EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000014139 (Gene tree)
Gene ID: 327335
Gene Symbol: srp72
Alias: wu:fi03d11
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 25083 bases
Position: chr14:1203608-1228690
Accession: ZDB-GENE-030131-5546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000015026	SRP72	PF08492.12	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000018981	-	2373	XM_017359078	ENSDARP00000015026	595 (aa)	XP_017214567	F1QDJ9

Gene Model

Click here to download ENSDARG00000014139's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000014139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000014139	srp72	97	77.296	ENSG00000174780	SRP72	85	77.193	Homo_sapiens
ENSDARG00000014139	srp72	99	71.717	ENSAPOG00000019438	srp72	83	71.579	Acanthochromis_polyacanthus
ENSDARG00000014139	srp72	97	77.816	ENSAMEG00000008469	SRP72	85	77.895	Ailuropoda_melanoleuca
ENSDARG00000014139	srp72	99	81.711	ENSACIG00000000488	srp72	85	81.993	Amphilophus_citrinellus
ENSDARG00000014139	srp72	99	82.828	ENSAOCG00000011256	srp72	85	83.333	Amphiprion_ocellaris
ENSDARG00000014139	srp72	99	83.165	ENSAPEG00000001512	srp72	85	83.158	Amphiprion_percula
ENSDARG00000014139	srp72	91	84.815	ENSATEG00000006781	srp72	88	84.815	Anabas_testudineus
ENSDARG00000014139	srp72	100	75.168	ENSAPLG00000008751	SRP72	85	75.874	Anas_platyrhynchos
ENSDARG00000014139	srp72	97	76.776	ENSACAG00000002381	SRP72	84	77.018	Anolis_carolinensis
ENSDARG00000014139	srp72	95	76.377	ENSANAG00000020836	-	84	76.377	Aotus_nancymaae
ENSDARG00000014139	srp72	99	83.165	ENSACLG00000014617	srp72	85	83.509	Astatotilapia_calliptera
ENSDARG00000014139	srp72	97	86.897	ENSAMXG00000004011	srp72	85	87.215	Astyanax_mexicanus
ENSDARG00000014139	srp72	97	76.083	ENSBTAG00000010593	SRP72	85	76.140	Bos_taurus
ENSDARG00000014139	srp72	96	30.479	WBGene00017245	srpa-72	86	31.315	Caenorhabditis_elegans
ENSDARG00000014139	srp72	97	76.776	ENSCJAG00000017998	SRP72	85	76.667	Callithrix_jacchus
ENSDARG00000014139	srp72	97	77.816	ENSCAFG00000002244	SRP72	85	77.895	Canis_familiaris
ENSDARG00000014139	srp72	97	77.816	ENSCAFG00020027338	SRP72	96	76.883	Canis_lupus_dingo
ENSDARG00000014139	srp72	97	73.921	ENSCHIG00000021465	SRP72	85	73.951	Capra_hircus
ENSDARG00000014139	srp72	97	77.816	ENSTSYG00000010571	-	84	77.719	Carlito_syrichta
ENSDARG00000014139	srp72	90	61.152	ENSCAPG00000016668	SRP72	89	64.255	Cavia_aperea
ENSDARG00000014139	srp72	97	77.123	ENSCPOG00000000218	SRP72	85	77.018	Cavia_porcellus
ENSDARG00000014139	srp72	95	76.732	ENSCCAG00000030683	-	84	76.732	Cebus_capucinus
ENSDARG00000014139	srp72	97	75.390	ENSCCAG00000030830	-	85	75.263	Cebus_capucinus
ENSDARG00000014139	srp72	97	77.123	ENSCATG00000008072	SRP72	87	77.018	Cercocebus_atys
ENSDARG00000014139	srp72	98	62.995	ENSCATG00000045359	-	84	62.982	Cercocebus_atys
ENSDARG00000014139	srp72	97	76.776	ENSCLAG00000003571	SRP72	85	76.842	Chinchilla_lanigera
ENSDARG00000014139	srp72	97	71.750	ENSCSAG00000005079	SRP72	85	71.579	Chlorocebus_sabaeus
