EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000012141 (Gene tree)
Gene ID: 393593
Gene Symbol: papolg
Alias: zgc:63762
Full Name: poly(A) polymerase gamma
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 17730 bases
Position: chr13:25824345-25842074
Accession: ZDB-GENE-040426-1256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000015948	PAP_RNA-bind	PF04926.15	7.9e-29	1	2
ENSDARP00000015948	PAP_RNA-bind	PF04926.15	7.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000015154	-	3485	XM_005156791	ENSDARP00000015948	744 (aa)	XP_005156848	A2BGL0
ENSDART00000142640	-	754	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000012141's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000012141	papolg	98	59.592	ENSDARG00000009585	papola	69	77.046

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000012141	papolg	100	73.677	ENSG00000115421	PAPOLG	100	87.607	Homo_sapiens
ENSDARG00000012141	papolg	100	81.142	ENSAPOG00000004798	papolg	99	81.142	Acanthochromis_polyacanthus
ENSDARG00000012141	papolg	99	72.922	ENSAMEG00000018227	PAPOLG	99	73.592	Ailuropoda_melanoleuca
ENSDARG00000012141	papolg	100	74.301	ENSACIG00000010546	papolg	99	74.834	Amphilophus_citrinellus
ENSDARG00000012141	papolg	100	80.851	ENSAOCG00000010254	papolg	99	80.851	Amphiprion_ocellaris
ENSDARG00000012141	papolg	100	80.851	ENSAPEG00000006944	papolg	99	80.851	Amphiprion_percula
ENSDARG00000012141	papolg	100	80.293	ENSATEG00000009007	papolg	99	80.826	Anabas_testudineus
ENSDARG00000012141	papolg	98	67.564	ENSAPLG00000006813	PAPOLG	99	66.533	Anas_platyrhynchos
ENSDARG00000012141	papolg	80	60.131	ENSACAG00000015048	-	100	60.131	Anolis_carolinensis
ENSDARG00000012141	papolg	100	73.148	ENSANAG00000024627	PAPOLG	100	73.148	Aotus_nancymaae
ENSDARG00000012141	papolg	100	76.943	ENSACLG00000015592	papolg	99	78.776	Astatotilapia_calliptera
ENSDARG00000012141	papolg	100	85.867	ENSAMXG00000004611	papolg	100	85.867	Astyanax_mexicanus
ENSDARG00000012141	papolg	100	73.377	ENSBTAG00000007414	PAPOLG	100	73.377	Bos_taurus
ENSDARG00000012141	papolg	100	73.545	ENSCJAG00000009102	PAPOLG	100	73.545	Callithrix_jacchus
ENSDARG00000012141	papolg	100	72.679	ENSCAFG00000002975	PAPOLG	91	73.342	Canis_familiaris
ENSDARG00000012141	papolg	100	72.644	ENSCAFG00020026859	PAPOLG	100	72.787	Canis_lupus_dingo
ENSDARG00000012141	papolg	100	73.245	ENSCHIG00000015082	PAPOLG	100	73.245	Capra_hircus
ENSDARG00000012141	papolg	100	73.148	ENSTSYG00000004947	PAPOLG	100	73.148	Carlito_syrichta
ENSDARG00000012141	papolg	51	81.627	ENSCAPG00000014901	-	100	81.627	Cavia_aperea
ENSDARG00000012141	papolg	100	73.642	ENSCPOG00000010306	PAPOLG	100	73.642	Cavia_porcellus
ENSDARG00000012141	papolg	100	73.677	ENSCCAG00000026893	PAPOLG	100	73.677	Cebus_capucinus
ENSDARG00000012141	papolg	91	81.974	ENSCATG00000044395	PAPOLG	100	81.974	Cercocebus_atys
ENSDARG00000012141	papolg	100	73.148	ENSCLAG00000008603	PAPOLG	100	73.148	Chinchilla_lanigera
