EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000013075 (Gene tree)
Gene ID: 436829
Gene Symbol: mrpl11
Alias: zgc:92770
Full Name: mitochondrial ribosomal protein L11
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 63177 bases
Position: chr14:30557361-30620537
Accession: ZDB-GENE-040718-294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000016196	Ribosomal_L11	PF00298.19	4.9e-23	1	1
ENSDARP00000147513	Ribosomal_L11	PF00298.19	4.9e-23	1	1
ENSDARP00000016196	Ribosomal_L11_N	PF03946.14	3.6e-23	1	1
ENSDARP00000147513	Ribosomal_L11_N	PF03946.14	3.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000184303	-	949	-	ENSDARP00000147513	196 (aa)	-	F1Q685
ENSDART00000135311	-	708	-	-	- (aa)	-	-
ENSDART00000019898	-	897	-	ENSDARP00000016196	196 (aa)	-	F1Q685
ENSDART00000147447	-	544	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000013075's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000013075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000013075	mrpl11	96	66.316	ENSG00000174547	MRPL11	97	67.123	Homo_sapiens
ENSDARG00000013075	mrpl11	90	79.545	ENSAPOG00000005713	mrpl11	90	79.545	Acanthochromis_polyacanthus
ENSDARG00000013075	mrpl11	92	66.667	ENSAMEG00000011350	MRPL11	91	66.857	Ailuropoda_melanoleuca
ENSDARG00000013075	mrpl11	81	85.443	ENSACIG00000010480	mrpl11	82	85.443	Amphilophus_citrinellus
ENSDARG00000013075	mrpl11	90	83.523	ENSAOCG00000007308	mrpl11	91	83.523	Amphiprion_ocellaris
ENSDARG00000013075	mrpl11	90	83.523	ENSAPEG00000008704	mrpl11	91	83.523	Amphiprion_percula
ENSDARG00000013075	mrpl11	90	79.545	ENSATEG00000015240	mrpl11	92	79.545	Anabas_testudineus
ENSDARG00000013075	mrpl11	96	65.263	ENSANAG00000021898	MRPL11	91	65.714	Aotus_nancymaae
ENSDARG00000013075	mrpl11	88	82.558	ENSACLG00000018663	mrpl11	90	81.818	Astatotilapia_calliptera
ENSDARG00000013075	mrpl11	87	88.304	ENSAMXG00000036903	mrpl11	92	87.500	Astyanax_mexicanus
ENSDARG00000013075	mrpl11	92	66.111	ENSBTAG00000053687	MRPL11	91	66.286	Bos_taurus
ENSDARG00000013075	mrpl11	92	43.646	WBGene00015133	mrpl-11	83	44.848	Caenorhabditis_elegans
ENSDARG00000013075	mrpl11	96	64.211	ENSCJAG00000001470	MRPL11	90	64.571	Callithrix_jacchus
ENSDARG00000013075	mrpl11	92	66.667	ENSCAFG00000012706	MRPL11	91	66.857	Canis_familiaris
ENSDARG00000013075	mrpl11	92	66.667	ENSCAFG00020015432	MRPL11	91	66.857	Canis_lupus_dingo
ENSDARG00000013075	mrpl11	92	65.556	ENSCHIG00000014851	MRPL11	91	65.714	Capra_hircus
ENSDARG00000013075	mrpl11	92	67.222	ENSTSYG00000008712	MRPL11	91	67.429	Carlito_syrichta
ENSDARG00000013075	mrpl11	92	66.667	ENSCPOG00000000687	MRPL11	91	66.857	Cavia_porcellus
