EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000012603 (Gene tree)
Gene ID
394189
Gene Symbol
eif3ja
Alias
eif3j|eif3s1|fb48g07|wu:fb48g07|zgc:63801
Full Name
eukaryotic translation initiation factor 3%2C subunit Ja
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
6848 bases
Position
chr25:31900825-31907672
Accession
ZDB-GENE-040426-1266
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000124801eIF3_subunitPF08597.102.5e-6611
ENSDARP00000124381eIF3_subunitPF08597.108.3e-6211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000149707-703-ENSDARP00000124381229 (aa)-F8W3K1
ENSDART00000150236-725--- (aa)--
ENSDART00000149471-1802-ENSDARP00000124801249 (aa)-F1RA22
Gene Model
Click here to download ENSDARG00000012603's gene model file
Pathways
Pathway IDPathway NameSource
dre03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000012603's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000012603eif3ja10062.406ENSDARG00000053370eif3jb10060.902
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000012603eif3ja9965.217ENSG00000104131EIF3J9677.941Homo_sapiens
ENSDARG00000012603eif3ja10072.112ENSAPOG00000010317eif3jb10072.112Acanthochromis_polyacanthus
ENSDARG00000012603eif3ja9965.217ENSAMEG00000015104EIF3J9766.403Ailuropoda_melanoleuca
ENSDARG00000012603eif3ja9769.262ENSACIG00000006469eif3jb9968.852Amphilophus_citrinellus
ENSDARG00000012603eif3ja10074.026ENSAOCG00000014984eif3jb10073.307Amphiprion_ocellaris
ENSDARG00000012603eif3ja10073.593ENSAPEG00000015854eif3jb10072.908Amphiprion_percula
ENSDARG00000012603eif3ja10071.861ENSATEG00000008562eif3jb10072.112Anabas_testudineus
ENSDARG00000012603eif3ja6570.988ENSAPLG00000008484EIF3J10070.988Anas_platyrhynchos
ENSDARG00000012603eif3ja8865.842ENSACAG00000013759EIF3J8669.588Anolis_carolinensis
ENSDARG00000012603eif3ja9656.379ENSANAG00000035652-9658.943Aotus_nancymaae
ENSDARG00000012603eif3ja9965.217ENSANAG00000019682EIF3J9777.941Aotus_nancymaae
ENSDARG00000012603eif3ja9772.951ENSACLG00000026284eif3jb9973.361Astatotilapia_calliptera
ENSDARG00000012603eif3ja10083.550ENSAMXG00000030386eif3ja10080.080Astyanax_mexicanus
ENSDARG00000012603eif3ja10063.077ENSAMXG00000034194eif3jb10062.692Astyanax_mexicanus
ENSDARG00000012603eif3ja9965.613ENSBTAG00000000359EIF3J9866.798Bos_taurus
ENSDARG00000012603eif3ja9965.217ENSCJAG00000002412EIF3J9577.941Callithrix_jacchus
ENSDARG00000012603eif3ja9965.217ENSCAFG00000013577EIF3J9766.403Canis_familiaris
ENSDARG00000012603eif3ja9961.265ENSCAFG00020022194EIF3J9561.660Canis_lupus_dingo
ENSDARG00000012603eif3ja9763.968ENSCHIG00000022155-9764.372Capra_hircus
ENSDARG00000012603eif3ja9961.265ENSCHIG00000023791EIF3J9761.660Capra_hircus
ENSDARG00000012603eif3ja9466.109ENSTSYG00000013685EIF3J10077.941Carlito_syrichta
ENSDARG00000012603eif3ja9965.217ENSCPOG00000012396EIF3J9566.008Cavia_porcellus
ENSDARG00000012603eif3ja9965.217ENSCCAG00000028410EIF3J9777.941Cebus_capucinus
ENSDARG00000012603eif3ja6661.585ENSCCAG00000036406-8659.585Cebus_capucinus