ENSDARG00000012141	papolg	100	73.545	ENSCSAG00000014408	PAPOLG	100	73.545	Chlorocebus_sabaeus
ENSDARG00000012141	papolg	89	72.173	ENSCHOG00000014028	PAPOLG	100	72.173	Choloepus_hoffmanni
ENSDARG00000012141	papolg	66	63.895	ENSCING00000024664	-	92	63.895	Ciona_intestinalis
ENSDARG00000012141	papolg	65	65.155	ENSCSAVG00000009085	-	97	65.155	Ciona_savignyi
ENSDARG00000012141	papolg	100	73.545	ENSCANG00000038120	PAPOLG	100	73.545	Colobus_angolensis_palliatus
ENSDARG00000012141	papolg	99	73.253	ENSCGRG00001014951	Papolg	99	73.253	Cricetulus_griseus_chok1gshd
ENSDARG00000012141	papolg	99	73.253	ENSCGRG00000005552	-	99	73.253	Cricetulus_griseus_crigri
ENSDARG00000012141	papolg	100	75.632	ENSCSEG00000000771	papolg	99	76.862	Cynoglossus_semilaevis
ENSDARG00000012141	papolg	100	74.189	ENSCVAG00000016602	papolg	89	90.220	Cyprinodon_variegatus
ENSDARG00000012141	papolg	100	70.728	ENSDNOG00000011326	PAPOLG	100	70.728	Dasypus_novemcinctus
ENSDARG00000012141	papolg	58	86.311	ENSDORG00000016228	Papolg	100	86.311	Dipodomys_ordii
ENSDARG00000012141	papolg	99	58.753	ENSETEG00000011815	PAPOLG	100	58.995	Echinops_telfairi
ENSDARG00000012141	papolg	58	72.251	ENSEBUG00000004020	papolg	89	72.251	Eptatretus_burgeri
ENSDARG00000012141	papolg	63	56.503	ENSEBUG00000005042	-	84	54.878	Eptatretus_burgeri
ENSDARG00000012141	papolg	100	72.884	ENSEASG00005002038	PAPOLG	100	73.545	Equus_asinus_asinus
ENSDARG00000012141	papolg	100	72.884	ENSECAG00000009859	PAPOLG	98	73.663	Equus_caballus
ENSDARG00000012141	papolg	100	65.125	ENSEEUG00000006196	PAPOLG	100	65.125	Erinaceus_europaeus
ENSDARG00000012141	papolg	100	80.460	ENSELUG00000014497	papolg	98	80.918	Esox_lucius
ENSDARG00000012141	papolg	100	73.148	ENSFCAG00000026126	PAPOLG	100	73.148	Felis_catus
ENSDARG00000012141	papolg	99	59.974	ENSFALG00000011079	PAPOLG	97	59.974	Ficedula_albicollis
ENSDARG00000012141	papolg	100	73.280	ENSFDAG00000010662	PAPOLG	97	73.280	Fukomys_damarensis
ENSDARG00000012141	papolg	66	71.709	ENSFHEG00000019080	papolg	90	71.345	Fundulus_heteroclitus
ENSDARG00000012141	papolg	88	89.388	ENSGMOG00000018772	papolg	93	89.388	Gadus_morhua
ENSDARG00000012141	papolg	99	63.841	ENSGALG00000007853	PAPOLG	100	63.576	Gallus_gallus
ENSDARG00000012141	papolg	100	75.591	ENSGAFG00000003263	papolg	99	75.722	Gambusia_affinis
ENSDARG00000012141	papolg	100	78.215	ENSGACG00000002718	papolg	100	79.681	Gasterosteus_aculeatus
ENSDARG00000012141	papolg	100	73.677	ENSGGOG00000006083	PAPOLG	100	73.677	Gorilla_gorilla
ENSDARG00000012141	papolg	100	76.943	ENSHBUG00000004882	papolg	99	79.365	Haplochromis_burtoni
ENSDARG00000012141	papolg	99	73.797	ENSHGLG00000019610	PAPOLG	99	73.797	Heterocephalus_glaber_female
ENSDARG00000012141	papolg	100	73.677	ENSHGLG00100010429	PAPOLG	99	73.677	Heterocephalus_glaber_male
ENSDARG00000012141	papolg	100	78.695	ENSHCOG00000006782	papolg	99	78.695	Hippocampus_comes
