EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000013382 (Gene tree)
Gene ID: 415140
Gene Symbol: cwc15
Alias: wu:fj68d08|zgc:86607
Full Name: CWC15 spliceosome-associated protein homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7119 bases
Position: chr5:23576328-23583446
Accession: ZDB-GENE-040625-10
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000022647	Cwf_Cwc_15	PF04889.12	9.7e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000027217	-	1114	-	ENSDARP00000022647	244 (aa)	-	A5WV15

Gene Model

Click here to download ENSDARG00000013382's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000013382's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000013382	cwc15	100	100.000	ENSDARG00000010752	acsl4b	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000013382	cwc15	100	78.862	ENSG00000150316	CWC15	100	78.862	Homo_sapiens
ENSDARG00000013382	cwc15	100	85.830	ENSAPOG00000003107	cwc15	94	87.045	Acanthochromis_polyacanthus
ENSDARG00000013382	cwc15	100	73.790	ENSAMEG00000011392	CWC15	100	77.419	Ailuropoda_melanoleuca
ENSDARG00000013382	cwc15	100	85.020	ENSACIG00000015258	cwc15	100	86.235	Amphilophus_citrinellus
ENSDARG00000013382	cwc15	100	85.425	ENSAOCG00000010738	cwc15	100	86.640	Amphiprion_ocellaris
ENSDARG00000013382	cwc15	100	85.425	ENSAPEG00000004563	cwc15	100	86.640	Amphiprion_percula
ENSDARG00000013382	cwc15	100	84.615	ENSATEG00000013290	cwc15	100	85.830	Anabas_testudineus
ENSDARG00000013382	cwc15	100	76.518	ENSAPLG00000003221	CWC15	100	76.923	Anas_platyrhynchos
ENSDARG00000013382	cwc15	92	77.093	ENSACAG00000013987	CWC15	94	75.771	Anolis_carolinensis
ENSDARG00000013382	cwc15	100	78.862	ENSANAG00000020484	CWC15	100	78.862	Aotus_nancymaae
ENSDARG00000013382	cwc15	100	84.615	ENSACLG00000012474	cwc15	100	85.830	Astatotilapia_calliptera
ENSDARG00000013382	cwc15	100	92.623	ENSAMXG00000007538	cwc15	100	93.443	Astyanax_mexicanus
ENSDARG00000013382	cwc15	100	73.387	ENSBTAG00000007913	CWC15	100	77.016	Bos_taurus
ENSDARG00000013382	cwc15	100	56.680	WBGene00011687	cwc-15	100	56.275	Caenorhabditis_elegans
ENSDARG00000013382	cwc15	100	78.862	ENSCJAG00000040352	CWC15	100	78.862	Callithrix_jacchus
ENSDARG00000013382	cwc15	100	70.565	ENSCAFG00000005959	-	100	74.194	Canis_familiaris
ENSDARG00000013382	cwc15	100	73.387	ENSCAFG00000004134	CWC15	100	77.016	Canis_familiaris
ENSDARG00000013382	cwc15	100	74.089	ENSCAFG00020016515	CWC15	100	78.138	Canis_lupus_dingo
ENSDARG00000013382	cwc15	100	73.387	ENSCHIG00000013423	CWC15	100	77.016	Capra_hircus
ENSDARG00000013382	cwc15	100	75.709	ENSTSYG00000000407	-	100	79.352	Carlito_syrichta
ENSDARG00000013382	cwc15	100	78.862	ENSTSYG00000010873	-	100	78.862	Carlito_syrichta
