EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000012446 (Gene tree)
Gene ID: 552926
Gene Symbol: zgc:113057
Alias: -
Full Name: zgc:113057
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 37931 bases
Position: chr7:9008372-9046302
Accession: ZDB-GENE-050508-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115109	RNB	PF00773.19	4.2e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000004476	-	1286	-	-	- (aa)	-	-
ENSDART00000163411	-	1222	-	ENSDARP00000136739	201 (aa)	-	A0A0R4IL89
ENSDART00000144897	-	4802	-	ENSDARP00000115109	1546 (aa)	-	F1QAI5

Gene Model

Click here to download ENSDARG00000012446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000012446	zgc:113057	96	37.658	ENSDARG00000012600	si:dkey-97a13.6	92	37.658
ENSDARG00000012446	zgc:113057	97	42.048	ENSDARG00000016527	helz2	67	42.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000012446	zgc:113057	97	35.264	ENSG00000130589	HELZ2	88	35.264	Homo_sapiens
ENSDARG00000012446	zgc:113057	97	33.867	ENSAMEG00000001622	HELZ2	65	33.930	Ailuropoda_melanoleuca
ENSDARG00000012446	zgc:113057	97	39.130	ENSAPLG00000010386	HELZ2	72	39.130	Anas_platyrhynchos
ENSDARG00000012446	zgc:113057	98	38.413	ENSACAG00000011519	HELZ2	70	38.413	Anolis_carolinensis
ENSDARG00000012446	zgc:113057	97	35.137	ENSANAG00000019546	HELZ2	70	35.388	Aotus_nancymaae
ENSDARG00000012446	zgc:113057	96	43.333	ENSAMXG00000017465	helz2	64	43.333	Astyanax_mexicanus
ENSDARG00000012446	zgc:113057	97	34.780	ENSCAFG00000012968	HELZ2	64	34.780	Canis_familiaris
ENSDARG00000012446	zgc:113057	97	34.785	ENSTSYG00000027453	HELZ2	69	34.915	Carlito_syrichta
ENSDARG00000012446	zgc:113057	97	35.272	ENSCAPG00000010249	HELZ2	64	35.335	Cavia_aperea
ENSDARG00000012446	zgc:113057	97	35.313	ENSCPOG00000006905	HELZ2	64	35.376	Cavia_porcellus
ENSDARG00000012446	zgc:113057	97	35.429	ENSCCAG00000027744	HELZ2	70	35.678	Cebus_capucinus
ENSDARG00000012446	zgc:113057	97	35.010	ENSCATG00000014259	HELZ2	69	33.821	Cercocebus_atys
ENSDARG00000012446	zgc:113057	98	34.428	ENSCLAG00000006292	HELZ2	63	34.470	Chinchilla_lanigera
ENSDARG00000012446	zgc:113057	97	34.921	ENSCSAG00000016417	HELZ2	65	34.921	Chlorocebus_sabaeus
ENSDARG00000012446	zgc:113057	97	39.467	ENSCPBG00000014633	HELZ2	66	39.467	Chrysemys_picta_bellii
ENSDARG00000012446	zgc:113057	97	35.133	ENSCANG00000033242	HELZ2	69	35.133	Colobus_angolensis_palliatus
ENSDARG00000012446	zgc:113057	97	33.060	ENSCGRG00001016744	Helz2	64	33.711	Cricetulus_griseus_chok1gshd
ENSDARG00000012446	zgc:113057	97	33.644	ENSCGRG00000012155	Helz2	64	33.623	Cricetulus_griseus_crigri
ENSDARG00000012446	zgc:113057	96	31.476	ENSDNOG00000017809	HELZ2	66	31.498	Dasypus_novemcinctus
ENSDARG00000012446	zgc:113057	97	34.306	ENSDORG00000005596	Helz2	64	34.513	Dipodomys_ordii
ENSDARG00000012446	zgc:113057	97	34.723	ENSEASG00005023168	HELZ2	63	34.728	Equus_asinus_asinus
ENSDARG00000012446	zgc:113057	97	34.365	ENSECAG00000013636	HELZ2	60	41.514	Equus_caballus
