EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000012505 (Gene tree)
Gene ID
557103
Gene Symbol
u2af2a
Alias
zgc:110115
Full Name
U2 small nuclear RNA auxiliary factor 2a
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
9555 bases
Position
chr16:12812214-12821768
Accession
ZDB-GENE-050706-131
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000002857TransformerPF06495.114.8e-0711
ENSDARP00000108138TransformerPF06495.114.9e-0711
ENSDARP00000002857RRM_1PF00076.221.3e-3513
ENSDARP00000002857RRM_1PF00076.221.3e-3523
ENSDARP00000002857RRM_1PF00076.221.3e-3533
ENSDARP00000108138RRM_1PF00076.221.4e-3513
ENSDARP00000108138RRM_1PF00076.221.4e-3523
ENSDARP00000108138RRM_1PF00076.221.4e-3533
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000124875-2106XM_005157895ENSDARP00000108138470 (aa)XP_005157952E7F8Y4
ENSDART00000008535-2791-ENSDARP00000002857465 (aa)-F1QVD2
Gene Model
Click here to download ENSDARG00000012505's gene model file
Pathways
Pathway IDPathway NameSource
dre03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012505's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000012505u2af2a6339.216ENSDARG00000001241puf60b9430.000
ENSDARG00000012505u2af2a10086.957ENSDARG00000011740u2af2b10085.062
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000012505u2af2a10085.447ENSG00000063244U2AF210093.506Homo_sapiens
ENSDARG00000012505u2af2a6791.975ENSAPOG00000023155u2af2a10091.975Acanthochromis_polyacanthus
ENSDARG00000012505u2af2a9973.617ENSAPOG00000002208-10072.281Acanthochromis_polyacanthus
ENSDARG00000012505u2af2a8088.410ENSAMEG00000003864U2AF28292.625Ailuropoda_melanoleuca
ENSDARG00000012505u2af2a9671.520ENSACIG00000014173-8379.231Amphilophus_citrinellus
ENSDARG00000012505u2af2a8296.859ENSACIG00000005749u2af2a9495.588Amphilophus_citrinellus
ENSDARG00000012505u2af2a9973.617ENSAOCG00000003595-10072.281Amphiprion_ocellaris
ENSDARG00000012505u2af2a9989.871ENSAOCG00000015571u2af2a10092.457Amphiprion_ocellaris
ENSDARG00000012505u2af2a9872.294ENSAPEG00000020062-8181.365Amphiprion_percula
ENSDARG00000012505u2af2a8297.120ENSAPEG00000009376u2af2a9097.120Amphiprion_percula
ENSDARG00000012505u2af2a10090.147ENSATEG00000022332u2af2a10089.286Anabas_testudineus
ENSDARG00000012505u2af2a9673.085ENSATEG00000020577-8381.627Anabas_testudineus
ENSDARG00000012505u2af2a10086.864ENSACAG00000015489U2AF210086.200Anolis_carolinensis
ENSDARG00000012505u2af2a10083.424ENSANAG00000028042U2AF210083.889Aotus_nancymaae
ENSDARG00000012505u2af2a9973.617ENSACLG00000020793-10072.281Astatotilapia_calliptera
ENSDARG00000012505u2af2a10089.619ENSACLG00000022181u2af2a9495.588Astatotilapia_calliptera
ENSDARG00000012505u2af2a10093.658ENSAMXG00000033347u2af2a10093.869Astyanax_mexicanus
ENSDARG00000012505u2af2a9988.578ENSAMXG00000039454u2af2b9989.655Astyanax_mexicanus