ENSDARG00000012603eif3ja9954.435ENSCCAG00000014291-9550.988Cebus_capucinus
ENSDARG00000012603eif3ja9965.217ENSCATG00000033376EIF3J9677.941Cercocebus_atys
ENSDARG00000012603eif3ja8567.925ENSCLAG00000017286EIF3J9168.912Chinchilla_lanigera
ENSDARG00000012603eif3ja9964.427ENSCSAG00000018642-9765.613Chlorocebus_sabaeus
ENSDARG00000012603eif3ja9962.698ENSCPBG00000025162EIF3J9962.698Chrysemys_picta_bellii
ENSDARG00000012603eif3ja9939.912ENSCING00000020776-9841.767Ciona_intestinalis
ENSDARG00000012603eif3ja10038.800ENSCSAVG00000003021-9839.600Ciona_savignyi
ENSDARG00000012603eif3ja9964.453ENSCANG00000036763EIF3J9777.941Colobus_angolensis_palliatus
ENSDARG00000012603eif3ja9965.613ENSCGRG00001009334-9666.798Cricetulus_griseus_chok1gshd
ENSDARG00000012603eif3ja6969.942ENSCGRG00000016980-5869.430Cricetulus_griseus_crigri
ENSDARG00000012603eif3ja10068.675ENSCSEG00000002171eif3jb10069.880Cynoglossus_semilaevis
ENSDARG00000012603eif3ja10058.635ENSCVAG00000016639eif3jb10053.815Cyprinodon_variegatus
ENSDARG00000012603eif3ja9964.314ENSDNOG00000042545EIF3J9465.490Dasypus_novemcinctus
ENSDARG00000012603eif3ja9939.759FBgn0027619eIF3j9937.903Drosophila_melanogaster
ENSDARG00000012603eif3ja10045.064ENSEBUG00000001522eif3jb10044.664Eptatretus_burgeri
ENSDARG00000012603eif3ja9961.265ENSEASG00005018015EIF3J9561.660Equus_asinus_asinus
ENSDARG00000012603eif3ja8567.925ENSEEUG00000000932EIF3J9467.677Erinaceus_europaeus
ENSDARG00000012603eif3ja10076.285ENSELUG00000005499eif3ja10073.518Esox_lucius
ENSDARG00000012603eif3ja10072.835ENSELUG00000017273eif3jb10072.441Esox_lucius
ENSDARG00000012603eif3ja9965.217ENSFCAG00000034878EIF3J9777.941Felis_catus
ENSDARG00000012603eif3ja8568.041ENSFALG00000004996EIF3J9069.948Ficedula_albicollis
ENSDARG00000012603eif3ja6968.208ENSFDAG00000006854EIF3J9167.876Fukomys_damarensis
ENSDARG00000012603eif3ja10071.179ENSFHEG00000019467eif3jb10072.289Fundulus_heteroclitus
ENSDARG00000012603eif3ja9866.667ENSGMOG00000016027eif3jb9965.854Gadus_morhua
ENSDARG00000012603eif3ja10056.800ENSGMOG00000018865-10054.800Gadus_morhua
ENSDARG00000012603eif3ja9967.382ENSGALG00000008187EIF3J9967.194Gallus_gallus
ENSDARG00000012603eif3ja10071.616ENSGAFG00000013574eif3jb10072.289Gambusia_affinis
ENSDARG00000012603eif3ja10069.170ENSGACG00000015551eif3jb10069.170Gasterosteus_aculeatus
ENSDARG00000012603eif3ja9659.426ENSGAGG00000015010EIF3J9860.630Gopherus_agassizii
ENSDARG00000012603eif3ja9068.444ENSGGOG00000000548EIF3J9969.333Gorilla_gorilla
ENSDARG00000012603eif3ja10072.908ENSHBUG00000014433eif3jb10072.908Haplochromis_burtoni
ENSDARG00000012603eif3ja9746.154ENSHGLG00000003602-9451.626Heterocephalus_glaber_female
ENSDARG00000012603eif3ja9858.635ENSHGLG00000020813-9758.498Heterocephalus_glaber_female
ENSDARG00000012603eif3ja9948.016ENSHGLG00000003445-9446.825Heterocephalus_glaber_female
ENSDARG00000012603eif3ja9965.217ENSHGLG00000015053-9666.008Heterocephalus_glaber_female
ENSDARG00000012603eif3ja9952.174ENSHGLG00100007247-9551.383Heterocephalus_glaber_male
