EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000014340 (Gene tree)
Gene ID: 386994
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: RAB11a%2C member RAS oncogene family%2C like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 16693 bases
Position: chr16:46725087-46741779
Accession: ZDB-GENE-031118-188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000016540	MMR_HSR1	PF01926.23	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000008920	-	1647	-	ENSDARP00000016540	216 (aa)	-	F1RDZ1

Gene Model

Click here to download ENSDARG00000014340's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000014340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000014340	rab11al	72	40.994	ENSDARG00000045027	rab9a	80	40.994
ENSDARG00000014340	rab11al	73	36.943	ENSDARG00000029885	rab41	74	36.943
ENSDARG00000014340	rab11al	97	37.089	ENSDARG00000102580	CU571310.1	98	37.089
ENSDARG00000014340	rab11al	70	34.194	ENSDARG00000010844	kras	91	33.714
ENSDARG00000014340	rab11al	95	40.191	ENSDARG00000034215	rab42a	97	40.191
ENSDARG00000014340	rab11al	96	46.860	ENSDARG00000029663	rab1ab	99	46.860
ENSDARG00000014340	rab11al	81	44.318	ENSDARG00000037884	rab30	88	44.318
ENSDARG00000014340	rab11al	76	35.329	ENSDARG00000100379	si:dkey-34d22.2	90	35.329
ENSDARG00000014340	rab11al	70	31.373	ENSDARG00000006553	rras	84	32.727
ENSDARG00000014340	rab11al	78	39.306	ENSDARG00000020497	rab7a	82	39.306
ENSDARG00000014340	rab11al	77	46.746	ENSDARG00000019312	rab39ba	79	46.746
ENSDARG00000014340	rab11al	81	52.874	ENSDARG00000074246	rab14	81	52.874
ENSDARG00000014340	rab11al	73	36.943	ENSDARG00000031343	rab6bb	75	36.943
ENSDARG00000014340	rab11al	72	31.013	ENSDARG00000075285	si:ch73-116o1.2	88	32.240
ENSDARG00000014340	rab11al	75	46.012	ENSDARG00000007257	rab5ab	75	46.012
ENSDARG00000014340	rab11al	93	34.434	ENSDARG00000014058	rab36	79	34.434
ENSDARG00000014340	rab11al	96	48.792	ENSDARG00000056479	rab1bb	99	48.792
ENSDARG00000014340	rab11al	81	34.637	ENSDARG00000026098	si:dkey-13a21.4	87	34.637
ENSDARG00000014340	rab11al	94	31.963	ENSDARG00000045628	rab34a	79	31.963
ENSDARG00000014340	rab11al	94	42.512	ENSDARG00000036501	rab39bb	96	42.512
ENSDARG00000014340	rab11al	79	36.957	ENSDARG00000052290	rab33ba	76	36.957
ENSDARG00000014340	rab11al	75	44.512	ENSDARG00000055291	rab18a	80	44.512
ENSDARG00000014340	rab11al	66	37.762	ENSDARG00000004151	rab23	68	37.654
ENSDARG00000014340	rab11al	73	36.943	ENSDARG00000103714	rab6a	75	36.943
ENSDARG00000014340	rab11al	75	40.120	ENSDARG00000103391	rab9b	82	40.120
ENSDARG00000014340	rab11al	99	61.682	ENSDARG00000058800	rab25a	99	61.682
ENSDARG00000014340	rab11al	73	42.038	ENSDARG00000015807	rab22a	80	42.038
ENSDARG00000014340	rab11al	76	34.337	ENSDARG00000005651	hrasb	98	34.965
ENSDARG00000014340	rab11al	73	30.189	ENSDARG00000062865	mras	86	30.909
ENSDARG00000014340	rab11al	78	48.256	ENSDARG00000102078	CABZ01072548.1	87	48.256
ENSDARG00000014340	rab11al	96	40.097	ENSDARG00000058425	rab35b	99	41.706
ENSDARG00000014340	rab11al	94	43.204	ENSDARG00000018602	rab5aa	90	43.204
ENSDARG00000014340	rab11al	75	39.521	ENSDARG00000057394	rab33a	71	39.521
ENSDARG00000014340	rab11al	75	30.636	ENSDARG00000046013	rasl11a	68	30.636
ENSDARG00000014340	rab11al	81	37.569	ENSDARG00000003257	zgc:101559	78	37.569
ENSDARG00000014340	rab11al	99	62.911	ENSDARG00000052954	rab25b	99	62.911
ENSDARG00000014340	rab11al	70	35.526	ENSDARG00000013161	zgc:55558	87	36.585
ENSDARG00000014340	rab11al	79	45.029	ENSDARG00000098344	rab18b	83	45.029