ENSDARG00000014139	srp72	88	79.487	ENSCHOG00000013240	SRP72	74	79.487	Choloepus_hoffmanni
ENSDARG00000014139	srp72	97	77.643	ENSCPBG00000015015	SRP72	85	78.070	Chrysemys_picta_bellii
ENSDARG00000014139	srp72	96	41.681	ENSCING00000002417	-	85	41.426	Ciona_intestinalis
ENSDARG00000014139	srp72	89	45.324	ENSCSAVG00000011288	-	91	45.324	Ciona_savignyi
ENSDARG00000014139	srp72	97	77.123	ENSCANG00000041709	SRP72	87	77.018	Colobus_angolensis_palliatus
ENSDARG00000014139	srp72	99	53.220	ENSCANG00000037920	-	82	54.497	Colobus_angolensis_palliatus
ENSDARG00000014139	srp72	99	76.263	ENSCGRG00001013548	Srp72	85	77.018	Cricetulus_griseus_chok1gshd
ENSDARG00000014139	srp72	99	76.263	ENSCGRG00000003013	Srp72	89	77.018	Cricetulus_griseus_crigri
ENSDARG00000014139	srp72	97	82.729	ENSCSEG00000003616	srp72	87	83.158	Cynoglossus_semilaevis
ENSDARG00000014139	srp72	90	82.959	ENSCVAG00000001520	srp72	88	82.959	Cyprinodon_variegatus
ENSDARG00000014139	srp72	97	72.193	ENSDNOG00000039012	SRP72	70	72.378	Dasypus_novemcinctus
ENSDARG00000014139	srp72	97	77.643	ENSDORG00000000171	Srp72	85	77.544	Dipodomys_ordii
ENSDARG00000014139	srp72	96	40.933	FBgn0038810	Srp72	86	40.933	Drosophila_melanogaster
ENSDARG00000014139	srp72	97	78.163	ENSETEG00000005191	SRP72	85	78.070	Echinops_telfairi
ENSDARG00000014139	srp72	84	62.205	ENSEBUG00000003696	srp72	95	62.205	Eptatretus_burgeri
ENSDARG00000014139	srp72	97	77.643	ENSEASG00005017747	SRP72	85	77.544	Equus_asinus_asinus
ENSDARG00000014139	srp72	97	77.643	ENSECAG00000006920	SRP72	85	77.544	Equus_caballus
ENSDARG00000014139	srp72	100	82.274	ENSELUG00000022415	srp72	95	82.453	Esox_lucius
ENSDARG00000014139	srp72	97	77.816	ENSFCAG00000027600	SRP72	85	77.895	Felis_catus
ENSDARG00000014139	srp72	97	77.547	ENSFALG00000006713	SRP72	85	77.448	Ficedula_albicollis
ENSDARG00000014139	srp72	96	49.738	ENSFDAG00000009793	-	82	49.639	Fukomys_damarensis
ENSDARG00000014139	srp72	97	76.776	ENSFDAG00000002014	-	85	76.667	Fukomys_damarensis
ENSDARG00000014139	srp72	99	81.650	ENSFHEG00000017652	srp72	79	81.930	Fundulus_heteroclitus
ENSDARG00000014139	srp72	98	76.976	ENSGMOG00000005986	srp72	85	77.622	Gadus_morhua
ENSDARG00000014139	srp72	97	77.509	ENSGALG00000011403	SRP72	85	77.583	Gallus_gallus
ENSDARG00000014139	srp72	99	81.650	ENSGAFG00000017762	srp72	85	81.930	Gambusia_affinis
ENSDARG00000014139	srp72	99	82.017	ENSGACG00000016749	srp72	85	82.137	Gasterosteus_aculeatus
ENSDARG00000014139	srp72	97	77.470	ENSGAGG00000024611	SRP72	94	77.544	Gopherus_agassizii
ENSDARG00000014139	srp72	97	76.950	ENSGGOG00000013234	-	85	76.842	Gorilla_gorilla
ENSDARG00000014139	srp72	99	82.997	ENSHBUG00000020723	srp72	85	83.333	Haplochromis_burtoni
ENSDARG00000014139	srp72	84	72.667	ENSHGLG00000003950	-	81	72.667	Heterocephalus_glaber_female
ENSDARG00000014139	srp72	97	71.924	ENSHGLG00000005029	-	84	71.404	Heterocephalus_glaber_female
ENSDARG00000014139	srp72	85	68.966	ENSHGLG00000010633	-	83	70.492	Heterocephalus_glaber_female
