EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000012600 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-97a13.6
Alias: -
Full Name: si:dkey-97a13.6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 15217 bases
Position: chr2:41949186-41964402
Accession: ZDB-GENE-070912-617
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000122617	RNB	PF00773.19	2.6e-63	1	2
ENSDARP00000122617	RNB	PF00773.19	2.6e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000131278	-	6814	XM_694159	ENSDARP00000122617	2190 (aa)	XP_699251	F1QV93

Gene Model

Click here to download ENSDARG00000012600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000012600	si:dkey-97a13.6	92	37.658	ENSDARG00000012446	zgc:113057	96	37.658
ENSDARG00000012600	si:dkey-97a13.6	99	43.379	ENSDARG00000016527	helz2	74	45.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000012600	si:dkey-97a13.6	96	46.803	ENSG00000130589	HELZ2	92	46.803	Homo_sapiens
ENSDARG00000012600	si:dkey-97a13.6	99	37.168	ENSAMEG00000001622	HELZ2	72	37.168	Ailuropoda_melanoleuca
ENSDARG00000012600	si:dkey-97a13.6	98	42.781	ENSAPLG00000010386	HELZ2	77	42.781	Anas_platyrhynchos
ENSDARG00000012600	si:dkey-97a13.6	99	42.105	ENSACAG00000011519	HELZ2	71	42.105	Anolis_carolinensis
ENSDARG00000012600	si:dkey-97a13.6	96	45.269	ENSANAG00000019546	HELZ2	73	45.269	Aotus_nancymaae
ENSDARG00000012600	si:dkey-97a13.6	99	46.531	ENSAMXG00000017465	helz2	70	46.638	Astyanax_mexicanus
ENSDARG00000012600	si:dkey-97a13.6	98	46.803	ENSCAFG00000012968	HELZ2	69	43.182	Canis_familiaris
ENSDARG00000012600	si:dkey-97a13.6	96	45.041	ENSTSYG00000027453	HELZ2	76	44.867	Carlito_syrichta
ENSDARG00000012600	si:dkey-97a13.6	98	36.989	ENSCAPG00000010249	HELZ2	71	36.989	Cavia_aperea
ENSDARG00000012600	si:dkey-97a13.6	98	36.914	ENSCPOG00000006905	HELZ2	71	36.914	Cavia_porcellus
ENSDARG00000012600	si:dkey-97a13.6	97	43.961	ENSCCAG00000027744	HELZ2	77	39.759	Cebus_capucinus
ENSDARG00000012600	si:dkey-97a13.6	96	47.570	ENSCATG00000014259	HELZ2	73	47.570	Cercocebus_atys
ENSDARG00000012600	si:dkey-97a13.6	97	47.545	ENSCLAG00000006292	HELZ2	66	47.545	Chinchilla_lanigera
ENSDARG00000012600	si:dkey-97a13.6	96	47.804	ENSCSAG00000016417	HELZ2	68	47.804	Chlorocebus_sabaeus
ENSDARG00000012600	si:dkey-97a13.6	98	44.176	ENSCPBG00000014633	HELZ2	71	44.176	Chrysemys_picta_bellii
ENSDARG00000012600	si:dkey-97a13.6	96	46.547	ENSCANG00000033242	HELZ2	73	46.547	Colobus_angolensis_palliatus
ENSDARG00000012600	si:dkey-97a13.6	99	36.689	ENSCGRG00001016744	Helz2	72	36.761	Cricetulus_griseus_chok1gshd
ENSDARG00000012600	si:dkey-97a13.6	99	36.701	ENSCGRG00000012155	Helz2	72	36.773	Cricetulus_griseus_crigri
ENSDARG00000012600	si:dkey-97a13.6	90	45.038	ENSDNOG00000017809	HELZ2	70	45.038	Dasypus_novemcinctus
ENSDARG00000012600	si:dkey-97a13.6	99	36.610	ENSDORG00000005596	Helz2	71	36.610	Dipodomys_ordii
ENSDARG00000012600	si:dkey-97a13.6	60	55.882	ENSETEG00000009947	-	52	55.882	Echinops_telfairi
ENSDARG00000012600	si:dkey-97a13.6	99	45.388	ENSEASG00005023168	HELZ2	67	45.388	Equus_asinus_asinus
