EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000012389 (Gene tree)
Gene ID: 58119
Gene Symbol: adar
Alias: drada|red1|wu:fc22a02
Full Name: adenosine deaminase%2C RNA-specific
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 26132 bases
Position: chr16:23531583-23557714
Accession: ZDB-GENE-000616-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115965	z-alpha	PF02295.17	1.9e-25	1	2
ENSDARP00000115965	z-alpha	PF02295.17	1.9e-25	2	2
ENSDARP00000115965	dsrm	PF00035.26	1.3e-40	1	3
ENSDARP00000115965	dsrm	PF00035.26	1.3e-40	2	3
ENSDARP00000115965	dsrm	PF00035.26	1.3e-40	3	3
ENSDARP00000115965	A_deamin	PF02137.18	1.1e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000146708	-	5421	XM_009292255	ENSDARP00000115965	1381 (aa)	XP_009290530	E9QIW2

Gene Model

Click here to download ENSDARG00000012389's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000012389	adar	80	47.190	ENSG00000160710	ADAR	99	50.469	Homo_sapiens
ENSDARG00000012389	adar	98	56.127	ENSAPOG00000023804	adar	99	56.669	Acanthochromis_polyacanthus
ENSDARG00000012389	adar	78	47.359	ENSAMEG00000011594	ADAR	88	47.359	Ailuropoda_melanoleuca
ENSDARG00000012389	adar	98	55.913	ENSAOCG00000020750	adar	99	56.180	Amphiprion_ocellaris
ENSDARG00000012389	adar	98	55.353	ENSAPEG00000004762	adar	99	56.589	Amphiprion_percula
ENSDARG00000012389	adar	98	55.830	ENSATEG00000023684	adar	98	56.268	Anabas_testudineus
ENSDARG00000012389	adar	67	53.001	ENSAPLG00000009658	ADAR	97	48.450	Anas_platyrhynchos
ENSDARG00000012389	adar	80	46.360	ENSANAG00000007524	ADAR	99	50.155	Aotus_nancymaae
ENSDARG00000012389	adar	98	55.656	ENSACLG00000019448	adar	93	58.358	Astatotilapia_calliptera
ENSDARG00000012389	adar	97	62.966	ENSAMXG00000016460	adar	99	62.966	Astyanax_mexicanus
ENSDARG00000012389	adar	79	47.779	ENSBTAG00000007519	ADAR	91	47.688	Bos_taurus
ENSDARG00000012389	adar	90	42.687	ENSCJAG00000009410	ADAR	91	42.175	Callithrix_jacchus
ENSDARG00000012389	adar	67	52.391	ENSCAFG00000017169	ADAR	90	47.527	Canis_familiaris
ENSDARG00000012389	adar	70	58.974	ENSCAFG00020008204	ADAR	77	58.974	Canis_lupus_dingo
ENSDARG00000012389	adar	79	46.378	ENSCHIG00000017156	ADAR	89	46.133	Capra_hircus
ENSDARG00000012389	adar	72	50.574	ENSTSYG00000013129	ADAR	99	50.939	Carlito_syrichta
ENSDARG00000012389	adar	80	46.404	ENSCAPG00000016091	ADAR	89	46.678	Cavia_aperea
ENSDARG00000012389	adar	80	46.491	ENSCPOG00000005463	ADAR	91	46.236	Cavia_porcellus
ENSDARG00000012389	adar	80	45.569	ENSCCAG00000028498	ADAR	89	45.301	Cebus_capucinus
ENSDARG00000012389	adar	81	49.404	ENSCATG00000028528	ADAR	89	45.958	Cercocebus_atys