ENSDARG00000012603eif3ja9947.619ENSHGLG00100008711-9448.413Heterocephalus_glaber_male
ENSDARG00000012603eif3ja9956.223ENSHGLG00100019163-9656.735Heterocephalus_glaber_male
ENSDARG00000012603eif3ja6968.786ENSHGLG00100007538-9168.394Heterocephalus_glaber_male
ENSDARG00000012603eif3ja10067.871ENSHCOG00000008338eif3jb10070.683Hippocampus_comes
ENSDARG00000012603eif3ja10082.609ENSIPUG00000020304eif3ja10081.200Ictalurus_punctatus
ENSDARG00000012603eif3ja10055.859ENSIPUG00000015427eif3jb10055.469Ictalurus_punctatus
ENSDARG00000012603eif3ja9965.476ENSSTOG00000025483EIF3J9666.403Ictidomys_tridecemlineatus
ENSDARG00000012603eif3ja9970.565ENSKMAG00000002556eif3jb9171.774Kryptolebias_marmoratus
ENSDARG00000012603eif3ja10070.130ENSLBEG00000001665eif3jb10072.112Labrus_bergylta
ENSDARG00000012603eif3ja10058.547ENSLACG00000011985EIF3J9857.634Latimeria_chalumnae
ENSDARG00000012603eif3ja10074.699ENSLOCG00000013769eif3ja9874.699Lepisosteus_oculatus
ENSDARG00000012603eif3ja7664.894ENSLAFG00000009268EIF3J9168.912Loxodonta_africana
ENSDARG00000012603eif3ja9965.217ENSMFAG00000031049EIF3J9677.941Macaca_fascicularis
ENSDARG00000012603eif3ja9965.217ENSMMUG00000014288EIF3J9677.941Macaca_mulatta
ENSDARG00000012603eif3ja9965.217ENSMNEG00000022347EIF3J9677.941Macaca_nemestrina
ENSDARG00000012603eif3ja8567.925ENSMLEG00000040280EIF3J9168.912Mandrillus_leucophaeus
ENSDARG00000012603eif3ja10071.245ENSMAMG00000000869eif3jb10070.356Mastacembelus_armatus
ENSDARG00000012603eif3ja10072.510ENSMZEG00005001694eif3jb10072.510Maylandia_zebra
ENSDARG00000012603eif3ja8469.271ENSMGAG00000010307EIF3J9169.430Meleagris_gallopavo
ENSDARG00000012603eif3ja9965.217ENSMAUG00000019190-9666.403Mesocricetus_auratus
ENSDARG00000012603eif3ja9948.855ENSMICG00000026531-9652.610Microcebus_murinus
ENSDARG00000012603eif3ja9964.567ENSMICG00000005006-9677.941Microcebus_murinus
ENSDARG00000012603eif3ja9965.613ENSMOCG00000022505-9666.798Microtus_ochrogaster
ENSDARG00000012603eif3ja9760.569ENSMMOG00000017326eif3jb9965.984Mola_mola
ENSDARG00000012603eif3ja5171.875ENSMODG00000023573-10071.875Monodelphis_domestica
ENSDARG00000012603eif3ja5070.400ENSMODG00000017696-10070.400Monodelphis_domestica
ENSDARG00000012603eif3ja9867.206ENSMALG00000018222eif3jb9467.206Monopterus_albus
ENSDARG00000012603eif3ja6270.588MGP_CAROLIEiJ_G0024202-7169.672Mus_caroli
ENSDARG00000012603eif3ja9965.217MGP_CAROLIEiJ_G0024201-9666.403Mus_caroli
ENSDARG00000012603eif3ja9965.613ENSMUSG00000027236Eif3j19666.798Mus_musculus
ENSDARG00000012603eif3ja9965.613ENSMUSG00000043424Eif3j29566.798Mus_musculus
ENSDARG00000012603eif3ja6270.588MGP_PahariEiJ_G0025646-7169.672Mus_pahari
ENSDARG00000012603eif3ja9965.217MGP_PahariEiJ_G0025645-9666.403Mus_pahari
ENSDARG00000012603eif3ja5369.697MGP_SPRETEiJ_G0025120-8969.697Mus_spretus
ENSDARG00000012603eif3ja8558.411ENSMPUG00000010765EIF3J9158.462Mustela_putorius_furo
ENSDARG00000012603eif3ja9966.008ENSMLUG00000023600EIF3J9565.613Myotis_lucifugus