ENSDARG00000014139	srp72	97	76.776	ENSHGLG00000009791	SRP72	85	76.667	Heterocephalus_glaber_female
ENSDARG00000014139	srp72	57	59.649	ENSHGLG00000003496	-	95	60.000	Heterocephalus_glaber_female
ENSDARG00000014139	srp72	96	60.209	ENSHGLG00000018597	-	85	60.424	Heterocephalus_glaber_female
ENSDARG00000014139	srp72	97	71.924	ENSHGLG00100011236	-	84	71.404	Heterocephalus_glaber_male
ENSDARG00000014139	srp72	97	76.776	ENSHGLG00100009021	SRP72	85	76.667	Heterocephalus_glaber_male
ENSDARG00000014139	srp72	84	72.667	ENSHGLG00100017133	-	81	72.667	Heterocephalus_glaber_male
ENSDARG00000014139	srp72	94	56.838	ENSHGLG00100009346	-	83	58.082	Heterocephalus_glaber_male
ENSDARG00000014139	srp72	97	81.976	ENSHCOG00000013760	srp72	85	82.394	Hippocampus_comes
ENSDARG00000014139	srp72	99	85.354	ENSIPUG00000000210	srp72	85	85.263	Ictalurus_punctatus
ENSDARG00000014139	srp72	97	77.296	ENSSTOG00000007305	SRP72	85	77.193	Ictidomys_tridecemlineatus
ENSDARG00000014139	srp72	97	77.163	ENSJJAG00000018324	Srp72	84	77.018	Jaculus_jaculus
ENSDARG00000014139	srp72	99	80.808	ENSKMAG00000003776	srp72	85	80.877	Kryptolebias_marmoratus
ENSDARG00000014139	srp72	97	83.966	ENSLOCG00000002628	srp72	85	84.238	Lepisosteus_oculatus
ENSDARG00000014139	srp72	97	77.123	ENSLAFG00000018307	SRP72	85	77.018	Loxodonta_africana
ENSDARG00000014139	srp72	97	77.123	ENSMFAG00000031065	SRP72	87	77.018	Macaca_fascicularis
ENSDARG00000014139	srp72	98	63.511	ENSMFAG00000037164	-	87	64.211	Macaca_fascicularis
ENSDARG00000014139	srp72	98	76.592	ENSMMUG00000016368	SRP72	85	77.018	Macaca_mulatta
ENSDARG00000014139	srp72	95	60.105	ENSMMUG00000021262	-	93	60.250	Macaca_mulatta
ENSDARG00000014139	srp72	97	77.123	ENSMNEG00000038065	-	85	77.018	Macaca_nemestrina
ENSDARG00000014139	srp72	95	75.311	ENSMLEG00000030140	-	84	74.600	Mandrillus_leucophaeus
ENSDARG00000014139	srp72	99	82.492	ENSMAMG00000014989	srp72	75	82.632	Mastacembelus_armatus
ENSDARG00000014139	srp72	99	83.165	ENSMZEG00005003325	srp72	85	83.509	Maylandia_zebra
ENSDARG00000014139	srp72	97	73.183	ENSMGAG00000008567	SRP72	95	74.664	Meleagris_gallopavo
ENSDARG00000014139	srp72	99	76.263	ENSMAUG00000001237	Srp72	85	77.018	Mesocricetus_auratus
ENSDARG00000014139	srp72	95	76.377	ENSMICG00000008507	-	84	76.377	Microcebus_murinus
ENSDARG00000014139	srp72	99	75.926	ENSMOCG00000020309	Srp72	85	76.667	Microtus_ochrogaster
ENSDARG00000014139	srp72	99	81.987	ENSMMOG00000002627	srp72	85	82.105	Mola_mola
ENSDARG00000014139	srp72	97	72.491	ENSMODG00000020697	SRP72	85	72.329	Monodelphis_domestica
ENSDARG00000014139	srp72	99	82.828	ENSMALG00000003747	srp72	94	82.807	Monopterus_albus
ENSDARG00000014139	srp72	99	75.758	MGP_CAROLIEiJ_G0027323	Srp72	85	76.491	Mus_caroli
ENSDARG00000014139	srp72	99	75.758	ENSMUSG00000036323	Srp72	85	76.491	Mus_musculus
ENSDARG00000014139	srp72	99	76.263	MGP_PahariEiJ_G0017103	Srp72	84	77.018	Mus_pahari
ENSDARG00000014139	srp72	99	75.758	MGP_SPRETEiJ_G0028317	Srp72	85	76.491	Mus_spretus