ENSDARG00000013382	cwc15	100	50.813	ENSCAPG00000017015	CWC15	93	73.864	Cavia_aperea
ENSDARG00000013382	cwc15	100	78.862	ENSCPOG00000006249	CWC15	100	78.862	Cavia_porcellus
ENSDARG00000013382	cwc15	100	78.862	ENSCCAG00000026289	CWC15	100	78.862	Cebus_capucinus
ENSDARG00000013382	cwc15	100	78.862	ENSCATG00000030235	CWC15	100	78.862	Cercocebus_atys
ENSDARG00000013382	cwc15	100	78.862	ENSCLAG00000000129	CWC15	100	78.862	Chinchilla_lanigera
ENSDARG00000013382	cwc15	100	78.862	ENSCSAG00000003299	CWC15	100	78.862	Chlorocebus_sabaeus
ENSDARG00000013382	cwc15	100	77.328	ENSCPBG00000024037	CWC15	100	78.947	Chrysemys_picta_bellii
ENSDARG00000013382	cwc15	100	56.735	ENSCING00000012768	-	100	55.645	Ciona_intestinalis
ENSDARG00000013382	cwc15	100	54.065	ENSCSAVG00000003476	-	100	54.065	Ciona_savignyi
ENSDARG00000013382	cwc15	100	78.862	ENSCANG00000028070	CWC15	100	78.862	Colobus_angolensis_palliatus
ENSDARG00000013382	cwc15	100	78.455	ENSCGRG00001013337	Cwc15	100	78.455	Cricetulus_griseus_chok1gshd
ENSDARG00000013382	cwc15	100	78.455	ENSCGRG00000015359	Cwc15	100	78.455	Cricetulus_griseus_crigri
ENSDARG00000013382	cwc15	100	88.259	ENSCSEG00000018582	cwc15	94	86.640	Cynoglossus_semilaevis
ENSDARG00000013382	cwc15	100	86.235	ENSCVAG00000014417	cwc15	100	85.020	Cyprinodon_variegatus
ENSDARG00000013382	cwc15	100	73.387	ENSDNOG00000041326	CWC15	100	77.016	Dasypus_novemcinctus
ENSDARG00000013382	cwc15	86	53.917	ENSDNOG00000046295	-	100	53.456	Dasypus_novemcinctus
ENSDARG00000013382	cwc15	100	78.049	ENSDORG00000011075	Cwc15	100	78.049	Dipodomys_ordii
ENSDARG00000013382	cwc15	100	51.698	FBgn0040235	c12.1	100	54.307	Drosophila_melanogaster
ENSDARG00000013382	cwc15	62	76.774	ENSETEG00000006649	-	94	79.452	Echinops_telfairi
ENSDARG00000013382	cwc15	61	69.737	ENSETEG00000010889	-	93	67.133	Echinops_telfairi
ENSDARG00000013382	cwc15	100	64.634	ENSEBUG00000013107	cwc15	100	62.041	Eptatretus_burgeri
ENSDARG00000013382	cwc15	100	75.000	ENSEASG00005011279	CWC15	100	76.613	Equus_asinus_asinus
ENSDARG00000013382	cwc15	100	73.387	ENSECAG00000013314	CWC15	100	77.016	Equus_caballus
ENSDARG00000013382	cwc15	100	75.403	ENSEEUG00000002124	CWC15	100	76.210	Erinaceus_europaeus
ENSDARG00000013382	cwc15	100	85.484	ENSELUG00000008086	cwc15	100	86.694	Esox_lucius
ENSDARG00000013382	cwc15	100	79.268	ENSFCAG00000007826	-	100	79.268	Felis_catus
ENSDARG00000013382	cwc15	100	76.113	ENSFALG00000000326	CWC15	100	76.518	Ficedula_albicollis
ENSDARG00000013382	cwc15	100	78.455	ENSFDAG00000014629	CWC15	100	78.455	Fukomys_damarensis
ENSDARG00000013382	cwc15	100	87.045	ENSFHEG00000002105	cwc15	100	91.304	Fundulus_heteroclitus