ENSDARG00000013075	mrpl11	96	66.842	ENSCCAG00000030195	MRPL11	91	67.429	Cebus_capucinus
ENSDARG00000013075	mrpl11	96	64.737	ENSCATG00000029345	MRPL11	91	65.143	Cercocebus_atys
ENSDARG00000013075	mrpl11	92	67.222	ENSCLAG00000016161	MRPL11	91	67.429	Chinchilla_lanigera
ENSDARG00000013075	mrpl11	96	64.211	ENSCSAG00000008217	MRPL11	91	64.571	Chlorocebus_sabaeus
ENSDARG00000013075	mrpl11	80	69.231	ENSCHOG00000010471	MRPL11	99	69.231	Choloepus_hoffmanni
ENSDARG00000013075	mrpl11	88	39.535	ENSCING00000004394	-	87	39.535	Ciona_intestinalis
ENSDARG00000013075	mrpl11	96	65.263	ENSCANG00000029750	MRPL11	91	65.714	Colobus_angolensis_palliatus
ENSDARG00000013075	mrpl11	92	65.000	ENSCGRG00001012748	Mrpl11	91	65.143	Cricetulus_griseus_chok1gshd
ENSDARG00000013075	mrpl11	92	65.000	ENSCGRG00000017537	Mrpl11	91	65.143	Cricetulus_griseus_crigri
ENSDARG00000013075	mrpl11	90	80.114	ENSCSEG00000004826	mrpl11	90	80.114	Cynoglossus_semilaevis
ENSDARG00000013075	mrpl11	90	81.818	ENSCVAG00000018209	mrpl11	90	81.818	Cyprinodon_variegatus
ENSDARG00000013075	mrpl11	91	67.416	ENSDNOG00000037861	MRPL11	91	67.429	Dasypus_novemcinctus
ENSDARG00000013075	mrpl11	81	68.553	ENSDORG00000023531	Mrpl11	100	69.427	Dipodomys_ordii
ENSDARG00000013075	mrpl11	90	47.159	FBgn0038234	mRpL11	88	47.126	Drosophila_melanogaster
ENSDARG00000013075	mrpl11	96	65.789	ENSETEG00000015216	MRPL11	91	66.286	Echinops_telfairi
ENSDARG00000013075	mrpl11	69	61.029	ENSEBUG00000008014	mrpl11	73	62.121	Eptatretus_burgeri
ENSDARG00000013075	mrpl11	92	61.111	ENSEASG00005004988	MRPL11	91	61.143	Equus_asinus_asinus
ENSDARG00000013075	mrpl11	92	65.556	ENSECAG00000013737	MRPL11	91	65.714	Equus_caballus
ENSDARG00000013075	mrpl11	94	62.500	ENSEEUG00000011113	MRPL11	91	62.857	Erinaceus_europaeus
ENSDARG00000013075	mrpl11	87	83.626	ENSELUG00000002807	mrpl11	92	82.386	Esox_lucius
ENSDARG00000013075	mrpl11	91	65.730	ENSFCAG00000028353	MRPL11	91	65.714	Felis_catus
ENSDARG00000013075	mrpl11	92	65.000	ENSFDAG00000011509	MRPL11	91	65.143	Fukomys_damarensis
ENSDARG00000013075	mrpl11	90	83.523	ENSFHEG00000015521	mrpl11	90	83.523	Fundulus_heteroclitus
ENSDARG00000013075	mrpl11	90	79.096	ENSGMOG00000004943	mrpl11	95	79.096	Gadus_morhua
ENSDARG00000013075	mrpl11	90	80.682	ENSGAFG00000019857	mrpl11	90	80.682	Gambusia_affinis
ENSDARG00000013075	mrpl11	90	77.966	ENSGACG00000017077	mrpl11	91	77.966	Gasterosteus_aculeatus
ENSDARG00000013075	mrpl11	87	70.175	ENSGAGG00000013814	MRPL11	90	69.714	Gopherus_agassizii
ENSDARG00000013075	mrpl11	92	66.851	ENSGGOG00000001300	MRPL11	91	66.857	Gorilla_gorilla
ENSDARG00000013075	mrpl11	88	83.140	ENSHBUG00000013559	mrpl11	90	82.386	Haplochromis_burtoni