ENSDARG00000012389	adar	67	51.139	ENSCLAG00000005402	ADAR	99	50.777	Chinchilla_lanigera
ENSDARG00000012389	adar	74	50.671	ENSCSAG00000001964	ADAR	99	50.311	Chlorocebus_sabaeus
ENSDARG00000012389	adar	78	50.542	ENSCPBG00000024639	ADAR	99	55.427	Chrysemys_picta_bellii
ENSDARG00000012389	adar	80	46.407	ENSCANG00000040049	ADAR	89	46.363	Colobus_angolensis_palliatus
ENSDARG00000012389	adar	79	45.808	ENSCGRG00001013419	Adar	88	45.648	Cricetulus_griseus_chok1gshd
ENSDARG00000012389	adar	79	45.808	ENSCGRG00000010821	Adar	88	45.648	Cricetulus_griseus_crigri
ENSDARG00000012389	adar	97	54.377	ENSCSEG00000002318	adar	98	54.202	Cynoglossus_semilaevis
ENSDARG00000012389	adar	92	57.292	ENSCVAG00000022718	adar	98	55.594	Cyprinodon_variegatus
ENSDARG00000012389	adar	80	47.764	ENSDNOG00000008913	ADAR	88	47.740	Dasypus_novemcinctus
ENSDARG00000012389	adar	67	51.042	ENSDORG00000007813	Adar	99	51.097	Dipodomys_ordii
ENSDARG00000012389	adar	67	51.000	ENSETEG00000015007	ADAR	81	51.000	Echinops_telfairi
ENSDARG00000012389	adar	52	53.623	ENSEBUG00000005741	-	72	54.717	Eptatretus_burgeri
ENSDARG00000012389	adar	51	47.150	ENSEBUG00000010302	-	64	47.150	Eptatretus_burgeri
ENSDARG00000012389	adar	78	48.295	ENSEASG00005000290	ADAR	90	48.295	Equus_asinus_asinus
ENSDARG00000012389	adar	78	47.945	ENSECAG00000000974	ADAR	99	50.909	Equus_caballus
ENSDARG00000012389	adar	64	65.581	ENSEEUG00000014864	ADAR	61	65.581	Erinaceus_europaeus
ENSDARG00000012389	adar	97	58.044	ENSELUG00000012523	adar	96	71.188	Esox_lucius
ENSDARG00000012389	adar	70	58.000	ENSFCAG00000001341	ADAR	83	56.450	Felis_catus
ENSDARG00000012389	adar	78	48.361	ENSFALG00000001232	ADAR	98	48.092	Ficedula_albicollis
ENSDARG00000012389	adar	67	50.155	ENSFDAG00000016081	ADAR	99	50.361	Fukomys_damarensis
ENSDARG00000012389	adar	98	55.046	ENSFHEG00000021099	adar	98	54.584	Fundulus_heteroclitus
ENSDARG00000012389	adar	90	57.541	ENSGMOG00000019052	adar	98	57.887	Gadus_morhua
ENSDARG00000012389	adar	67	53.733	ENSGALG00000021475	ADAR1	82	53.661	Gallus_gallus
ENSDARG00000012389	adar	90	57.822	ENSGAFG00000014820	adar	98	55.348	Gambusia_affinis
ENSDARG00000012389	adar	90	58.084	ENSGACG00000011951	adar	96	58.697	Gasterosteus_aculeatus
ENSDARG00000012389	adar	78	50.860	ENSGAGG00000009803	ADAR	87	50.996	Gopherus_agassizii
ENSDARG00000012389	adar	80	46.221	ENSGGOG00000007156	ADAR	88	46.378	Gorilla_gorilla
ENSDARG00000012389	adar	98	55.649	ENSHBUG00000000091	adar	93	57.970	Haplochromis_burtoni
ENSDARG00000012389	adar	74	50.363	ENSHGLG00000017910	ADAR	99	50.671	Heterocephalus_glaber_female
ENSDARG00000012389	adar	73	50.521	ENSHGLG00100010770	ADAR	99	50.671	Heterocephalus_glaber_male