ENSDARG00000013382	cwc15	100	66.935	ENSGMOG00000016146	cwc15	100	64.919	Gadus_morhua
ENSDARG00000013382	cwc15	100	76.113	ENSGALG00000017207	CWC15	100	76.518	Gallus_gallus
ENSDARG00000013382	cwc15	100	84.211	ENSGAFG00000005721	cwc15	100	85.425	Gambusia_affinis
ENSDARG00000013382	cwc15	100	83.200	ENSGACG00000020374	cwc15	100	83.200	Gasterosteus_aculeatus
ENSDARG00000013382	cwc15	100	77.733	ENSGAGG00000024008	CWC15	99	79.352	Gopherus_agassizii
ENSDARG00000013382	cwc15	100	78.862	ENSGGOG00000011926	CWC15	100	78.862	Gorilla_gorilla
ENSDARG00000013382	cwc15	100	84.211	ENSHBUG00000003341	cwc15	100	85.425	Haplochromis_burtoni
ENSDARG00000013382	cwc15	100	78.862	ENSHGLG00000006521	CWC15	100	78.862	Heterocephalus_glaber_female
ENSDARG00000013382	cwc15	99	67.078	ENSHGLG00000003773	-	100	65.021	Heterocephalus_glaber_female
ENSDARG00000013382	cwc15	100	63.934	ENSHGLG00100003268	-	100	63.525	Heterocephalus_glaber_male
ENSDARG00000013382	cwc15	100	72.358	ENSHGLG00100007904	-	100	75.610	Heterocephalus_glaber_male
ENSDARG00000013382	cwc15	100	87.854	ENSHCOG00000006089	cwc15	100	87.045	Hippocampus_comes
ENSDARG00000013382	cwc15	100	78.862	ENSSTOG00000002485	CWC15	100	78.862	Ictidomys_tridecemlineatus
ENSDARG00000013382	cwc15	100	77.236	ENSJJAG00000012940	-	100	77.236	Jaculus_jaculus
ENSDARG00000013382	cwc15	100	77.236	ENSJJAG00000012773	-	100	76.829	Jaculus_jaculus
ENSDARG00000013382	cwc15	95	61.966	ENSJJAG00000016968	-	100	65.812	Jaculus_jaculus
ENSDARG00000013382	cwc15	100	83.806	ENSKMAG00000011877	cwc15	100	82.996	Kryptolebias_marmoratus
ENSDARG00000013382	cwc15	100	87.045	ENSLBEG00000026116	cwc15	100	87.854	Labrus_bergylta
ENSDARG00000013382	cwc15	100	78.313	ENSLACG00000012239	CWC15	100	79.116	Latimeria_chalumnae
ENSDARG00000013382	cwc15	100	82.996	ENSLOCG00000007570	cwc15	100	84.211	Lepisosteus_oculatus
ENSDARG00000013382	cwc15	100	73.387	ENSLAFG00000004456	CWC15	100	77.016	Loxodonta_africana
ENSDARG00000013382	cwc15	100	78.862	ENSMFAG00000044052	CWC15	100	78.862	Macaca_fascicularis
ENSDARG00000013382	cwc15	100	78.862	ENSMMUG00000044962	CWC15	100	78.862	Macaca_mulatta
ENSDARG00000013382	cwc15	100	78.862	ENSMNEG00000033968	CWC15	100	78.862	Macaca_nemestrina
ENSDARG00000013382	cwc15	100	78.862	ENSMLEG00000035668	CWC15	100	78.862	Mandrillus_leucophaeus
ENSDARG00000013382	cwc15	100	85.830	ENSMAMG00000013540	cwc15	100	84.615	Mastacembelus_armatus
ENSDARG00000013382	cwc15	100	84.615	ENSMZEG00005015901	cwc15	100	85.830	Maylandia_zebra
ENSDARG00000013382	cwc15	100	76.113	ENSMGAG00000015193	CWC15	100	76.518	Meleagris_gallopavo
ENSDARG00000013382	cwc15	100	78.455	ENSMAUG00000011686	Cwc15	100	78.455	Mesocricetus_auratus