ENSDARG00000013075	mrpl11	92	66.111	ENSHGLG00000016487	MRPL11	91	66.286	Heterocephalus_glaber_female
ENSDARG00000013075	mrpl11	92	66.111	ENSHGLG00100017113	MRPL11	91	66.286	Heterocephalus_glaber_male
ENSDARG00000013075	mrpl11	90	81.250	ENSHCOG00000004011	mrpl11	89	81.250	Hippocampus_comes
ENSDARG00000013075	mrpl11	90	89.773	ENSIPUG00000021526	MRPL11	92	89.773	Ictalurus_punctatus
ENSDARG00000013075	mrpl11	81	67.089	ENSSTOG00000025971	MRPL11	100	67.089	Ictidomys_tridecemlineatus
ENSDARG00000013075	mrpl11	92	65.556	ENSJJAG00000020430	Mrpl11	91	65.714	Jaculus_jaculus
ENSDARG00000013075	mrpl11	90	85.227	ENSKMAG00000003125	mrpl11	89	85.227	Kryptolebias_marmoratus
ENSDARG00000013075	mrpl11	90	80.682	ENSLBEG00000007638	mrpl11	90	80.682	Labrus_bergylta
ENSDARG00000013075	mrpl11	67	60.606	ENSLACG00000005779	MRPL11	86	60.606	Latimeria_chalumnae
ENSDARG00000013075	mrpl11	94	70.588	ENSLOCG00000000617	mrpl11	89	71.839	Lepisosteus_oculatus
ENSDARG00000013075	mrpl11	96	66.316	ENSLAFG00000011143	MRPL11	91	66.857	Loxodonta_africana
ENSDARG00000013075	mrpl11	96	64.211	ENSMFAG00000042321	MRPL11	91	64.571	Macaca_fascicularis
ENSDARG00000013075	mrpl11	96	64.211	ENSMMUG00000008876	MRPL11	91	64.571	Macaca_mulatta
ENSDARG00000013075	mrpl11	96	64.211	ENSMNEG00000041903	MRPL11	91	64.571	Macaca_nemestrina
ENSDARG00000013075	mrpl11	96	64.737	ENSMLEG00000044104	MRPL11	91	65.143	Mandrillus_leucophaeus
ENSDARG00000013075	mrpl11	90	78.409	ENSMAMG00000021038	mrpl11	90	78.409	Mastacembelus_armatus
ENSDARG00000013075	mrpl11	88	83.140	ENSMZEG00005005523	mrpl11	90	82.386	Maylandia_zebra
ENSDARG00000013075	mrpl11	92	65.000	ENSMAUG00000006941	Mrpl11	91	65.143	Mesocricetus_auratus
ENSDARG00000013075	mrpl11	92	67.778	ENSMICG00000003759	MRPL11	91	68.987	Microcebus_murinus
ENSDARG00000013075	mrpl11	92	65.556	ENSMOCG00000018594	Mrpl11	91	65.714	Microtus_ochrogaster
ENSDARG00000013075	mrpl11	90	65.909	ENSMMOG00000002541	mrpl11	88	65.909	Mola_mola
ENSDARG00000013075	mrpl11	87	63.158	ENSMODG00000008273	MRPL11	91	62.286	Monodelphis_domestica
ENSDARG00000013075	mrpl11	93	79.121	ENSMALG00000011049	mrpl11	97	79.545	Monopterus_albus
ENSDARG00000013075	mrpl11	92	65.556	MGP_CAROLIEiJ_G0022526	Mrpl11	91	65.714	Mus_caroli
ENSDARG00000013075	mrpl11	92	65.556	ENSMUSG00000024902	Mrpl11	91	65.714	Mus_musculus
ENSDARG00000013075	mrpl11	92	65.000	MGP_PahariEiJ_G0014023	Mrpl11	91	65.143	Mus_pahari
ENSDARG00000013075	mrpl11	92	65.556	MGP_SPRETEiJ_G0023440	Mrpl11	91	65.714	Mus_spretus
ENSDARG00000013075	mrpl11	92	67.778	ENSMPUG00000003047	MRPL11	91	68.000	Mustela_putorius_furo
ENSDARG00000013075	mrpl11	92	65.556	ENSMLUG00000004047	MRPL11	91	65.341	Myotis_lucifugus
ENSDARG00000013075	mrpl11	92	66.111	ENSNGAG00000005875	Mrpl11	91	66.286	Nannospalax_galili
