picta_bellii
ENSDARG00000012044	polr3gla	95	54.930	ENSELUG00000008311	polr3glb	100	55.556	Esox_lucius
ENSDARG00000012044	polr3gla	100	66.368	ENSELUG00000013880	polr3gla	100	66.368	Esox_lucius
ENSDARG00000012044	polr3gla	100	59.276	ENSIPUG00000003803	polr3gl	100	57.014	Ictalurus_punctatus
ENSDARG00000012044	polr3gla	95	70.616	ENSIPUG00000018691	polr3gla	100	67.411	Ictalurus_punctatus
ENSDARG00000012044	polr3gla	100	56.502	ENSLACG00000013217	-	99	55.605	Latimeria_chalumnae
ENSDARG00000012044	polr3gla	100	59.729	ENSLOCG00000008195	polr3glb	99	60.633	Lepisosteus_oculatus
ENSDARG00000012044	polr3gla	95	58.019	ENSPSIG00000010726	-	100	57.589	Pelodiscus_sinensis
ENSDARG00000012044	polr3gla	100	57.919	ENSPNAG00000000732	polr3glb	100	56.561	Pygocentrus_nattereri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process