ENSDARG00000014139	srp72	97	77.643	ENSMPUG00000004828	SRP72	85	77.719	Mustela_putorius_furo
ENSDARG00000014139	srp72	97	77.336	ENSMLUG00000007344	SRP72	84	77.408	Myotis_lucifugus
ENSDARG00000014139	srp72	99	76.599	ENSNGAG00000012595	Srp72	85	77.193	Nannospalax_galili
ENSDARG00000014139	srp72	99	78.451	ENSNBRG00000014492	srp72	85	78.596	Neolamprologus_brichardi
ENSDARG00000014139	srp72	97	71.972	ENSNLEG00000008806	-	82	77.206	Nomascus_leucogenys
ENSDARG00000014139	srp72	86	74.760	ENSMEUG00000005164	SRP72	75	74.760	Notamacropus_eugenii
ENSDARG00000014139	srp72	97	76.298	ENSOPRG00000012521	SRP72	85	76.140	Ochotona_princeps
ENSDARG00000014139	srp72	97	76.430	ENSODEG00000012214	SRP72	86	76.491	Octodon_degus
ENSDARG00000014139	srp72	99	83.165	ENSONIG00000001446	srp72	85	83.509	Oreochromis_niloticus
ENSDARG00000014139	srp72	97	61.565	ENSOANG00000008562	SRP72	84	61.274	Ornithorhynchus_anatinus
ENSDARG00000014139	srp72	97	76.990	ENSOCUG00000012226	SRP72	85	77.018	Oryctolagus_cuniculus
ENSDARG00000014139	srp72	99	80.135	ENSORLG00000020418	srp72	85	80.877	Oryzias_latipes
ENSDARG00000014139	srp72	99	79.461	ENSORLG00020009138	srp72	84	78.421	Oryzias_latipes_hni
ENSDARG00000014139	srp72	99	79.461	ENSORLG00015018251	srp72	85	80.175	Oryzias_latipes_hsok
ENSDARG00000014139	srp72	99	79.630	ENSOMEG00000022008	srp72	85	80.702	Oryzias_melastigma
ENSDARG00000014139	srp72	97	76.950	ENSOGAG00000003578	SRP72	85	77.193	Otolemur_garnettii
ENSDARG00000014139	srp72	97	76.256	ENSOARG00000004329	SRP72	85	76.316	Ovis_aries
ENSDARG00000014139	srp72	90	61.194	ENSPPAG00000032490	-	91	60.926	Pan_paniscus
ENSDARG00000014139	srp72	98	54.561	ENSPPAG00000011428	-	80	55.263	Pan_paniscus
ENSDARG00000014139	srp72	97	77.296	ENSPPAG00000042265	SRP72	88	77.193	Pan_paniscus
ENSDARG00000014139	srp72	97	77.816	ENSPPRG00000015991	SRP72	85	77.895	Panthera_pardus
ENSDARG00000014139	srp72	97	77.816	ENSPTIG00000018786	SRP72	85	77.895	Panthera_tigris_altaica
ENSDARG00000014139	srp72	98	56.627	ENSPTRG00000048100	-	81	57.368	Pan_troglodytes
ENSDARG00000014139	srp72	97	77.296	ENSPTRG00000048466	-	85	77.193	Pan_troglodytes
ENSDARG00000014139	srp72	90	61.007	ENSPTRG00000043609	-	94	59.187	Pan_troglodytes
ENSDARG00000014139	srp72	96	62.609	ENSPANG00000030230	-	88	63.121	Papio_anubis
ENSDARG00000014139	srp72	97	77.123	ENSPANG00000005495	SRP72	87	77.018	Papio_anubis
ENSDARG00000014139	srp72	97	78.336	ENSPSIG00000003003	SRP72	89	78.421	Pelodiscus_sinensis
ENSDARG00000014139	srp72	99	75.926	ENSPEMG00000012828	-	84	76.667	Peromyscus_maniculatus_bairdii
ENSDARG00000014139	srp72	97	76.083	ENSPCIG00000000732	SRP72	84	76.140	Phascolarctos_cinereus
ENSDARG00000014139	srp72	99	81.650	ENSPFOG00000003480	srp72	85	81.930	Poecilia_formosa
ENSDARG00000014139	srp72	99	81.818	ENSPLAG00000020122	srp72	85	82.105	Poecilia_latipinna
ENSDARG00000014139	srp72	99	81.481	ENSPMEG00000019988	srp72	96	78.300	Poecilia_mexicana
ENSDARG00000014139	srp72	99	81.818	ENSPREG00000006218	srp72	85	82.105	Poecilia_reticulata
