EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000012403 (Gene tree)
Gene ID: 553504
Gene Symbol: ercc6l2
Alias: si:ch211-248d20.2
Full Name: excision repair cross-complementation group 6-like 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 32107 bases
Position: chr8:29898715-29930821
Accession: ZDB-GENE-110411-274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000109375	ResIII	PF04851.15	3.4e-10	1	1
ENSDARP00000109375	DEAD	PF00270.29	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000125173	-	4165	XM_009304064	ENSDARP00000109375	1269 (aa)	XP_009302339	F1QJP0

Gene Model

Click here to download ENSDARG00000012403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000012403	ercc6l2	90	64.956	ENSATEG00000016700	ercc6l2	78	69.622	Anabas_testudineus
ENSDARG00000012403	ercc6l2	76	56.188	ENSACLG00000015088	ercc6l2	95	55.844	Astatotilapia_calliptera
ENSDARG00000012403	ercc6l2	72	54.341	ENSCAFG00000001219	ERCC6L2	99	54.341	Canis_familiaris
ENSDARG00000012403	ercc6l2	71	67.615	ENSCPOG00000004544	-	90	65.967	Cavia_porcellus
ENSDARG00000012403	ercc6l2	84	67.802	ENSCPBG00000005414	ERCC6L2	54	67.802	Chrysemys_picta_bellii
ENSDARG00000012403	ercc6l2	54	59.857	ENSCGRG00000015854	Ercc6l2	81	60.320	Cricetulus_griseus_crigri
ENSDARG00000012403	ercc6l2	98	71.008	ENSELUG00000002272	ercc6l2	75	69.096	Esox_lucius
ENSDARG00000012403	ercc6l2	79	54.492	ENSFALG00000003400	ERCC6L2	93	54.492	Ficedula_albicollis
ENSDARG00000012403	ercc6l2	88	65.621	ENSFHEG00000017890	ercc6l2	75	65.621	Fundulus_heteroclitus
ENSDARG00000012403	ercc6l2	81	56.538	ENSGMOG00000007751	ercc6l2	97	56.606	Gadus_morhua
ENSDARG00000012403	ercc6l2	89	59.036	ENSGALG00000012621	ERCC6L2	54	59.887	Gallus_gallus
ENSDARG00000012403	ercc6l2	63	69.559	ENSGAFG00000012386	ercc6l2	54	69.559	Gambusia_affinis
ENSDARG00000012403	ercc6l2	84	57.143	ENSGACG00000006992	ercc6l2	99	57.143	Gasterosteus_aculeatus
ENSDARG00000012403	ercc6l2	73	67.802	ENSGAGG00000021675	ERCC6L2	60	67.802	Gopherus_agassizii
ENSDARG00000012403	ercc6l2	98	61.824	ENSIPUG00000000283	ercc6l2	99	61.556	Ictalurus_punctatus
ENSDARG00000012403	ercc6l2	89	67.962	ENSLBEG00000003016	ercc6l2	75	64.831	Labrus_bergylta
ENSDARG00000012403	ercc6l2	91	63.165	ENSLOCG00000009238	ercc6l2	65	63.165	Lepisosteus_oculatus
ENSDARG00000012403	ercc6l2	90	59.973	ENSMAUG00000004820	-	80	60.588	Mesocricetus_auratus
ENSDARG00000012403	ercc6l2	90	59.680	ENSMOCG00000019362	-	91	65.421	Microtus_ochrogaster
ENSDARG00000012403	ercc6l2	65	64.698	ENSMMOG00000001419	ercc6l2	72	63.807	Mola_mola
ENSDARG00000012403	ercc6l2	74	73.668	ENSMALG00000016933	ercc6l2	94	55.655	Monopterus_albus