ENSDARG00000013382	cwc15	100	78.862	ENSMICG00000042790	CWC15	100	78.862	Microcebus_murinus
ENSDARG00000013382	cwc15	100	78.049	ENSMOCG00000016094	Cwc15	100	78.049	Microtus_ochrogaster
ENSDARG00000013382	cwc15	100	81.928	ENSMMOG00000016343	cwc15	100	79.116	Mola_mola
ENSDARG00000013382	cwc15	100	57.724	ENSMODG00000003709	-	100	57.317	Monodelphis_domestica
ENSDARG00000013382	cwc15	99	76.423	ENSMODG00000000169	-	96	77.551	Monodelphis_domestica
ENSDARG00000013382	cwc15	100	84.959	ENSMALG00000019325	cwc15	100	89.130	Monopterus_albus
ENSDARG00000013382	cwc15	100	78.455	MGP_CAROLIEiJ_G0031782	Cwc15	100	78.455	Mus_caroli
ENSDARG00000013382	cwc15	100	78.455	ENSMUSG00000004096	Cwc15	96	88.158	Mus_musculus
ENSDARG00000013382	cwc15	100	78.455	MGP_PahariEiJ_G0014658	Cwc15	100	78.455	Mus_pahari
ENSDARG00000013382	cwc15	100	78.455	MGP_SPRETEiJ_G0032902	Cwc15	100	78.455	Mus_spretus
ENSDARG00000013382	cwc15	100	73.387	ENSMPUG00000012265	CWC15	100	77.016	Mustela_putorius_furo
ENSDARG00000013382	cwc15	100	75.806	ENSMLUG00000002032	-	100	76.613	Myotis_lucifugus
ENSDARG00000013382	cwc15	100	75.403	ENSMLUG00000026676	-	100	74.194	Myotis_lucifugus
ENSDARG00000013382	cwc15	100	78.862	ENSNGAG00000016450	Cwc15	100	78.862	Nannospalax_galili
ENSDARG00000013382	cwc15	100	84.615	ENSNBRG00000018245	cwc15	100	85.830	Neolamprologus_brichardi
ENSDARG00000013382	cwc15	100	78.862	ENSNLEG00000031455	CWC15	100	78.862	Nomascus_leucogenys
ENSDARG00000013382	cwc15	100	76.016	ENSOPRG00000001706	-	100	77.236	Ochotona_princeps
ENSDARG00000013382	cwc15	100	65.574	ENSODEG00000002251	-	100	70.492	Octodon_degus
ENSDARG00000013382	cwc15	100	77.642	ENSODEG00000020310	-	100	77.642	Octodon_degus
ENSDARG00000013382	cwc15	100	78.862	ENSODEG00000014060	-	100	78.862	Octodon_degus
ENSDARG00000013382	cwc15	100	64.634	ENSODEG00000008155	-	100	63.008	Octodon_degus
ENSDARG00000013382	cwc15	100	59.426	ENSODEG00000009713	-	100	58.607	Octodon_degus
ENSDARG00000013382	cwc15	100	84.211	ENSONIG00000004326	cwc15	100	86.235	Oreochromis_niloticus
ENSDARG00000013382	cwc15	100	65.854	ENSOANG00000001673	-	100	62.602	Ornithorhynchus_anatinus
ENSDARG00000013382	cwc15	100	76.210	ENSOANG00000010404	-	100	77.016	Ornithorhynchus_anatinus
ENSDARG00000013382	cwc15	100	78.862	ENSOCUG00000001629	CWC15	100	78.862	Oryctolagus_cuniculus
ENSDARG00000013382	cwc15	100	90.688	ENSORLG00000008550	cwc15	85	88.259	Oryzias_latipes
ENSDARG00000013382	cwc15	100	87.045	ENSORLG00020002475	cwc15	85	87.854	Oryzias_latipes_hni
ENSDARG00000013382	cwc15	100	87.045	ENSORLG00015007291	cwc15	85	87.449	Oryzias_latipes_hsok