ENSDARG00000012446	zgc:113057	79	31.563	ENSEEUG00000004620	HELZ2	52	31.563	Erinaceus_europaeus
ENSDARG00000012446	zgc:113057	97	43.934	ENSELUG00000013322	helz2	70	43.934	Esox_lucius
ENSDARG00000012446	zgc:113057	97	39.034	ENSFALG00000005852	HELZ2	71	39.034	Ficedula_albicollis
ENSDARG00000012446	zgc:113057	98	34.576	ENSFDAG00000013078	HELZ2	65	34.576	Fukomys_damarensis
ENSDARG00000012446	zgc:113057	97	39.505	ENSGALG00000006138	HELZ2	66	39.505	Gallus_gallus
ENSDARG00000012446	zgc:113057	97	40.365	ENSGAGG00000019429	HELZ2	66	40.365	Gopherus_agassizii
ENSDARG00000012446	zgc:113057	97	34.909	ENSGGOG00000008640	HELZ2	88	34.586	Gorilla_gorilla
ENSDARG00000012446	zgc:113057	97	36.180	ENSHGLG00000013895	HELZ2	63	36.094	Heterocephalus_glaber_female
ENSDARG00000012446	zgc:113057	95	48.748	ENSHGLG00100002953	HELZ2	63	48.748	Heterocephalus_glaber_male
ENSDARG00000012446	zgc:113057	97	52.831	ENSIPUG00000017627	zgc:113057	100	52.831	Ictalurus_punctatus
ENSDARG00000012446	zgc:113057	97	35.050	ENSSTOG00000023572	HELZ2	64	35.220	Ictidomys_tridecemlineatus
ENSDARG00000012446	zgc:113057	97	34.603	ENSJJAG00000021775	Helz2	64	34.642	Jaculus_jaculus
ENSDARG00000012446	zgc:113057	96	36.888	ENSLACG00000008155	HELZ2	65	36.888	Latimeria_chalumnae
ENSDARG00000012446	zgc:113057	97	39.925	ENSLOCG00000001839	si:dkey-97a13.6	65	39.925	Lepisosteus_oculatus
ENSDARG00000012446	zgc:113057	97	59.604	ENSLOCG00000001770	helz2	63	59.604	Lepisosteus_oculatus
ENSDARG00000012446	zgc:113057	97	34.901	ENSMFAG00000002329	HELZ2	69	34.901	Macaca_fascicularis
ENSDARG00000012446	zgc:113057	97	35.048	ENSMMUG00000006070	HELZ2	69	35.003	Macaca_mulatta
ENSDARG00000012446	zgc:113057	97	34.813	ENSMNEG00000044829	HELZ2	65	34.813	Macaca_nemestrina
ENSDARG00000012446	zgc:113057	97	33.738	ENSMLEG00000034372	HELZ2	69	33.866	Mandrillus_leucophaeus
ENSDARG00000012446	zgc:113057	95	53.307	ENSMGAG00000006941	HELZ2	63	53.507	Meleagris_gallopavo
ENSDARG00000012446	zgc:113057	97	33.815	ENSMAUG00000000857	Helz2	64	33.815	Mesocricetus_auratus
ENSDARG00000012446	zgc:113057	97	32.663	ENSMICG00000027046	HELZ2	70	32.978	Microcebus_murinus
ENSDARG00000012446	zgc:113057	96	47.945	ENSMOCG00000016283	Helz2	62	47.945	Microtus_ochrogaster
ENSDARG00000012446	zgc:113057	97	37.304	ENSMODG00000016966	-	65	37.429	Monodelphis_domestica
ENSDARG00000012446	zgc:113057	95	49.595	MGP_CAROLIEiJ_G0024801	Helz2	61	49.595	Mus_caroli
ENSDARG00000012446	zgc:113057	97	48.491	ENSMUSG00000027580	Helz2	62	48.837	Mus_musculus
ENSDARG00000012446	zgc:113057	97	34.419	MGP_PahariEiJ_G0026249	Helz2	65	34.275	Mus_pahari
ENSDARG00000012446	zgc:113057	96	48.643	MGP_SPRETEiJ_G0025727	Helz2	62	48.643	Mus_spretus
ENSDARG00000012446	zgc:113057	98	34.485	ENSMPUG00000008361	HELZ2	64	34.485	Mustela_putorius_furo
ENSDARG00000012446	zgc:113057	97	34.145	ENSMLUG00000014588	HELZ2	65	34.145	Myotis_lucifugus
ENSDARG00000012446	zgc:113057	97	33.823	ENSNGAG00000013840	Helz2	65	33.823	Nannospalax_galili