ENSDARG00000012403	ercc6l2	53	61.119	MGP_PahariEiJ_G0019699	-	90	67.314	Mus_pahari
ENSDARG00000012403	ercc6l2	72	54.194	ENSMPUG00000006738	ERCC6L2	100	54.731	Mustela_putorius_furo
ENSDARG00000012403	ercc6l2	50	72.484	ENSONIG00000015139	ercc6l2	91	72.484	Oreochromis_niloticus
ENSDARG00000012403	ercc6l2	79	59.787	ENSOCUG00000000442	-	88	66.559	Oryctolagus_cuniculus
ENSDARG00000012403	ercc6l2	61	67.961	ENSORLG00000004287	ercc6l2	76	65.572	Oryzias_latipes
ENSDARG00000012403	ercc6l2	53	72.489	ENSORLG00020002133	ercc6l2	53	67.995	Oryzias_latipes_hni
ENSDARG00000012403	ercc6l2	53	71.176	ENSORLG00015010250	ercc6l2	70	65.834	Oryzias_latipes_hsok
ENSDARG00000012403	ercc6l2	99	50.036	ENSOMEG00000021983	ercc6l2	54	66.142	Oryzias_melastigma
ENSDARG00000012403	ercc6l2	72	55.117	ENSOGAG00000003146	ERCC6L2	99	55.378	Otolemur_garnettii
ENSDARG00000012403	ercc6l2	70	60.292	ENSOARG00000008546	ERCC6L2	75	59.894	Ovis_aries
ENSDARG00000012403	ercc6l2	87	68.813	ENSPKIG00000016799	ercc6l2	98	51.051	Paramormyrops_kingsleyae
ENSDARG00000012403	ercc6l2	50	67.030	ENSPSIG00000010627	ERCC6L2	94	67.030	Pelodiscus_sinensis
ENSDARG00000012403	ercc6l2	83	53.772	ENSPMGG00000016547	ercc6l2	100	51.935	Periophthalmus_magnuspinnatus
ENSDARG00000012403	ercc6l2	91	60.054	ENSPEMG00000006631	-	79	60.831	Peromyscus_maniculatus_bairdii
ENSDARG00000012403	ercc6l2	65	60.800	ENSPCIG00000020095	-	67	60.834	Phascolarctos_cinereus
ENSDARG00000012403	ercc6l2	68	64.610	ENSPFOG00000019333	ercc6l2	60	64.610	Poecilia_formosa
ENSDARG00000012403	ercc6l2	87	66.062	ENSPREG00000016702	ercc6l2	74	66.062	Poecilia_reticulata
ENSDARG00000012403	ercc6l2	72	58.968	ENSPPYG00000019412	-	57	60.425	Pongo_abelii
ENSDARG00000012403	ercc6l2	76	55.199	ENSPNYG00000015347	ercc6l2	95	54.767	Pundamilia_nyererei
ENSDARG00000012403	ercc6l2	98	62.041	ENSPNAG00000011413	ercc6l2	99	62.012	Pygocentrus_nattereri
ENSDARG00000012403	ercc6l2	71	66.102	ENSRNOG00000019175	Ercc6l2	59	66.102	Rattus_norvegicus
ENSDARG00000012403	ercc6l2	86	72.086	ENSSFOG00015006394	ercc6l2	55	72.086	Scleropages_formosus
ENSDARG00000012403	ercc6l2	80	67.239	ENSSLDG00000018663	ercc6l2	79	65.915	Seriola_lalandi_dorsalis
ENSDARG00000012403	ercc6l2	91	66.297	ENSSPUG00000004336	ERCC6L2	74	56.950	Sphenodon_punctatus
ENSDARG00000012403	ercc6l2	80	66.820	ENSSPAG00000004484	ercc6l2	73	67.874	Stegastes_partitus
ENSDARG00000012403	ercc6l2	62	63.930	ENSTRUG00000014634	ercc6l2	74	63.930	Takifugu_rubripes
ENSDARG00000012403	ercc6l2	79	53.425	ENSXETG00000014835	ercc6l2	94	53.771	Xenopus_tropicalis
ENSDARG00000012403	ercc6l2	78	68.384	ENSXMAG00000023695	ercc6l2	70	68.384	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function