ENSDARG00000013382	cwc15	100	86.640	ENSOMEG00000000650	cwc15	100	87.854	Oryzias_melastigma
ENSDARG00000013382	cwc15	100	78.862	ENSOGAG00000001686	CWC15	100	78.862	Otolemur_garnettii
ENSDARG00000013382	cwc15	100	73.387	ENSOARG00000009316	-	100	77.016	Ovis_aries
ENSDARG00000013382	cwc15	91	54.911	ENSOARG00000016298	-	100	52.889	Ovis_aries
ENSDARG00000013382	cwc15	100	78.862	ENSPPAG00000033609	CWC15	100	78.862	Pan_paniscus
ENSDARG00000013382	cwc15	100	79.268	ENSPPRG00000005063	-	100	79.268	Panthera_pardus
ENSDARG00000013382	cwc15	100	70.565	ENSPPRG00000015290	-	100	74.194	Panthera_pardus
ENSDARG00000013382	cwc15	100	58.537	ENSPTIG00000021149	-	100	56.627	Panthera_tigris_altaica
ENSDARG00000013382	cwc15	61	86.047	ENSPTIG00000006844	-	88	86.047	Panthera_tigris_altaica
ENSDARG00000013382	cwc15	100	78.862	ENSPTRG00000044239	CWC15	100	78.862	Pan_troglodytes
ENSDARG00000013382	cwc15	100	78.862	ENSPANG00000019125	CWC15	100	78.862	Papio_anubis
ENSDARG00000013382	cwc15	100	82.591	ENSPKIG00000020021	cwc15	100	83.806	Paramormyrops_kingsleyae
ENSDARG00000013382	cwc15	100	77.733	ENSPSIG00000011569	CWC15	100	79.352	Pelodiscus_sinensis
ENSDARG00000013382	cwc15	77	91.304	ENSPMGG00000002740	cwc15	100	91.304	Periophthalmus_magnuspinnatus
ENSDARG00000013382	cwc15	100	78.455	ENSPEMG00000021432	Cwc15	100	78.455	Peromyscus_maniculatus_bairdii
ENSDARG00000013382	cwc15	67	68.263	ENSPMAG00000007890	cwc15	93	64.474	Petromyzon_marinus
ENSDARG00000013382	cwc15	100	76.613	ENSPCIG00000001348	CWC15	100	77.016	Phascolarctos_cinereus
ENSDARG00000013382	cwc15	100	84.211	ENSPFOG00000002621	cwc15	100	85.425	Poecilia_formosa
ENSDARG00000013382	cwc15	100	84.211	ENSPLAG00000022639	cwc15	100	85.425	Poecilia_latipinna
ENSDARG00000013382	cwc15	100	84.211	ENSPMEG00000001332	cwc15	100	91.304	Poecilia_mexicana
ENSDARG00000013382	cwc15	100	84.615	ENSPREG00000021919	cwc15	100	89.130	Poecilia_reticulata
ENSDARG00000013382	cwc15	100	78.862	ENSPPYG00000003785	CWC15	100	78.862	Pongo_abelii
ENSDARG00000013382	cwc15	100	64.634	ENSPCAG00000004205	CWC15	100	64.516	Procavia_capensis
ENSDARG00000013382	cwc15	100	78.862	ENSPCOG00000023913	CWC15	100	78.862	Propithecus_coquereli
ENSDARG00000013382	cwc15	100	73.387	ENSPVAG00000017517	CWC15	100	77.016	Pteropus_vampyrus
ENSDARG00000013382	cwc15	100	84.615	ENSPNYG00000019347	cwc15	100	85.830	Pundamilia_nyererei
ENSDARG00000013382	cwc15	57	83.688	ENSPNAG00000022563	cwc15	76	95.413	Pygocentrus_nattereri
ENSDARG00000013382	cwc15	100	78.455	ENSRNOG00000008490	Cwc15	100	78.455	Rattus_norvegicus
ENSDARG00000013382	cwc15	100	71.545	ENSRNOG00000025157	AABR07008904.1	100	73.984	Rattus_norvegicus
ENSDARG00000013382	cwc15	100	78.862	ENSRBIG00000030781	CWC15	100	78.862	Rhinopithecus_bieti