ENSDARG00000012505u2af2a10088.387ENSBTAG00000002830U2AF210087.312Bos_taurus
ENSDARG00000012505u2af2a8757.457WBGene00006697uaf-110053.020Caenorhabditis_elegans
ENSDARG00000012505u2af2a10084.742ENSCJAG00000017128U2AF210085.115Callithrix_jacchus
ENSDARG00000012505u2af2a10085.447ENSCAFG00000002551U2AF210085.835Canis_familiaris
ENSDARG00000012505u2af2a8592.519ENSCAFG00020015445U2AF28193.264Canis_lupus_dingo
ENSDARG00000012505u2af2a8677.340ENSCHIG00000023595U2AF28477.749Capra_hircus
ENSDARG00000012505u2af2a10084.742ENSTSYG00000007432U2AF210085.115Carlito_syrichta
ENSDARG00000012505u2af2a8989.474ENSCAPG00000008466U2AF28493.264Cavia_aperea
ENSDARG00000012505u2af2a10084.742ENSCPOG00000001582U2AF210085.115Cavia_porcellus
ENSDARG00000012505u2af2a10084.742ENSCCAG00000023336U2AF210085.115Cebus_capucinus
ENSDARG00000012505u2af2a10085.447ENSCATG00000004637U2AF210085.835Cercocebus_atys
ENSDARG00000012505u2af2a10085.447ENSCLAG00000000596U2AF210085.835Chinchilla_lanigera
ENSDARG00000012505u2af2a10085.447ENSCSAG00000001722U2AF210085.835Chlorocebus_sabaeus
ENSDARG00000012505u2af2a8590.750ENSCPBG00000004485U2AF210093.506Chrysemys_picta_bellii
ENSDARG00000012505u2af2a8469.565ENSCING00000003455-7869.895Ciona_intestinalis
ENSDARG00000012505u2af2a8468.286ENSCSAVG00000006813-9064.218Ciona_savignyi
ENSDARG00000012505u2af2a9184.475ENSCANG00000031002-9684.884Colobus_angolensis_palliatus
ENSDARG00000012505u2af2a10079.915ENSCANG00000043845-10078.814Colobus_angolensis_palliatus
ENSDARG00000012505u2af2a10088.602ENSCGRG00001003185-10087.527Cricetulus_griseus_chok1gshd
ENSDARG00000012505u2af2a9977.871ENSCGRG00001007486-9975.732Cricetulus_griseus_chok1gshd
ENSDARG00000012505u2af2a9977.871ENSCGRG00000018587-9975.732Cricetulus_griseus_crigri
ENSDARG00000012505u2af2a5091.775ENSCGRG00000004524-7987.755Cricetulus_griseus_crigri
ENSDARG00000012505u2af2a9082.888ENSCSEG00000018709u2af2a9594.304Cynoglossus_semilaevis
ENSDARG00000012505u2af2a9969.807ENSCSEG00000020504-9469.807Cynoglossus_semilaevis
ENSDARG00000012505u2af2a10089.407ENSCVAG00000001259u2af2a10092.043Cyprinodon_variegatus
ENSDARG00000012505u2af2a9972.921ENSCVAG00000023307-10072.281Cyprinodon_variegatus
ENSDARG00000012505u2af2a9184.475ENSDNOG00000047039U2AF29684.884Dasypus_novemcinctus
ENSDARG00000012505u2af2a10084.742ENSDORG00000003250U2af210085.115Dipodomys_ordii
ENSDARG00000012505u2af2a8271.429FBgn0005411U2af5010070.350Drosophila_melanogaster
ENSDARG00000012505u2af2a8650.704FBgn0034834LS28553.283Drosophila_melanogaster
ENSDARG00000012505u2af2a9073.095ENSEBUG00000010917U2AF28476.378Eptatretus_burgeri
ENSDARG00000012505u2af2a8262.895ENSEBUG00000001732U2AF28462.992Eptatretus_burgeri
ENSDARG00000012505u2af2a8691.832ENSEASG00005020708U2AF27693.264Equus_asinus_asinus
ENSDARG00000012505u2af2a10088.602ENSECAG00000010110U2AF210087.527Equus_caballus