ENSDARG00000012603eif3ja9965.613ENSNGAG00000017917-9666.403Nannospalax_galili
ENSDARG00000012603eif3ja9769.547ENSNBRG00000014228eif3jb9867.323Neolamprologus_brichardi
ENSDARG00000012603eif3ja9954.217ENSNLEG00000031859-9646.565Nomascus_leucogenys
ENSDARG00000012603eif3ja9965.217ENSNLEG00000005568EIF3J9677.941Nomascus_leucogenys
ENSDARG00000012603eif3ja5664.341ENSMEUG00000010372EIF3J9263.399Notamacropus_eugenii
ENSDARG00000012603eif3ja10065.354ENSODEG00000016386-9765.992Octodon_degus
ENSDARG00000012603eif3ja5859.028ENSODEG00000000653-7465.278Octodon_degus
ENSDARG00000012603eif3ja9965.613ENSODEG00000018669-9665.217Octodon_degus
ENSDARG00000012603eif3ja8561.500ENSODEG00000019255-9161.000Octodon_degus
ENSDARG00000012603eif3ja10071.429ENSONIG00000006245eif3jb10069.721Oreochromis_niloticus
ENSDARG00000012603eif3ja8564.186ENSOANG00000007805-8866.667Ornithorhynchus_anatinus
ENSDARG00000012603eif3ja9963.636ENSOCUG00000005376EIF3J9762.646Oryctolagus_cuniculus
ENSDARG00000012603eif3ja10067.059ENSORLG00000006244eif3jb9868.952Oryzias_latipes
ENSDARG00000012603eif3ja10066.667ENSORLG00020013628eif3jb9368.235Oryzias_latipes_hni
ENSDARG00000012603eif3ja10065.490ENSORLG00015012204eif3jb9367.843Oryzias_latipes_hsok
ENSDARG00000012603eif3ja10066.929ENSOMEG00000019427eif3jb9865.625Oryzias_melastigma
ENSDARG00000012603eif3ja9966.008ENSOGAG00000004694EIF3J9567.194Otolemur_garnettii
ENSDARG00000012603eif3ja8568.720ENSOARG00000003638EIF3J9468.687Ovis_aries
ENSDARG00000012603eif3ja9965.217ENSPPRG00000001550EIF3J9777.941Panthera_pardus
ENSDARG00000012603eif3ja9965.217ENSPTRG00000051845EIF3J9677.941Pan_troglodytes
ENSDARG00000012603eif3ja9965.217ENSPANG00000018029EIF3J9677.941Papio_anubis
ENSDARG00000012603eif3ja10072.973ENSPKIG00000015047-10072.201Paramormyrops_kingsleyae
ENSDARG00000012603eif3ja10064.808ENSPKIG00000016009EIF3J10064.808Paramormyrops_kingsleyae
ENSDARG00000012603eif3ja6173.684ENSPSIG00000007786EIF3J7868.557Pelodiscus_sinensis
ENSDARG00000012603eif3ja9760.887ENSPMGG00000004930eif3jb9962.903Periophthalmus_magnuspinnatus
ENSDARG00000012603eif3ja6147.368ENSPMAG00000000533eif3jb9648.684Petromyzon_marinus
ENSDARG00000012603eif3ja9962.151ENSPCIG00000018265-9562.151Phascolarctos_cinereus
ENSDARG00000012603eif3ja9972.984ENSPFOG00000003061eif3jb9972.984Poecilia_formosa
ENSDARG00000012603eif3ja10071.616ENSPLAG00000013586eif3jb10072.289Poecilia_latipinna
ENSDARG00000012603eif3ja10073.494ENSPMEG00000007601eif3jb10073.494Poecilia_mexicana
ENSDARG00000012603eif3ja10072.052ENSPREG00000022834eif3jb10071.888Poecilia_reticulata
ENSDARG00000012603eif3ja9958.893ENSPPYG00000006431EIF3J9760.474Pongo_abelii
ENSDARG00000012603eif3ja9964.822ENSPCAG00000016156EIF3J9766.403Procavia_capensis
ENSDARG00000012603eif3ja9954.545ENSPCOG00000021934EIF3J9653.360Propithecus_coquereli
ENSDARG00000012603eif3ja9964.378ENSPVAG00000014177EIF3J9766.798Pteropus_vampyrus
ENSDARG00000012603eif3ja9769.672ENSPNYG00000006813eif3jb9969.672Pundamilia_nyererei
ENSDARG00000012603eif3ja10057.752ENSPNAG00000013230eif3jb10060.078Pygocentrus_nattereri