ENSDARG00000012389	adar	98	56.003	ENSHCOG00000007480	adar	99	56.003	Hippocampus_comes
ENSDARG00000012389	adar	97	59.899	ENSIPUG00000003263	adar	99	60.402	Ictalurus_punctatus
ENSDARG00000012389	adar	78	46.483	ENSSTOG00000014151	ADAR	88	46.661	Ictidomys_tridecemlineatus
ENSDARG00000012389	adar	79	47.069	ENSJJAG00000022056	Adar	89	47.069	Jaculus_jaculus
ENSDARG00000012389	adar	84	56.968	ENSKMAG00000002086	adar	91	56.691	Kryptolebias_marmoratus
ENSDARG00000012389	adar	97	54.328	ENSLBEG00000000352	adar	98	54.391	Labrus_bergylta
ENSDARG00000012389	adar	81	51.413	ENSLACG00000015329	ADAR	96	52.507	Latimeria_chalumnae
ENSDARG00000012389	adar	80	47.012	ENSLAFG00000017405	ADAR	90	47.222	Loxodonta_africana
ENSDARG00000012389	adar	81	46.376	ENSMFAG00000003217	ADAR	89	46.363	Macaca_fascicularis
ENSDARG00000012389	adar	81	46.376	ENSMMUG00000016093	ADAR	89	46.363	Macaca_mulatta
ENSDARG00000012389	adar	78	49.602	ENSMNEG00000031204	ADAR	89	46.039	Macaca_nemestrina
ENSDARG00000012389	adar	77	49.800	ENSMLEG00000029344	ADAR	99	50.363	Mandrillus_leucophaeus
ENSDARG00000012389	adar	98	57.030	ENSMAMG00000014398	adar	91	60.391	Mastacembelus_armatus
ENSDARG00000012389	adar	57	74.205	ENSMZEG00005015777	adar	93	58.089	Maylandia_zebra
ENSDARG00000012389	adar	61	57.726	ENSMGAG00000006645	ADAR	90	59.795	Meleagris_gallopavo
ENSDARG00000012389	adar	72	49.793	ENSMAUG00000015796	Adar	99	49.329	Mesocricetus_auratus
ENSDARG00000012389	adar	80	46.632	ENSMICG00000001431	ADAR	88	46.914	Microcebus_murinus
ENSDARG00000012389	adar	52	59.135	ENSMOCG00000018547	Adar	92	59.011	Microtus_ochrogaster
ENSDARG00000012389	adar	97	57.090	ENSMMOG00000003884	adar	99	68.698	Mola_mola
ENSDARG00000012389	adar	80	46.227	ENSMODG00000017160	ADAR	89	46.241	Monodelphis_domestica
ENSDARG00000012389	adar	97	54.961	ENSMALG00000020680	adar	98	55.405	Monopterus_albus
ENSDARG00000012389	adar	73	56.250	MGP_CAROLIEiJ_G0025215	Adar	93	61.148	Mus_caroli
ENSDARG00000012389	adar	73	56.250	ENSMUSG00000027951	Adar	93	61.148	Mus_musculus
ENSDARG00000012389	adar	79	46.355	MGP_PahariEiJ_G0026659	Adar	93	60.656	Mus_pahari
ENSDARG00000012389	adar	73	56.250	MGP_SPRETEiJ_G0026158	Adar	93	61.148	Mus_spretus
ENSDARG00000012389	adar	78	47.974	ENSMPUG00000007140	ADAR	85	47.938	Mustela_putorius_furo
ENSDARG00000012389	adar	79	46.861	ENSMLUG00000017678	ADAR	88	47.038	Myotis_lucifugus
ENSDARG00000012389	adar	79	47.202	ENSNGAG00000016696	Adar	88	46.512	Nannospalax_galili
ENSDARG00000012389	adar	99	56.232	ENSNBRG00000004510	adar	99	69.611	Neolamprologus_brichardi
ENSDARG00000012389	adar	80	46.174	ENSNLEG00000011458	ADAR	88	46.242	Nomascus_leucogenys