ENSDARG00000012505u2af2a9970.339ENSELUG00000018459-10070.576Esox_lucius
ENSDARG00000012505u2af2a10086.752ENSELUG00000022291u2af2b10082.906Esox_lucius
ENSDARG00000012505u2af2a10088.935ENSELUG00000015850u2af2a10088.223Esox_lucius
ENSDARG00000012505u2af2a10084.742ENSFCAG00000011504U2AF210085.115Felis_catus
ENSDARG00000012505u2af2a8989.474ENSFDAG00000011264U2AF28193.264Fukomys_damarensis
ENSDARG00000012505u2af2a10089.247ENSFHEG00000016025u2af2a10092.043Fundulus_heteroclitus
ENSDARG00000012505u2af2a10090.108ENSGMOG00000004535u2af2a10091.435Gadus_morhua
ENSDARG00000012505u2af2a9886.304ENSGALG00000052748U2AF26585.621Gallus_gallus
ENSDARG00000012505u2af2a9973.118ENSGAFG00000005628-10073.276Gambusia_affinis
ENSDARG00000012505u2af2a10089.407ENSGAFG00000013626u2af2a8892.043Gambusia_affinis
ENSDARG00000012505u2af2a9971.757ENSGACG00000014500-10071.097Gasterosteus_aculeatus
ENSDARG00000012505u2af2a10093.548ENSGACG00000010632U2AF210093.548Gasterosteus_aculeatus
ENSDARG00000012505u2af2a6693.506ENSGAGG00000011849U2AF210093.506Gopherus_agassizii
ENSDARG00000012505u2af2a5581.783ENSGGOG00000036399-8990.830Gorilla_gorilla
ENSDARG00000012505u2af2a10089.619ENSHBUG00000013935u2af2a9495.588Haplochromis_burtoni
ENSDARG00000012505u2af2a9973.617ENSHBUG00000017424-10072.281Haplochromis_burtoni
ENSDARG00000012505u2af2a10084.742ENSHGLG00000005889U2AF210085.115Heterocephalus_glaber_female
ENSDARG00000012505u2af2a8989.474ENSHGLG00100004757U2AF28493.264Heterocephalus_glaber_male
ENSDARG00000012505u2af2a10091.720ENSHCOG00000019367u2af2a10092.144Hippocampus_comes
ENSDARG00000012505u2af2a9972.198ENSIPUG00000009844-10069.612Ictalurus_punctatus
ENSDARG00000012505u2af2a9989.574ENSIPUG00000009077u2af29988.936Ictalurus_punctatus
ENSDARG00000012505u2af2a10094.409ENSIPUG00000007717u2af2a10093.763Ictalurus_punctatus
ENSDARG00000012505u2af2a10084.742ENSSTOG00000019595U2AF210085.115Ictidomys_tridecemlineatus
ENSDARG00000012505u2af2a10084.742ENSJJAG00000017705U2af210085.115Jaculus_jaculus
ENSDARG00000012505u2af2a10089.518ENSKMAG00000005960u2af2a10091.946Kryptolebias_marmoratus
ENSDARG00000012505u2af2a10090.356ENSLBEG00000016162u2af2a10092.473Labrus_bergylta
ENSDARG00000012505u2af2a9770.513ENSLBEG00000005001-8378.718Labrus_bergylta
ENSDARG00000012505u2af2a7993.750ENSLACG00000001648U2AF210093.750Latimeria_chalumnae
ENSDARG00000012505u2af2a6095.307ENSLOCG00000008050u2af2b9386.405Lepisosteus_oculatus
ENSDARG00000012505u2af2a9972.458ENSLOCG00000010843-10073.348Lepisosteus_oculatus
ENSDARG00000012505u2af2a10086.709ENSLAFG00000018056-10086.526Loxodonta_africana
ENSDARG00000012505u2af2a10076.632ENSLAFG00000028496-10075.053Loxodonta_africana
ENSDARG00000012505u2af2a10084.742ENSMFAG00000038383U2AF210085.115Macaca_fascicularis
ENSDARG00000012505u2af2a10084.536ENSMMUG00000004810U2AF210084.906Macaca_mulatta
ENSDARG00000012505u2af2a10085.447ENSMNEG00000042096U2AF210085.835Macaca_nemestrina