ENSDARG00000012141	papolg	100	86.152	ENSIPUG00000021642	papolg	100	86.152	Ictalurus_punctatus
ENSDARG00000012141	papolg	100	73.280	ENSSTOG00000010861	PAPOLG	100	73.280	Ictidomys_tridecemlineatus
ENSDARG00000012141	papolg	58	86.543	ENSJJAG00000015601	Papolg	100	86.543	Jaculus_jaculus
ENSDARG00000012141	papolg	100	78.780	ENSKMAG00000016439	papolg	99	78.780	Kryptolebias_marmoratus
ENSDARG00000012141	papolg	100	75.823	ENSLBEG00000023218	papolg	99	77.001	Labrus_bergylta
ENSDARG00000012141	papolg	99	67.507	ENSLACG00000009543	PAPOLG	100	67.507	Latimeria_chalumnae
ENSDARG00000012141	papolg	100	81.046	ENSLOCG00000016130	papolg	100	81.046	Lepisosteus_oculatus
ENSDARG00000012141	papolg	100	73.184	ENSLAFG00000010404	PAPOLG	99	86.761	Loxodonta_africana
ENSDARG00000012141	papolg	100	73.016	ENSMFAG00000042450	PAPOLG	100	73.677	Macaca_fascicularis
ENSDARG00000012141	papolg	100	73.016	ENSMMUG00000000498	PAPOLG	100	73.677	Macaca_mulatta
ENSDARG00000012141	papolg	100	65.572	ENSMNEG00000035939	PAPOLG	100	66.229	Macaca_nemestrina
ENSDARG00000012141	papolg	100	73.148	ENSMLEG00000039462	PAPOLG	100	73.810	Mandrillus_leucophaeus
ENSDARG00000012141	papolg	100	80.186	ENSMAMG00000010667	papolg	99	81.377	Mastacembelus_armatus
ENSDARG00000012141	papolg	100	76.943	ENSMZEG00005018140	papolg	99	78.776	Maylandia_zebra
ENSDARG00000012141	papolg	99	63.904	ENSMGAG00000001741	PAPOLG	99	63.636	Meleagris_gallopavo
ENSDARG00000012141	papolg	99	73.790	ENSMAUG00000009088	Papolg	99	73.790	Mesocricetus_auratus
ENSDARG00000012141	papolg	100	73.148	ENSMICG00000010042	PAPOLG	100	72.884	Microcebus_murinus
ENSDARG00000012141	papolg	100	73.351	ENSMOCG00000006857	Papolg	100	73.351	Microtus_ochrogaster
ENSDARG00000012141	papolg	100	80.106	ENSMMOG00000008020	papolg	99	80.106	Mola_mola
ENSDARG00000012141	papolg	98	73.861	ENSMODG00000002160	PAPOLG	99	73.861	Monodelphis_domestica
ENSDARG00000012141	papolg	100	79.122	ENSMALG00000007012	papolg	99	80.478	Monopterus_albus
ENSDARG00000012141	papolg	100	73.377	MGP_CAROLIEiJ_G0016144	Papolg	99	87.150	Mus_caroli
ENSDARG00000012141	papolg	100	73.677	ENSMUSG00000020273	Papolg	99	87.150	Mus_musculus
ENSDARG00000012141	papolg	100	72.980	MGP_PahariEiJ_G0016746	Papolg	100	72.980	Mus_pahari
ENSDARG00000012141	papolg	100	73.810	MGP_SPRETEiJ_G0016987	Papolg	99	87.150	Mus_spretus
ENSDARG00000012141	papolg	100	72.546	ENSMPUG00000005165	PAPOLG	90	73.210	Mustela_putorius_furo
ENSDARG00000012141	papolg	99	73.396	ENSMLUG00000009853	PAPOLG	99	73.396	Myotis_lucifugus
ENSDARG00000012141	papolg	100	73.245	ENSNGAG00000001120	Papolg	100	73.245	Nannospalax_galili
ENSDARG00000012141	papolg	100	69.605	ENSNBRG00000011943	papolg	99	70.395	Neolamprologus_brichardi
ENSDARG00000012141	papolg	58	86.311	ENSNLEG00000009507	-	100	86.311	Nomascus_leucogenys
ENSDARG00000012141	papolg	63	67.568	ENSMEUG00000013605	-	68	67.568	Notamacropus_eugenii
