EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000013734 (Gene tree)
Gene ID: 449786
Gene Symbol: polr3glb
Alias: polr3gl|zgc:101891
Full Name: polymerase (RNA) III (DNA directed) polypeptide G like b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 13663 bases
Position: chr16:42829735-42843397
Accession: ZDB-GENE-041010-32
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000010083	RNA_pol_3_Rpc31	PF11705.8	5e-34	1	1
ENSDARP00000130817	RNA_pol_3_Rpc31	PF11705.8	6.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000159730	-	639	-	ENSDARP00000130817	212 (aa)	-	A0A0R4IA01
ENSDART00000014956	-	1249	-	ENSDARP00000010083	213 (aa)	-	F1R2W0

Gene Model

Click here to download ENSDARG00000013734's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000013734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000013734	polr3glb	100	46.330	ENSDARG00000024687	polr3g	100	44.749
ENSDARG00000013734	polr3glb	100	53.881	ENSDARG00000012044	polr3gla	99	55.251

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000013734	polr3glb	97	80.000	ENSAMXG00000001802	polr3glb	97	80.476	Astyanax_mexicanus
ENSDARG00000013734	polr3glb	100	52.055	ENSAMXG00000031351	polr3gla	100	54.795	Astyanax_mexicanus
ENSDARG00000013734	polr3glb	97	63.768	ENSCPBG00000007959	-	97	65.403	Chrysemys_picta_bellii
ENSDARG00000013734	polr3glb	96	71.362	ENSELUG00000008311	polr3glb	97	71.689	Esox_lucius
ENSDARG00000013734	polr3glb	97	62.136	ENSELUG00000013880	polr3gla	97	61.611	Esox_lucius
ENSDARG00000013734	polr3glb	96	53.589	ENSIPUG00000018691	polr3gla	97	53.953	Ictalurus_punctatus
ENSDARG00000013734	polr3glb	100	78.241	ENSIPUG00000003803	polr3gl	100	78.241	Ictalurus_punctatus
ENSDARG00000013734	polr3glb	97	66.505	ENSLACG00000013217	-	96	66.825	Latimeria_chalumnae
ENSDARG00000013734	polr3glb	97	71.359	ENSLOCG00000008195	polr3glb	96	72.512	Lepisosteus_oculatus
ENSDARG00000013734	polr3glb	97	66.505	ENSPSIG00000010726	-	97	68.246	Pelodiscus_sinensis
ENSDARG00000013734	polr3glb	97	80.488	ENSPNAG00000000732	polr3glb	97	80.952	Pygocentrus_nattereri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006383	transcription by RNA polymerase III	-	IEA	Process