ENSDARG00000014139	srp72	64	62.304	ENSPPYG00000009152	-	93	63.564	Pongo_abelii
ENSDARG00000014139	srp72	97	77.296	ENSPPYG00000014752	-	66	77.193	Pongo_abelii
ENSDARG00000014139	srp72	97	75.910	ENSPVAG00000005590	SRP72	84	75.965	Pteropus_vampyrus
ENSDARG00000014139	srp72	99	83.333	ENSPNYG00000001916	srp72	85	83.684	Pundamilia_nyererei
ENSDARG00000014139	srp72	100	86.555	ENSPNAG00000022424	srp72	85	86.690	Pygocentrus_nattereri
ENSDARG00000014139	srp72	99	73.906	ENSRNOG00000002100	LOC108348180	85	74.912	Rattus_norvegicus
ENSDARG00000014139	srp72	96	76.655	ENSRBIG00000042069	SRP72	87	76.316	Rhinopithecus_bieti
ENSDARG00000014139	srp72	98	60.997	ENSRBIG00000029328	-	84	63.008	Rhinopithecus_bieti
ENSDARG00000014139	srp72	97	77.123	ENSRROG00000035704	SRP72	87	77.018	Rhinopithecus_roxellana
ENSDARG00000014139	srp72	97	76.083	ENSSHAG00000000614	SRP72	84	76.140	Sarcophilus_harrisii
ENSDARG00000014139	srp72	100	83.361	ENSSFOG00015002026	srp72	85	83.713	Scleropages_formosus
ENSDARG00000014139	srp72	99	81.208	ENSSMAG00000007639	srp72	85	81.818	Scophthalmus_maximus
ENSDARG00000014139	srp72	99	83.502	ENSSDUG00000007345	srp72	84	83.860	Seriola_dumerili
ENSDARG00000014139	srp72	99	83.502	ENSSLDG00000021819	srp72	85	82.632	Seriola_lalandi_dorsalis
ENSDARG00000014139	srp72	70	79.487	ENSSARG00000005804	SRP72	61	79.487	Sorex_araneus
ENSDARG00000014139	srp72	97	77.990	ENSSPUG00000009740	SRP72	85	78.070	Sphenodon_punctatus
ENSDARG00000014139	srp72	99	82.660	ENSSPAG00000011565	srp72	85	83.333	Stegastes_partitus
ENSDARG00000014139	srp72	99	73.737	ENSSSCG00000008900	SRP72	84	74.386	Sus_scrofa
ENSDARG00000014139	srp72	97	77.586	ENSTGUG00000004767	SRP72	85	77.487	Taeniopygia_guttata
ENSDARG00000014139	srp72	97	79.620	ENSTRUG00000009831	srp72	85	79.649	Takifugu_rubripes
ENSDARG00000014139	srp72	99	81.313	ENSTNIG00000013073	srp72	85	81.228	Tetraodon_nigroviridis
ENSDARG00000014139	srp72	86	79.487	ENSTBEG00000007394	SRP72	75	79.487	Tupaia_belangeri
ENSDARG00000014139	srp72	97	76.603	ENSTTRG00000010945	SRP72	90	76.667	Tursiops_truncatus
ENSDARG00000014139	srp72	65	76.623	ENSUAMG00000001701	SRP72	94	77.333	Ursus_americanus
ENSDARG00000014139	srp72	97	77.643	ENSUMAG00000008151	SRP72	85	77.719	Ursus_maritimus
ENSDARG00000014139	srp72	97	75.910	ENSVPAG00000000458	SRP72	85	75.965	Vicugna_pacos
ENSDARG00000014139	srp72	97	77.643	ENSVVUG00000006020	SRP72	85	77.719	Vulpes_vulpes
ENSDARG00000014139	srp72	100	73.782	ENSXETG00000010205	srp72	90	74.431	Xenopus_tropicalis
ENSDARG00000014139	srp72	99	81.313	ENSXMAG00000018000	srp72	85	81.579	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	-	IEA	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	21873635.	IBA	Component
GO:0005786	signal recognition particle, endoplasmic reticulum targeting	-	IEA	Component
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	IEA	Process
GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation	21873635.	IBA	Process
GO:0008312	7S RNA binding	-	IEA	Function
GO:0048500	signal recognition particle	-	IEA	Component