ENSDARG00000012141	papolg	100	72.727	ENSOPRG00000009630	PAPOLG	100	72.727	Ochotona_princeps
ENSDARG00000012141	papolg	57	83.924	ENSODEG00000012424	PAPOLG	99	83.924	Octodon_degus
ENSDARG00000012141	papolg	100	71.958	ENSONIG00000002985	papolg	100	72.776	Oreochromis_niloticus
ENSDARG00000012141	papolg	99	73.491	ENSOANG00000012403	PAPOLG	99	73.491	Ornithorhynchus_anatinus
ENSDARG00000012141	papolg	100	73.148	ENSOCUG00000004962	PAPOLG	100	73.148	Oryctolagus_cuniculus
ENSDARG00000012141	papolg	100	76.862	ENSORLG00000001577	papolg	99	77.527	Oryzias_latipes
ENSDARG00000012141	papolg	100	76.596	ENSORLG00020002482	papolg	99	77.394	Oryzias_latipes_hni
ENSDARG00000012141	papolg	100	76.596	ENSORLG00015008836	papolg	99	77.261	Oryzias_latipes_hsok
ENSDARG00000012141	papolg	100	77.261	ENSOMEG00000001406	papolg	99	77.586	Oryzias_melastigma
ENSDARG00000012141	papolg	58	62.217	ENSOGAG00000003145	PAPOLG	100	62.217	Otolemur_garnettii
ENSDARG00000012141	papolg	100	73.377	ENSOARG00000001563	PAPOLG	91	73.377	Ovis_aries
ENSDARG00000012141	papolg	100	73.677	ENSPPAG00000019917	PAPOLG	100	73.677	Pan_paniscus
ENSDARG00000012141	papolg	100	73.148	ENSPPRG00000023250	PAPOLG	100	73.148	Panthera_pardus
ENSDARG00000012141	papolg	100	73.016	ENSPTIG00000018126	PAPOLG	100	73.016	Panthera_tigris_altaica
ENSDARG00000012141	papolg	100	73.677	ENSPTRG00000011948	PAPOLG	100	73.677	Pan_troglodytes
ENSDARG00000012141	papolg	100	69.657	ENSPANG00000014543	PAPOLG	100	70.317	Papio_anubis
ENSDARG00000012141	papolg	100	79.470	ENSPKIG00000003313	papolg	100	79.470	Paramormyrops_kingsleyae
ENSDARG00000012141	papolg	92	77.746	ENSPKIG00000006027	PAPOLG	97	77.746	Paramormyrops_kingsleyae
ENSDARG00000012141	papolg	98	70.187	ENSPSIG00000013663	PAPOLG	98	70.187	Pelodiscus_sinensis
ENSDARG00000012141	papolg	99	73.494	ENSPEMG00000008960	-	99	73.494	Peromyscus_maniculatus_bairdii
ENSDARG00000012141	papolg	98	53.056	ENSPMAG00000002961	papolg	99	52.214	Petromyzon_marinus
ENSDARG00000012141	papolg	66	63.581	ENSPMAG00000004864	-	98	63.581	Petromyzon_marinus
ENSDARG00000012141	papolg	100	73.107	ENSPCIG00000028094	PAPOLG	100	73.107	Phascolarctos_cinereus
ENSDARG00000012141	papolg	100	76.222	ENSPFOG00000012909	papolg	99	76.416	Poecilia_formosa
ENSDARG00000012141	papolg	100	76.058	ENSPLAG00000018445	papolg	99	76.347	Poecilia_latipinna
ENSDARG00000012141	papolg	100	76.222	ENSPMEG00000003961	papolg	99	76.649	Poecilia_mexicana
ENSDARG00000012141	papolg	100	74.935	ENSPREG00000010358	papolg	99	74.935	Poecilia_reticulata
ENSDARG00000012141	papolg	100	73.280	ENSPPYG00000012392	PAPOLG	100	73.280	Pongo_abelii
ENSDARG00000012141	papolg	99	64.847	ENSPCAG00000012297	PAPOLG	93	81.551	Procavia_capensis
ENSDARG00000012141	papolg	100	65.828	ENSPCOG00000027306	PAPOLG	100	66.711	Propithecus_coquereli
ENSDARG00000012141	papolg	88	81.216	ENSPVAG00000013541	PAPOLG	88	81.216	Pteropus_vampyrus