ENSDARG00000013382	cwc15	100	78.862	ENSRROG00000037199	CWC15	100	78.862	Rhinopithecus_roxellana
ENSDARG00000013382	cwc15	99	56.790	ENSSBOG00000033926	-	99	55.144	Saimiri_boliviensis_boliviensis
ENSDARG00000013382	cwc15	100	62.097	ENSSBOG00000035727	-	100	62.097	Saimiri_boliviensis_boliviensis
ENSDARG00000013382	cwc15	100	78.862	ENSSBOG00000006158	-	100	78.862	Saimiri_boliviensis_boliviensis
ENSDARG00000013382	cwc15	100	73.577	ENSSHAG00000000335	-	100	72.358	Sarcophilus_harrisii
ENSDARG00000013382	cwc15	100	76.613	ENSSHAG00000016534	-	100	77.419	Sarcophilus_harrisii
ENSDARG00000013382	cwc15	100	82.591	ENSSFOG00015011833	cwc15	100	84.211	Scleropages_formosus
ENSDARG00000013382	cwc15	100	83.401	ENSSMAG00000016275	cwc15	100	86.235	Scophthalmus_maximus
ENSDARG00000013382	cwc15	100	86.400	ENSSDUG00000012642	cwc15	100	88.000	Seriola_dumerili
ENSDARG00000013382	cwc15	100	86.056	ENSSLDG00000016292	cwc15	100	87.649	Seriola_lalandi_dorsalis
ENSDARG00000013382	cwc15	99	38.843	ENSSARG00000004113	-	99	35.685	Sorex_araneus
ENSDARG00000013382	cwc15	93	63.877	ENSSPUG00000004441	CWC15	99	64.317	Sphenodon_punctatus
ENSDARG00000013382	cwc15	100	84.615	ENSSPAG00000004630	cwc15	100	87.045	Stegastes_partitus
ENSDARG00000013382	cwc15	100	73.387	ENSSSCG00000014961	CWC15	100	76.613	Sus_scrofa
ENSDARG00000013382	cwc15	100	76.113	ENSTGUG00000012817	CWC15	100	76.518	Taeniopygia_guttata
ENSDARG00000013382	cwc15	100	83.333	ENSTRUG00000015508	cwc15	100	86.585	Takifugu_rubripes
ENSDARG00000013382	cwc15	100	80.400	ENSTNIG00000011790	cwc15	100	78.800	Tetraodon_nigroviridis
ENSDARG00000013382	cwc15	59	86.441	ENSTBEG00000014319	CWC15	69	82.716	Tupaia_belangeri
ENSDARG00000013382	cwc15	100	65.447	ENSTTRG00000004922	CWC15	100	68.293	Tursiops_truncatus
ENSDARG00000013382	cwc15	100	74.089	ENSUAMG00000026040	CWC15	100	78.138	Ursus_americanus
ENSDARG00000013382	cwc15	100	73.387	ENSUMAG00000007161	CWC15	100	77.016	Ursus_maritimus
ENSDARG00000013382	cwc15	100	73.790	ENSVPAG00000005841	CWC15	100	77.419	Vicugna_pacos
ENSDARG00000013382	cwc15	100	72.065	ENSVVUG00000011648	-	100	75.304	Vulpes_vulpes
ENSDARG00000013382	cwc15	100	75.000	ENSVVUG00000012624	-	100	73.790	Vulpes_vulpes
ENSDARG00000013382	cwc15	100	78.455	ENSXETG00000007076	cwc15	100	78.049	Xenopus_tropicalis
ENSDARG00000013382	cwc15	100	83.401	ENSXCOG00000006310	cwc15	100	91.304	Xiphophorus_couchianus
ENSDARG00000013382	cwc15	100	84.211	ENSXMAG00000011472	cwc15	100	91.304	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process
GO:0071007	U2-type catalytic step 2 spliceosome	-	ISS	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component