ENSDARG00000012389	adar	57	49.093	ENSMEUG00000012041	-	68	48.730	Notamacropus_eugenii
ENSDARG00000012389	adar	67	45.464	ENSOPRG00000000313	ADAR	85	45.364	Ochotona_princeps
ENSDARG00000012389	adar	80	46.848	ENSODEG00000011111	ADAR	89	47.106	Octodon_degus
ENSDARG00000012389	adar	98	58.146	ENSONIG00000006335	adar	99	57.910	Oreochromis_niloticus
ENSDARG00000012389	adar	80	46.878	ENSOCUG00000008544	ADAR	90	46.980	Oryctolagus_cuniculus
ENSDARG00000012389	adar	98	55.076	ENSORLG00000009955	adar	98	54.545	Oryzias_latipes
ENSDARG00000012389	adar	98	55.087	ENSORLG00020009688	adar	98	54.997	Oryzias_latipes_hni
ENSDARG00000012389	adar	98	55.633	ENSORLG00015015656	adar	98	55.136	Oryzias_latipes_hsok
ENSDARG00000012389	adar	90	57.674	ENSOMEG00000008019	adar	98	55.145	Oryzias_melastigma
ENSDARG00000012389	adar	80	46.410	ENSOGAG00000005587	ADAR	90	46.508	Otolemur_garnettii
ENSDARG00000012389	adar	79	46.384	ENSOARG00000002952	ADAR	88	46.140	Ovis_aries
ENSDARG00000012389	adar	76	51.509	ENSPPRG00000001779	ADAR	99	51.670	Panthera_pardus
ENSDARG00000012389	adar	50	87.302	ENSPTIG00000019964	-	73	44.493	Panthera_tigris_altaica
ENSDARG00000012389	adar	80	46.134	ENSPTRG00000022833	ADAR	88	46.290	Pan_troglodytes
ENSDARG00000012389	adar	78	49.404	ENSPANG00000008380	ADAR	89	46.100	Papio_anubis
ENSDARG00000012389	adar	97	54.355	ENSPKIG00000014435	adar	99	55.045	Paramormyrops_kingsleyae
ENSDARG00000012389	adar	55	53.359	ENSPSIG00000007571	ADAR	99	53.359	Pelodiscus_sinensis
ENSDARG00000012389	adar	97	57.670	ENSPMGG00000003925	adar	99	57.205	Periophthalmus_magnuspinnatus
ENSDARG00000012389	adar	72	50.519	ENSPEMG00000000814	Adar	96	61.047	Peromyscus_maniculatus_bairdii
ENSDARG00000012389	adar	79	48.079	ENSPCIG00000021738	ADAR	88	48.693	Phascolarctos_cinereus
ENSDARG00000012389	adar	97	55.145	ENSPFOG00000014636	adar	98	55.356	Poecilia_formosa
ENSDARG00000012389	adar	97	55.287	ENSPLAG00000022326	adar	98	55.603	Poecilia_latipinna
ENSDARG00000012389	adar	90	57.583	ENSPMEG00000007882	adar	98	55.252	Poecilia_mexicana
ENSDARG00000012389	adar	97	54.738	ENSPREG00000017446	adar	98	55.158	Poecilia_reticulata
ENSDARG00000012389	adar	80	46.181	ENSPPYG00000000776	ADAR	89	46.140	Pongo_abelii
ENSDARG00000012389	adar	78	54.299	ENSPCAG00000005550	ADAR	80	54.299	Procavia_capensis
ENSDARG00000012389	adar	80	46.520	ENSPCOG00000017300	ADAR	89	46.619	Propithecus_coquereli
ENSDARG00000012389	adar	79	66.811	ENSPVAG00000001256	ADAR	79	66.811	Pteropus_vampyrus
ENSDARG00000012389	adar	98	55.765	ENSPNYG00000004823	adar	93	58.264	Pundamilia_nyererei
ENSDARG00000012389	adar	97	65.328	ENSPNAG00000027353	adar	98	65.328	Pygocentrus_nattereri