ENSDARG00000013075	mrpl11	88	83.140	ENSNBRG00000023089	mrpl11	90	82.386	Neolamprologus_brichardi
ENSDARG00000013075	mrpl11	81	67.089	ENSNLEG00000028893	MRPL11	87	67.089	Nomascus_leucogenys
ENSDARG00000013075	mrpl11	91	63.483	ENSMEUG00000010291	MRPL11	91	64.000	Notamacropus_eugenii
ENSDARG00000013075	mrpl11	90	65.537	ENSODEG00000017704	-	99	65.714	Octodon_degus
ENSDARG00000013075	mrpl11	89	64.571	ENSODEG00000014340	-	85	64.571	Octodon_degus
ENSDARG00000013075	mrpl11	73	77.241	ENSONIG00000005480	mrpl11	89	76.510	Oreochromis_niloticus
ENSDARG00000013075	mrpl11	92	63.889	ENSOCUG00000020926	MRPL11	91	64.000	Oryctolagus_cuniculus
ENSDARG00000013075	mrpl11	90	83.523	ENSORLG00000001990	mrpl11	90	83.523	Oryzias_latipes
ENSDARG00000013075	mrpl11	90	83.523	ENSORLG00020020145	mrpl11	90	83.523	Oryzias_latipes_hni
ENSDARG00000013075	mrpl11	90	83.523	ENSORLG00015009657	mrpl11	90	83.523	Oryzias_latipes_hsok
ENSDARG00000013075	mrpl11	90	83.523	ENSOMEG00000017598	mrpl11	90	83.523	Oryzias_melastigma
ENSDARG00000013075	mrpl11	92	68.333	ENSOGAG00000010448	MRPL11	88	69.143	Otolemur_garnettii
ENSDARG00000013075	mrpl11	92	65.556	ENSOARG00000005178	MRPL11	91	65.714	Ovis_aries
ENSDARG00000013075	mrpl11	96	66.316	ENSPPAG00000028194	MRPL11	91	66.857	Pan_paniscus
ENSDARG00000013075	mrpl11	92	66.111	ENSPPRG00000006994	MRPL11	91	66.286	Panthera_pardus
ENSDARG00000013075	mrpl11	92	66.111	ENSPTIG00000007086	MRPL11	91	66.286	Panthera_tigris_altaica
ENSDARG00000013075	mrpl11	96	66.316	ENSPTRG00000003924	MRPL11	91	66.857	Pan_troglodytes
ENSDARG00000013075	mrpl11	96	64.737	ENSPANG00000018675	MRPL11	91	65.143	Papio_anubis
ENSDARG00000013075	mrpl11	96	73.016	ENSPKIG00000024583	mrpl11	92	74.432	Paramormyrops_kingsleyae
ENSDARG00000013075	mrpl11	87	67.836	ENSPSIG00000003131	MRPL11	90	67.429	Pelodiscus_sinensis
ENSDARG00000013075	mrpl11	90	82.386	ENSPMGG00000017736	mrpl11	90	82.386	Periophthalmus_magnuspinnatus
ENSDARG00000013075	mrpl11	92	64.444	ENSPEMG00000013254	Mrpl11	91	64.571	Peromyscus_maniculatus_bairdii
ENSDARG00000013075	mrpl11	91	65.730	ENSPCIG00000008435	MRPL11	91	66.286	Phascolarctos_cinereus
ENSDARG00000013075	mrpl11	90	82.955	ENSPFOG00000009559	mrpl11	90	82.955	Poecilia_formosa
ENSDARG00000013075	mrpl11	90	83.523	ENSPLAG00000011291	mrpl11	90	83.523	Poecilia_latipinna
ENSDARG00000013075	mrpl11	57	77.477	ENSPMEG00000018314	mrpl11	78	77.477	Poecilia_mexicana
ENSDARG00000013075	mrpl11	90	68.182	ENSPREG00000008953	mrpl11	88	68.182	Poecilia_reticulata
ENSDARG00000013075	mrpl11	96	64.737	ENSPPYG00000003025	MRPL11	91	65.143	Pongo_abelii
ENSDARG00000013075	mrpl11	96	66.842	ENSPCAG00000008371	MRPL11	91	67.429	Procavia_capensis