ENSDARG00000012505u2af2a8990.338ENSMLEG00000032219U2AF27494.241Mandrillus_leucophaeus
ENSDARG00000012505u2af2a10091.720ENSMAMG00000019817u2af2a10091.295Mastacembelus_armatus
ENSDARG00000012505u2af2a9972.128ENSMAMG00000020158-10070.789Mastacembelus_armatus
ENSDARG00000012505u2af2a10089.677ENSMZEG00005016563u2af2a10092.258Maylandia_zebra
ENSDARG00000012505u2af2a9973.617ENSMZEG00005023318-10072.281Maylandia_zebra
ENSDARG00000012505u2af2a8989.474ENSMAUG00000008180U2af28293.264Mesocricetus_auratus
ENSDARG00000012505u2af2a10085.447ENSMICG00000027681U2AF210085.835Microcebus_murinus
ENSDARG00000012505u2af2a6690.584ENSMOCG00000001018-10090.584Microtus_ochrogaster
ENSDARG00000012505u2af2a10084.742ENSMOCG00000013214-10085.115Microtus_ochrogaster
ENSDARG00000012505u2af2a10078.616ENSMOCG00000007227-10077.825Microtus_ochrogaster
ENSDARG00000012505u2af2a9595.455ENSMMOG00000016600u2af2a10095.455Mola_mola
ENSDARG00000012505u2af2a9967.364ENSMMOG00000000531-10066.946Mola_mola
ENSDARG00000012505u2af2a10092.043ENSMALG00000009985u2af2a10091.613Monopterus_albus
ENSDARG00000012505u2af2a10085.447MGP_CAROLIEiJ_G0029150U2af210085.835Mus_caroli
ENSDARG00000012505u2af2a10085.447ENSMUSG00000030435U2af210093.506Mus_musculus
ENSDARG00000012505u2af2a10085.447MGP_PahariEiJ_G0021017U2af210085.835Mus_pahari
ENSDARG00000012505u2af2a10085.447MGP_SPRETEiJ_G0030203U2af210085.835Mus_spretus
ENSDARG00000012505u2af2a10085.447ENSMPUG00000007135U2AF210085.835Mustela_putorius_furo
ENSDARG00000012505u2af2a5186.364ENSMLUG00000011051-10086.364Myotis_lucifugus
ENSDARG00000012505u2af2a10084.536ENSNGAG00000020369U2af210085.115Nannospalax_galili
ENSDARG00000012505u2af2a9671.459ENSNBRG00000011100-8379.487Neolamprologus_brichardi
ENSDARG00000012505u2af2a10089.619ENSNBRG00000002568u2af2a9495.588Neolamprologus_brichardi
ENSDARG00000012505u2af2a10074.735ENSNLEG00000010562U2AF210093.506Nomascus_leucogenys
ENSDARG00000012505u2af2a8578.680ENSMEUG00000002346U2AF28479.319Notamacropus_eugenii
ENSDARG00000012505u2af2a9964.286ENSODEG00000009254-8472.312Octodon_degus
ENSDARG00000012505u2af2a10079.794ENSODEG00000012729-10080.084Octodon_degus
ENSDARG00000012505u2af2a10089.474ENSONIG00000012793u2af2a10088.727Oreochromis_niloticus
ENSDARG00000012505u2af2a9973.617ENSONIG00000009682-10072.281Oreochromis_niloticus
ENSDARG00000012505u2af2a10089.937ENSORLG00000011545u2af2a10087.185Oryzias_latipes
ENSDARG00000012505u2af2a10089.937ENSORLG00020006941u2af2a10087.185Oryzias_latipes_hni
ENSDARG00000012505u2af2a10089.937ENSORLG00015012843u2af2a10087.185Oryzias_latipes_hsok
ENSDARG00000012505u2af2a10089.099ENSOMEG00000011386u2af2a9394.853Oryzias_melastigma
ENSDARG00000012505u2af2a9654.565ENSOGAG00000034729-8061.662Otolemur_garnettii
ENSDARG00000012505u2af2a10084.742ENSOGAG00000007206-10085.115Otolemur_garnettii