ENSDARG00000012389	adar	78	46.422	ENSRNOG00000020744	Adar	87	46.237	Rattus_norvegicus
ENSDARG00000012389	adar	51	45.570	ENSRBIG00000040613	-	83	45.570	Rhinopithecus_bieti
ENSDARG00000012389	adar	80	46.638	ENSRROG00000033822	ADAR	89	46.275	Rhinopithecus_roxellana
ENSDARG00000012389	adar	80	46.880	ENSSBOG00000018272	ADAR	89	46.754	Saimiri_boliviensis_boliviensis
ENSDARG00000012389	adar	79	46.930	ENSSHAG00000014641	ADAR	89	46.935	Sarcophilus_harrisii
ENSDARG00000012389	adar	97	58.175	ENSSFOG00015021716	adar	99	58.035	Scleropages_formosus
ENSDARG00000012389	adar	97	56.519	ENSSMAG00000016465	adar	98	56.144	Scophthalmus_maximus
ENSDARG00000012389	adar	97	56.516	ENSSDUG00000006183	adar	90	59.195	Seriola_dumerili
ENSDARG00000012389	adar	97	56.838	ENSSLDG00000014208	adar	90	59.271	Seriola_lalandi_dorsalis
ENSDARG00000012389	adar	65	52.552	ENSSPUG00000002795	ADAR	99	52.896	Sphenodon_punctatus
ENSDARG00000012389	adar	97	56.008	ENSSPAG00000022397	adar	98	57.184	Stegastes_partitus
ENSDARG00000012389	adar	80	47.900	ENSSSCG00000006543	ADAR	88	48.219	Sus_scrofa
ENSDARG00000012389	adar	78	47.387	ENSTGUG00000004105	ADAR	99	47.500	Taeniopygia_guttata
ENSDARG00000012389	adar	97	55.111	ENSTRUG00000008870	adar	98	54.740	Takifugu_rubripes
ENSDARG00000012389	adar	84	73.946	ENSTNIG00000018320	adar	94	73.946	Tetraodon_nigroviridis
ENSDARG00000012389	adar	80	47.188	ENSTBEG00000013312	ADAR	85	47.491	Tupaia_belangeri
ENSDARG00000012389	adar	55	57.625	ENSTTRG00000014001	ADAR	57	57.453	Tursiops_truncatus
ENSDARG00000012389	adar	80	48.693	ENSUAMG00000014332	ADAR	88	49.083	Ursus_americanus
ENSDARG00000012389	adar	80	46.290	ENSUMAG00000019958	ADAR	88	46.631	Ursus_maritimus
ENSDARG00000012389	adar	52	76.170	ENSVPAG00000004789	-	50	76.170	Vicugna_pacos
ENSDARG00000012389	adar	78	46.858	ENSVVUG00000001831	ADAR	99	50.369	Vulpes_vulpes
ENSDARG00000012389	adar	67	54.065	ENSXETG00000003848	adar	92	49.140	Xenopus_tropicalis
ENSDARG00000012389	adar	90	58.537	ENSXCOG00000009420	adar	96	69.107	Xiphophorus_couchianus
ENSDARG00000012389	adar	90	57.680	ENSXMAG00000010557	adar	98	54.806	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	21873635.	IBA	Function
GO:0003726	double-stranded RNA adenosine deaminase activity	21873635.	IBA	Function
GO:0003726	double-stranded RNA adenosine deaminase activity	-	IEA	Function
GO:0004000	adenosine deaminase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006382	adenosine to inosine editing	21873635.	IBA	Process
GO:0006396	RNA processing	21873635.	IBA	Process
GO:0006396	RNA processing	-	IEA	Process
GO:0008251	tRNA-specific adenosine deaminase activity	21873635.	IBA	Function