ENSDARG00000013075	mrpl11	92	66.111	ENSPCOG00000013514	MRPL11	95	67.722	Propithecus_coquereli
ENSDARG00000013075	mrpl11	88	83.140	ENSPNYG00000013744	mrpl11	90	82.386	Pundamilia_nyererei
ENSDARG00000013075	mrpl11	90	90.341	ENSPNAG00000020525	mrpl11	92	90.341	Pygocentrus_nattereri
ENSDARG00000013075	mrpl11	92	64.444	ENSRNOG00000019970	mrpl11	91	64.571	Rattus_norvegicus
ENSDARG00000013075	mrpl11	96	64.211	ENSRBIG00000030370	MRPL11	91	64.571	Rhinopithecus_bieti
ENSDARG00000013075	mrpl11	96	64.211	ENSRROG00000041021	-	91	64.571	Rhinopithecus_roxellana
ENSDARG00000013075	mrpl11	92	64.088	ENSRROG00000036860	-	91	64.000	Rhinopithecus_roxellana
ENSDARG00000013075	mrpl11	78	40.361	YNL185C	MRPL19	99	40.361	Saccharomyces_cerevisiae
ENSDARG00000013075	mrpl11	96	66.316	ENSSBOG00000019968	MRPL11	91	66.857	Saimiri_boliviensis_boliviensis
ENSDARG00000013075	mrpl11	87	66.667	ENSSHAG00000009446	MRPL11	91	65.714	Sarcophilus_harrisii
ENSDARG00000013075	mrpl11	90	75.568	ENSSFOG00015009200	mrpl11	92	75.568	Scleropages_formosus
ENSDARG00000013075	mrpl11	87	81.287	ENSSMAG00000016343	mrpl11	89	81.395	Scophthalmus_maximus
ENSDARG00000013075	mrpl11	90	80.682	ENSSDUG00000018338	mrpl11	90	80.682	Seriola_dumerili
ENSDARG00000013075	mrpl11	90	80.682	ENSSLDG00000022855	mrpl11	90	80.682	Seriola_lalandi_dorsalis
ENSDARG00000013075	mrpl11	90	82.386	ENSSPAG00000006573	mrpl11	91	82.386	Stegastes_partitus
ENSDARG00000013075	mrpl11	92	67.778	ENSSSCG00000012943	MRPL11	91	68.000	Sus_scrofa
ENSDARG00000013075	mrpl11	69	79.412	ENSTRUG00000011804	mrpl11	78	79.412	Takifugu_rubripes
ENSDARG00000013075	mrpl11	69	78.676	ENSTNIG00000016824	mrpl11	88	78.676	Tetraodon_nigroviridis
ENSDARG00000013075	mrpl11	92	66.667	ENSTTRG00000002678	MRPL11	91	66.857	Tursiops_truncatus
ENSDARG00000013075	mrpl11	95	66.316	ENSUAMG00000014879	MRPL11	91	66.857	Ursus_americanus
ENSDARG00000013075	mrpl11	95	66.316	ENSUMAG00000011244	MRPL11	91	66.857	Ursus_maritimus
ENSDARG00000013075	mrpl11	92	63.333	ENSVPAG00000003170	MRPL11	91	63.429	Vicugna_pacos
ENSDARG00000013075	mrpl11	87	67.836	ENSVVUG00000027010	MRPL11	91	66.857	Vulpes_vulpes
ENSDARG00000013075	mrpl11	89	73.143	ENSXETG00000020574	mrpl11	92	72.727	Xenopus_tropicalis
ENSDARG00000013075	mrpl11	69	77.206	ENSXCOG00000015719	mrpl11	80	77.206	Xiphophorus_couchianus
ENSDARG00000013075	mrpl11	90	82.386	ENSXMAG00000023368	mrpl11	99	81.633	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0006412	translation	-	IEA	Process
GO:0015934	large ribosomal subunit	21873635.	IBA	Component
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0070180	large ribosomal subunit rRNA binding	21873635.	IBA	Function