ENSDARG00000012600	si:dkey-97a13.6	99	45.146	ENSECAG00000013636	HELZ2	67	45.146	Equus_caballus
ENSDARG00000012600	si:dkey-97a13.6	82	38.312	ENSEEUG00000004620	HELZ2	64	38.312	Erinaceus_europaeus
ENSDARG00000012600	si:dkey-97a13.6	98	47.996	ENSELUG00000013322	helz2	71	47.996	Esox_lucius
ENSDARG00000012600	si:dkey-97a13.6	99	41.966	ENSFALG00000005852	HELZ2	71	42.283	Ficedula_albicollis
ENSDARG00000012600	si:dkey-97a13.6	99	36.062	ENSFDAG00000013078	HELZ2	72	36.062	Fukomys_damarensis
ENSDARG00000012600	si:dkey-97a13.6	99	42.887	ENSGALG00000006138	HELZ2	71	42.887	Gallus_gallus
ENSDARG00000012600	si:dkey-97a13.6	98	44.690	ENSGAGG00000019429	HELZ2	71	44.479	Gopherus_agassizii
ENSDARG00000012600	si:dkey-97a13.6	96	46.547	ENSGGOG00000008640	HELZ2	92	46.547	Gorilla_gorilla
ENSDARG00000012600	si:dkey-97a13.6	97	46.512	ENSHGLG00000013895	HELZ2	66	46.512	Heterocephalus_glaber_female
ENSDARG00000012600	si:dkey-97a13.6	98	48.633	ENSHGLG00100002953	HELZ2	70	48.633	Heterocephalus_glaber_male
ENSDARG00000012600	si:dkey-97a13.6	93	35.729	ENSIPUG00000017627	zgc:113057	99	35.729	Ictalurus_punctatus
ENSDARG00000012600	si:dkey-97a13.6	99	36.416	ENSSTOG00000023572	HELZ2	71	36.344	Ictidomys_tridecemlineatus
ENSDARG00000012600	si:dkey-97a13.6	99	36.823	ENSJJAG00000021775	Helz2	72	36.873	Jaculus_jaculus
ENSDARG00000012600	si:dkey-97a13.6	99	42.887	ENSLACG00000008155	HELZ2	72	42.887	Latimeria_chalumnae
ENSDARG00000012600	si:dkey-97a13.6	99	50.323	ENSLOCG00000001839	si:dkey-97a13.6	70	50.323	Lepisosteus_oculatus
ENSDARG00000012600	si:dkey-97a13.6	97	58.103	ENSLOCG00000001770	helz2	69	58.103	Lepisosteus_oculatus
ENSDARG00000012600	si:dkey-97a13.6	96	47.315	ENSMFAG00000002329	HELZ2	73	47.315	Macaca_fascicularis
ENSDARG00000012600	si:dkey-97a13.6	96	47.704	ENSMMUG00000006070	HELZ2	73	47.704	Macaca_mulatta
ENSDARG00000012600	si:dkey-97a13.6	97	47.315	ENSMNEG00000044829	HELZ2	69	47.315	Macaca_nemestrina
ENSDARG00000012600	si:dkey-97a13.6	96	47.315	ENSMLEG00000034372	HELZ2	72	47.315	Mandrillus_leucophaeus
ENSDARG00000012600	si:dkey-97a13.6	98	52.475	ENSMGAG00000006941	HELZ2	68	52.475	Meleagris_gallopavo
ENSDARG00000012600	si:dkey-97a13.6	99	37.225	ENSMAUG00000000857	Helz2	71	37.298	Mesocricetus_auratus
ENSDARG00000012600	si:dkey-97a13.6	97	46.632	ENSMICG00000027046	HELZ2	72	46.632	Microcebus_murinus
ENSDARG00000012600	si:dkey-97a13.6	97	45.995	ENSMOCG00000016283	Helz2	68	45.995	Microtus_ochrogaster
ENSDARG00000012600	si:dkey-97a13.6	99	40.706	ENSMODG00000016966	-	71	40.706	Monodelphis_domestica
ENSDARG00000012600	si:dkey-97a13.6	98	50.701	MGP_CAROLIEiJ_G0024801	Helz2	66	50.595	Mus_caroli
ENSDARG00000012600	si:dkey-97a13.6	98	50.902	ENSMUSG00000027580	Helz2	66	50.794	Mus_musculus
ENSDARG00000012600	si:dkey-97a13.6	99	46.392	MGP_PahariEiJ_G0026249	Helz2	72	36.238	Mus_pahari
ENSDARG00000012600	si:dkey-97a13.6	96	50.902	MGP_SPRETEiJ_G0025727	Helz2	66	50.794	Mus_spretus
ENSDARG00000012600	si:dkey-97a13.6	99	40.878	ENSMPUG00000008361	HELZ2	69	39.140	Mustela_putorius_furo
ENSDARG00000012600	si:dkey-97a13.6	99	36.905	ENSMLUG00000014588	HELZ2	72	37.202	Myotis_lucifugus