ENSDARG00000012505u2af2a10077.778ENSOARG00000001091U2AF210077.453Ovis_aries
ENSDARG00000012505u2af2a10084.742ENSPPAG00000039782U2AF210085.115Pan_paniscus
ENSDARG00000012505u2af2a10084.742ENSPPRG00000013843U2AF210085.115Panthera_pardus
ENSDARG00000012505u2af2a9977.101ENSPTIG00000005489U2AF28488.114Panthera_tigris_altaica
ENSDARG00000012505u2af2a10084.742ENSPTRG00000011523U2AF210093.506Pan_troglodytes
ENSDARG00000012505u2af2a10085.447ENSPANG00000008459U2AF210085.835Papio_anubis
ENSDARG00000012505u2af2a9971.698ENSPKIG00000014878-10071.429Paramormyrops_kingsleyae
ENSDARG00000012505u2af2a10087.686ENSPKIG00000024346u2af2b8895.550Paramormyrops_kingsleyae
ENSDARG00000012505u2af2a8671.292ENSPSIG00000008014U2AF28472.111Pelodiscus_sinensis
ENSDARG00000012505u2af2a8288.265ENSPMGG00000022980u2af2a10085.339Periophthalmus_magnuspinnatus
ENSDARG00000012505u2af2a10084.742ENSPEMG00000007378U2af210093.506Peromyscus_maniculatus_bairdii
ENSDARG00000012505u2af2a8277.121ENSPMAG00000004097u2af2a8478.238Petromyzon_marinus
ENSDARG00000012505u2af2a10084.330ENSPCIG00000018013U2AF210084.906Phascolarctos_cinereus
ENSDARG00000012505u2af2a9973.978ENSPFOG00000006433-10073.276Poecilia_formosa
ENSDARG00000012505u2af2a9989.384ENSPFOG00000010799u2af2a10089.053Poecilia_formosa
ENSDARG00000012505u2af2a8679.397ENSPLAG00000003275-8480.577Poecilia_latipinna
ENSDARG00000012505u2af2a10089.407ENSPLAG00000014365u2af2a10092.043Poecilia_latipinna
ENSDARG00000012505u2af2a8679.146ENSPMEG00000003734-8480.315Poecilia_mexicana
ENSDARG00000012505u2af2a10089.407ENSPMEG00000002969u2af2a10092.043Poecilia_mexicana
ENSDARG00000012505u2af2a10089.407ENSPREG00000008739u2af2a10092.394Poecilia_reticulata
ENSDARG00000012505u2af2a9972.766ENSPREG00000013036-10071.141Poecilia_reticulata
ENSDARG00000012505u2af2a5890.909ENSPPYG00000010429-7890.288Pongo_abelii
ENSDARG00000012505u2af2a8578.173ENSPCAG00000003709-9379.265Procavia_capensis
ENSDARG00000012505u2af2a10069.136ENSPCAG00000014399-10069.247Procavia_capensis
ENSDARG00000012505u2af2a10084.742ENSPCOG00000025870U2AF210085.115Propithecus_coquereli
ENSDARG00000012505u2af2a10084.330ENSPVAG00000004540U2AF210084.696Pteropus_vampyrus
ENSDARG00000012505u2af2a9973.617ENSPNYG00000011605-10072.281Pundamilia_nyererei
ENSDARG00000012505u2af2a10089.619ENSPNYG00000001438u2af2a9495.588Pundamilia_nyererei
ENSDARG00000012505u2af2a9972.824ENSPNAG00000007182-10073.461Pygocentrus_nattereri
ENSDARG00000012505u2af2a9989.440ENSPNAG00000027289u2af2b9990.086Pygocentrus_nattereri
ENSDARG00000012505u2af2a10097.204ENSPNAG00000017620u2af2a10097.204Pygocentrus_nattereri
ENSDARG00000012505u2af2a10085.447ENSRNOG00000015914U2af210085.835Rattus_norvegicus
ENSDARG00000012505u2af2a10084.536ENSRBIG00000041018U2AF210084.906Rhinopithecus_bieti
ENSDARG00000012505u2af2a10080.457ENSRROG00000031238-10080.761Rhinopithecus_roxellana