ENSDARG00000012603eif3ja10082.251ENSPNAG00000017022eif3ja10081.275Pygocentrus_nattereri
ENSDARG00000012603eif3ja9965.217ENSRNOG00000016459Eif3j9766.403Rattus_norvegicus
ENSDARG00000012603eif3ja8567.925ENSRBIG00000044268EIF3J9168.912Rhinopithecus_bieti
ENSDARG00000012603eif3ja9958.730ENSRROG00000029397-9559.524Rhinopithecus_roxellana
ENSDARG00000012603eif3ja9056.872ENSRROG00000028981-9157.416Rhinopithecus_roxellana
ENSDARG00000012603eif3ja9844.490ENSSBOG00000032137-9048.571Saimiri_boliviensis_boliviensis
ENSDARG00000012603eif3ja9665.432ENSSBOG00000035282EIF3J9677.941Saimiri_boliviensis_boliviensis
ENSDARG00000012603eif3ja8966.216ENSSHAG00000016772EIF3J8967.677Sarcophilus_harrisii
ENSDARG00000012603eif3ja10071.206ENSSFOG00015024043eif3j10068.800Scleropages_formosus
ENSDARG00000012603eif3ja10072.052ENSSFOG00015015383EIF3J10071.084Scleropages_formosus
ENSDARG00000012603eif3ja9766.667ENSSMAG00000021380eif3jb9167.755Scophthalmus_maximus
ENSDARG00000012603eif3ja10072.294ENSSDUG00000008165eif3jb10072.510Seriola_dumerili
ENSDARG00000012603eif3ja10072.294ENSSLDG00000000656eif3jb10072.112Seriola_lalandi_dorsalis
ENSDARG00000012603eif3ja9966.008ENSSARG00000005130EIF3J9766.008Sorex_araneus
ENSDARG00000012603eif3ja10072.727ENSSPAG00000019827eif3jb10072.112Stegastes_partitus
ENSDARG00000012603eif3ja9960.474ENSSSCG00000004691EIF3J9268.586Sus_scrofa
ENSDARG00000012603eif3ja8559.278ENSTGUG00000009878EIF3J9060.104Taeniopygia_guttata
ENSDARG00000012603eif3ja9552.232ENSTRUG00000017281eif3jb6661.463Takifugu_rubripes
ENSDARG00000012603eif3ja10068.775ENSTNIG00000009400eif3jb9868.379Tetraodon_nigroviridis
ENSDARG00000012603eif3ja9961.111ENSTBEG00000013922EIF3J9761.111Tupaia_belangeri
ENSDARG00000012603eif3ja7860.326ENSTTRG00000015233EIF3J9760.870Tursiops_truncatus
ENSDARG00000012603eif3ja9961.265ENSUAMG00000028179EIF3J9761.660Ursus_americanus
ENSDARG00000012603eif3ja8567.925ENSVPAG00000006308EIF3J9168.912Vicugna_pacos
ENSDARG00000012603eif3ja9961.265ENSVVUG00000010868EIF3J9561.660Vulpes_vulpes
ENSDARG00000012603eif3ja10060.305ENSXETG00000007840eif3j9658.397Xenopus_tropicalis
ENSDARG00000012603eif3ja7669.072ENSXCOG00000011013eif3jb9569.347Xiphophorus_couchianus
ENSDARG00000012603eif3ja9969.960ENSXMAG00000001192eif3jb9969.960Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001732formation of cytoplasmic translation initiation complex-IEAProcess
GO:0003743translation initiation factor activity-IEAFunction
GO:0005737cytoplasm-IEAComponent
GO:0005852eukaryotic translation initiation factor 3 complex21873635.IBAComponent
GO:0005852eukaryotic translation initiation factor 3 complex-IEAComponent
GO:0005852eukaryotic translation initiation factor 3 complex-ISSComponent
GO:0006412translation-IEAProcess
GO:0006413translational initiation-IEAProcess
GO:0016282eukaryotic 43S preinitiation complex-IEAComponent
GO:0033290eukaryotic 48S preinitiation complex-IEAComponent

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