ENSDARG00000012600	si:dkey-97a13.6	96	46.770	ENSNGAG00000013840	Helz2	67	46.770	Nannospalax_galili
ENSDARG00000012600	si:dkey-97a13.6	96	47.028	ENSNLEG00000010083	-	73	47.028	Nomascus_leucogenys
ENSDARG00000012600	si:dkey-97a13.6	95	57.143	ENSMEUG00000006147	HELZ2	73	57.143	Notamacropus_eugenii
ENSDARG00000012600	si:dkey-97a13.6	99	47.028	ENSODEG00000007200	HELZ2	68	47.028	Octodon_degus
ENSDARG00000012600	si:dkey-97a13.6	98	41.684	ENSOANG00000004941	-	99	41.789	Ornithorhynchus_anatinus
ENSDARG00000012600	si:dkey-97a13.6	99	36.638	ENSOGAG00000031068	HELZ2	72	36.638	Otolemur_garnettii
ENSDARG00000012600	si:dkey-97a13.6	96	46.803	ENSPPAG00000037593	HELZ2	92	46.803	Pan_paniscus
ENSDARG00000012600	si:dkey-97a13.6	97	46.632	ENSPPRG00000012585	HELZ2	93	46.632	Panthera_pardus
ENSDARG00000012600	si:dkey-97a13.6	95	46.803	ENSPTRG00000013743	HELZ2	91	46.803	Pan_troglodytes
ENSDARG00000012600	si:dkey-97a13.6	96	47.059	ENSPANG00000020634	HELZ2	73	47.059	Papio_anubis
ENSDARG00000012600	si:dkey-97a13.6	99	51.509	ENSPKIG00000005935	helz2	73	51.509	Paramormyrops_kingsleyae
ENSDARG00000012600	si:dkey-97a13.6	94	43.359	ENSPSIG00000012565	HELZ2	74	42.977	Pelodiscus_sinensis
ENSDARG00000012600	si:dkey-97a13.6	98	37.376	ENSPEMG00000016538	Helz2	72	37.376	Peromyscus_maniculatus_bairdii
ENSDARG00000012600	si:dkey-97a13.6	99	40.464	ENSPCIG00000017966	HELZ2	80	40.476	Phascolarctos_cinereus
ENSDARG00000012600	si:dkey-97a13.6	99	37.213	ENSPPYG00000011241	HELZ2	73	37.361	Pongo_abelii
ENSDARG00000012600	si:dkey-97a13.6	91	44.020	ENSPCAG00000001068	HELZ2	84	44.020	Procavia_capensis
ENSDARG00000012600	si:dkey-97a13.6	98	47.532	ENSPCOG00000017149	HELZ2	72	47.532	Propithecus_coquereli
ENSDARG00000012600	si:dkey-97a13.6	72	52.522	ENSPVAG00000007183	HELZ2	63	52.522	Pteropus_vampyrus
ENSDARG00000012600	si:dkey-97a13.6	98	45.445	ENSPNAG00000016859	helz2	78	45.654	Pygocentrus_nattereri
ENSDARG00000012600	si:dkey-97a13.6	96	46.649	ENSRNOG00000013267	Helz2	64	46.409	Rattus_norvegicus
ENSDARG00000012600	si:dkey-97a13.6	96	47.059	ENSRBIG00000044653	HELZ2	73	47.059	Rhinopithecus_bieti
ENSDARG00000012600	si:dkey-97a13.6	96	46.803	ENSRROG00000009088	HELZ2	73	46.803	Rhinopithecus_roxellana
ENSDARG00000012600	si:dkey-97a13.6	98	45.038	ENSSBOG00000033345	HELZ2	73	45.038	Saimiri_boliviensis_boliviensis
ENSDARG00000012600	si:dkey-97a13.6	99	40.780	ENSSHAG00000018163	HELZ2	72	40.810	Sarcophilus_harrisii
ENSDARG00000012600	si:dkey-97a13.6	99	52.108	ENSSFOG00015020580	helz2	71	52.108	Scleropages_formosus
ENSDARG00000012600	si:dkey-97a13.6	66	52.232	ENSSARG00000010235	-	56	52.232	Sorex_araneus
ENSDARG00000012600	si:dkey-97a13.6	54	45.161	ENSSPUG00000018590	-	98	45.161	Sphenodon_punctatus
ENSDARG00000012600	si:dkey-97a13.6	98	36.316	ENSSSCG00000003306	HELZ2	71	36.250	Sus_scrofa
ENSDARG00000012600	si:dkey-97a13.6	99	42.389	ENSTGUG00000006981	HELZ2	84	42.389	Taeniopygia_guttata
ENSDARG00000012600	si:dkey-97a13.6	84	38.193	ENSUAMG00000025224	-	94	36.179	Ursus_americanus
ENSDARG00000012600	si:dkey-97a13.6	97	46.803	ENSVVUG00000015158	HELZ2	66	43.182	Vulpes_vulpes