ENSDARG00000012446	zgc:113057	97	33.907	ENSNLEG00000010083	-	69	33.907	Nomascus_leucogenys
ENSDARG00000012446	zgc:113057	92	52.553	ENSMEUG00000006147	HELZ2	66	52.553	Notamacropus_eugenii
ENSDARG00000012446	zgc:113057	97	34.016	ENSODEG00000007200	HELZ2	64	34.016	Octodon_degus
ENSDARG00000012446	zgc:113057	96	38.396	ENSOANG00000004941	-	92	38.396	Ornithorhynchus_anatinus
ENSDARG00000012446	zgc:113057	98	35.543	ENSOGAG00000031068	HELZ2	65	35.543	Otolemur_garnettii
ENSDARG00000012446	zgc:113057	97	35.013	ENSPPAG00000037593	HELZ2	88	34.728	Pan_paniscus
ENSDARG00000012446	zgc:113057	97	35.573	ENSPPRG00000012585	HELZ2	89	35.851	Panthera_pardus
ENSDARG00000012446	zgc:113057	96	34.860	ENSPTRG00000013743	HELZ2	87	34.703	Pan_troglodytes
ENSDARG00000012446	zgc:113057	97	34.791	ENSPANG00000020634	HELZ2	69	33.587	Papio_anubis
ENSDARG00000012446	zgc:113057	98	43.774	ENSPKIG00000005935	helz2	67	43.774	Paramormyrops_kingsleyae
ENSDARG00000012446	zgc:113057	96	53.216	ENSPSIG00000012565	HELZ2	67	53.216	Pelodiscus_sinensis
ENSDARG00000012446	zgc:113057	97	33.662	ENSPEMG00000016538	Helz2	65	33.725	Peromyscus_maniculatus_bairdii
ENSDARG00000012446	zgc:113057	97	37.586	ENSPCIG00000017966	HELZ2	73	37.586	Phascolarctos_cinereus
ENSDARG00000012446	zgc:113057	97	34.876	ENSPPYG00000011241	HELZ2	59	34.918	Pongo_abelii
ENSDARG00000012446	zgc:113057	96	33.919	ENSPCAG00000001068	HELZ2	80	33.961	Procavia_capensis
ENSDARG00000012446	zgc:113057	97	34.456	ENSPCOG00000017149	HELZ2	69	34.689	Propithecus_coquereli
ENSDARG00000012446	zgc:113057	74	51.585	ENSPVAG00000007183	HELZ2	61	51.585	Pteropus_vampyrus
ENSDARG00000012446	zgc:113057	96	43.051	ENSPNAG00000016859	helz2	60	43.051	Pygocentrus_nattereri
ENSDARG00000012446	zgc:113057	95	43.094	ENSRNOG00000013267	Helz2	56	43.094	Rattus_norvegicus
ENSDARG00000012446	zgc:113057	97	34.664	ENSRBIG00000044653	HELZ2	69	34.747	Rhinopithecus_bieti
ENSDARG00000012446	zgc:113057	97	34.854	ENSRROG00000009088	HELZ2	69	33.546	Rhinopithecus_roxellana
ENSDARG00000012446	zgc:113057	97	35.209	ENSSBOG00000033345	HELZ2	70	35.290	Saimiri_boliviensis_boliviensis
ENSDARG00000012446	zgc:113057	97	36.663	ENSSHAG00000018163	HELZ2	65	36.787	Sarcophilus_harrisii
ENSDARG00000012446	zgc:113057	97	40.641	ENSSFOG00015020580	helz2	65	40.641	Scleropages_formosus
ENSDARG00000012446	zgc:113057	67	37.969	ENSSPUG00000018590	-	98	37.969	Sphenodon_punctatus
ENSDARG00000012446	zgc:113057	96	34.355	ENSSSCG00000003306	HELZ2	65	34.355	Sus_scrofa
ENSDARG00000012446	zgc:113057	97	39.361	ENSTGUG00000006981	HELZ2	83	39.400	Taeniopygia_guttata
ENSDARG00000012446	zgc:113057	96	30.150	ENSUAMG00000025224	-	94	31.818	Ursus_americanus
ENSDARG00000012446	zgc:113057	96	35.045	ENSVVUG00000015158	HELZ2	61	35.045	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0004540	ribonuclease activity	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process
GO:0030374	nuclear receptor transcription coactivator activity	-	IEA	Function