ENSDARG00000012505u2af2a8089.037ENSRROG00000031103-8293.275Rhinopithecus_roxellana
ENSDARG00000012505u2af2a10085.447ENSSBOG00000023891U2AF210085.835Saimiri_boliviensis_boliviensis
ENSDARG00000012505u2af2a5280.488ENSSHAG00000001167U2AF26281.919Sarcophilus_harrisii
ENSDARG00000012505u2af2a8694.500ENSSFOG00015019182u2af2b8695.288Scleropages_formosus
ENSDARG00000012505u2af2a9973.573ENSSFOG00015003884-9180.840Scleropages_formosus
ENSDARG00000012505u2af2a10092.473ENSSMAG00000012582u2af2a10091.828Scophthalmus_maximus
ENSDARG00000012505u2af2a9972.979ENSSMAG00000013779-10071.429Scophthalmus_maximus
ENSDARG00000012505u2af2a9989.655ENSSDUG00000009457u2af2a10092.241Seriola_dumerili
ENSDARG00000012505u2af2a9670.789ENSSDUG00000021434-7979.082Seriola_dumerili
ENSDARG00000012505u2af2a10089.677ENSSLDG00000022742u2af2a10092.258Seriola_lalandi_dorsalis
ENSDARG00000012505u2af2a9671.154ENSSLDG00000016151-8379.082Seriola_lalandi_dorsalis
ENSDARG00000012505u2af2a10085.535ENSSPUG00000010229U2AF210084.664Sphenodon_punctatus
ENSDARG00000012505u2af2a10089.831ENSSPAG00000022519u2af2a10089.496Stegastes_partitus
ENSDARG00000012505u2af2a9973.830ENSSPAG00000005241-10072.495Stegastes_partitus
ENSDARG00000012505u2af2a10088.602ENSSSCG00000034815U2AF210087.527Sus_scrofa
ENSDARG00000012505u2af2a9787.528ENSTRUG00000005514u2af2a9990.423Takifugu_rubripes
ENSDARG00000012505u2af2a8678.195ENSTNIG00000011257-10071.613Tetraodon_nigroviridis
ENSDARG00000012505u2af2a10090.546ENSTNIG00000008106U2AF210089.474Tetraodon_nigroviridis
ENSDARG00000012505u2af2a8084.800ENSTBEG00000009104U2AF29288.630Tupaia_belangeri
ENSDARG00000012505u2af2a10084.742ENSTTRG00000000987U2AF210085.115Tursiops_truncatus
ENSDARG00000012505u2af2a8592.500ENSUAMG00000019883U2AF28593.264Ursus_americanus
ENSDARG00000012505u2af2a8592.500ENSUMAG00000024586U2AF210093.506Ursus_maritimus
ENSDARG00000012505u2af2a8990.338ENSVVUG00000006956U2AF25794.241Vulpes_vulpes
ENSDARG00000012505u2af2a10085.654ENSXETG00000019128u2af210085.443Xenopus_tropicalis
ENSDARG00000012505u2af2a8296.859ENSXCOG00000019406u2af2a10092.377Xiphophorus_couchianus
ENSDARG00000012505u2af2a9972.553ENSXMAG00000000768-9672.187Xiphophorus_maculatus
ENSDARG00000012505u2af2a10089.407ENSXMAG00000011979u2af2a10092.043Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000243commitment complex21873635.IBAComponent
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0006397mRNA processing-IEAProcess
GO:0008187poly-pyrimidine tract binding21873635.IBAFunction
GO:0008380RNA splicing-IEAProcess
GO:0016607nuclear speck21873635.IBAComponent
GO:0030628pre-mRNA 3'-splice site binding21873635.IBAFunction
GO:0046660female sex differentiation-IEAProcess
GO:0071004U2-type prespliceosome21873635.IBAComponent
GO:0089701U2AF21873635.IBAComponent

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