ENSDARG00000012141	papolg	100	76.943	ENSPNYG00000006729	papolg	99	78.776	Pundamilia_nyererei
ENSDARG00000012141	papolg	100	85.600	ENSPNAG00000015521	papolg	100	85.600	Pygocentrus_nattereri
ENSDARG00000012141	papolg	100	73.510	ENSRNOG00000006261	Papolg	100	73.510	Rattus_norvegicus
ENSDARG00000012141	papolg	100	68.783	ENSRBIG00000040086	PAPOLG	100	68.783	Rhinopithecus_bieti
ENSDARG00000012141	papolg	100	73.413	ENSRROG00000035954	PAPOLG	100	73.413	Rhinopithecus_roxellana
ENSDARG00000012141	papolg	100	73.016	ENSSBOG00000026194	PAPOLG	100	73.677	Saimiri_boliviensis_boliviensis
ENSDARG00000012141	papolg	94	73.810	ENSSHAG00000014942	PAPOLG	99	73.810	Sarcophilus_harrisii
ENSDARG00000012141	papolg	100	65.344	ENSSFOG00015011874	papolg	100	65.344	Scleropages_formosus
ENSDARG00000012141	papolg	100	76.096	ENSSFOG00015002383	papolg	100	76.096	Scleropages_formosus
ENSDARG00000012141	papolg	87	88.929	ENSSMAG00000015598	papolg	98	75.924	Scophthalmus_maximus
ENSDARG00000012141	papolg	100	79.521	ENSSDUG00000000912	papolg	99	79.521	Seriola_dumerili
ENSDARG00000012141	papolg	100	79.654	ENSSLDG00000001217	papolg	99	79.654	Seriola_lalandi_dorsalis
ENSDARG00000012141	papolg	99	70.199	ENSSPUG00000007491	PAPOLG	100	70.199	Sphenodon_punctatus
ENSDARG00000012141	papolg	100	78.396	ENSSPAG00000009004	papolg	99	78.396	Stegastes_partitus
ENSDARG00000012141	papolg	100	73.677	ENSSSCG00000008389	PAPOLG	100	73.677	Sus_scrofa
ENSDARG00000012141	papolg	71	72.075	ENSTGUG00000006762	PAPOLG	98	72.075	Taeniopygia_guttata
ENSDARG00000012141	papolg	100	77.291	ENSTRUG00000006410	papolg	99	77.291	Takifugu_rubripes
ENSDARG00000012141	papolg	100	73.168	ENSTNIG00000017106	papolg	100	73.168	Tetraodon_nigroviridis
ENSDARG00000012141	papolg	99	66.711	ENSTBEG00000002609	PAPOLG	100	66.711	Tupaia_belangeri
ENSDARG00000012141	papolg	100	69.312	ENSTTRG00000006237	PAPOLG	100	69.974	Tursiops_truncatus
ENSDARG00000012141	papolg	100	72.244	ENSUAMG00000011088	PAPOLG	100	72.908	Ursus_americanus
ENSDARG00000012141	papolg	99	73.217	ENSUMAG00000019081	PAPOLG	90	73.890	Ursus_maritimus
ENSDARG00000012141	papolg	99	69.652	ENSVPAG00000000492	PAPOLG	100	70.321	Vicugna_pacos
ENSDARG00000012141	papolg	100	72.427	ENSVVUG00000010344	PAPOLG	99	73.087	Vulpes_vulpes
ENSDARG00000012141	papolg	100	70.196	ENSXETG00000002208	papolg	100	70.196	Xenopus_tropicalis
ENSDARG00000012141	papolg	67	90.543	ENSXCOG00000006611	papolg	73	90.543	Xiphophorus_couchianus
ENSDARG00000012141	papolg	73	87.952	ENSXMAG00000007383	papolg	94	87.952	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004652	polynucleotide adenylyltransferase activity	21873635.	IBA	Function
GO:0004652	polynucleotide adenylyltransferase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0006378	mRNA polyadenylation	21873635.	IBA	Process
GO:0016779	nucleotidyltransferase activity	-	IEA	Function
GO:0031123	RNA 3'-end processing	-	IEA	Process
GO:0043631	RNA polyadenylation	-	IEA	Process