ENSDARG00000014340	rab11al	76	51.515	ENSDARG00000103934	megf8	95	51.515
ENSDARG00000014340	rab11al	99	86.512	ENSDARG00000041450	rab11a	99	86.512
ENSDARG00000014340	rab11al	73	39.877	ENSDARG00000087243	zgc:100918	79	39.877
ENSDARG00000014340	rab11al	81	34.483	ENSDARG00000034522	rab6ba	84	34.483
ENSDARG00000014340	rab11al	69	36.000	ENSDARG00000098497	hrasa	85	37.037
ENSDARG00000014340	rab11al	99	81.106	ENSDARG00000041878	rab11ba	99	81.106
ENSDARG00000014340	rab11al	99	80.184	ENSDARG00000090086	rab11bb	99	80.184
ENSDARG00000014340	rab11al	83	43.889	ENSDARG00000037967	si:dkey-16l2.16	95	48.696
ENSDARG00000014340	rab11al	50	49.091	ENSDARG00000099205	CABZ01081908.1	96	49.091
ENSDARG00000014340	rab11al	71	33.766	ENSDARG00000063321	rabl2	68	33.766
ENSDARG00000014340	rab11al	96	46.860	ENSDARG00000052263	rab1aa	99	46.860
ENSDARG00000014340	rab11al	88	34.314	ENSDARG00000010977	rab34b	80	35.814
ENSDARG00000014340	rab11al	79	54.386	ENSDARG00000020261	rab2a	81	54.386
ENSDARG00000014340	rab11al	76	44.848	ENSDARG00000089428	rab12	70	44.848
ENSDARG00000014340	rab11al	94	44.059	ENSDARG00000034771	rab13	97	44.059
ENSDARG00000014340	rab11al	78	52.976	ENSDARG00000033056	zgc:171927	80	52.976
ENSDARG00000014340	rab11al	77	44.578	ENSDARG00000026484	rab15	78	44.578
ENSDARG00000014340	rab11al	66	41.259	ENSDARG00000018107	rab3da	85	41.259
ENSDARG00000014340	rab11al	82	39.548	ENSDARG00000114797	rab3b	82	39.548
ENSDARG00000014340	rab11al	73	41.104	ENSDARG00000021287	rab7b	79	41.104
ENSDARG00000014340	rab11al	77	52.695	ENSDARG00000035188	rab14l	78	52.695
ENSDARG00000014340	rab11al	96	48.309	ENSDARG00000058044	rab1ba	100	47.805
ENSDARG00000014340	rab11al	75	34.337	ENSDARG00000038225	nras	91	35.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000014340	rab11al	100	90.278	ENSAPOG00000008251	rab11al	100	90.278	Acanthochromis_polyacanthus
ENSDARG00000014340	rab11al	100	91.667	ENSACIG00000017403	rab11al	100	91.667	Amphilophus_citrinellus
ENSDARG00000014340	rab11al	100	92.130	ENSAOCG00000015678	rab11al	100	92.130	Amphiprion_ocellaris
ENSDARG00000014340	rab11al	100	92.130	ENSAPEG00000022135	rab11al	100	92.130	Amphiprion_percula
ENSDARG00000014340	rab11al	100	90.741	ENSATEG00000006156	rab11al	100	90.741	Anabas_testudineus
ENSDARG00000014340	rab11al	100	92.593	ENSACLG00000010268	rab11al	100	92.593	Astatotilapia_calliptera
ENSDARG00000014340	rab11al	94	86.700	ENSAMXG00000024632	rab11al	93	86.700	Astyanax_mexicanus
ENSDARG00000014340	rab11al	94	82.673	ENSCPBG00000025819	-	99	82.673	Chrysemys_picta_bellii
ENSDARG00000014340	rab11al	100	90.741	ENSCSEG00000011996	rab11al	100	90.741	Cynoglossus_semilaevis
ENSDARG00000014340	rab11al	100	89.352	ENSCVAG00000020016	rab11al	100	89.352	Cyprinodon_variegatus
ENSDARG00000014340	rab11al	100	92.593	ENSELUG00000012035	rab11al	100	92.593	Esox_lucius
ENSDARG00000014340	rab11al	99	81.860	ENSFALG00000002594	-	91	81.860	Ficedula_albicollis
ENSDARG00000014340	rab11al	95	91.262	ENSFHEG00000000832	rab11al	99	91.262	Fundulus_heteroclitus
ENSDARG00000014340	rab11al	94	88.119	ENSGMOG00000006450	rab11al	100	88.119	Gadus_morhua
ENSDARG00000014340	rab11al	99	80.000	ENSGALG00000037802	-	50	80.000	Gallus_gallus
ENSDARG00000014340	rab11al	100	89.815	ENSGAFG00000021725	rab11al	100	89.815	Gambusia_affinis
ENSDARG00000014340	rab11al	100	91.667	ENSGACG00000013259	rab11al	100	91.667	Gasterosteus_aculeatus
ENSDARG00000014340	rab11al	99	83.256	ENSGAGG00000020702	-	99	83.256	Gopherus_agassizii
ENSDARG00000014340	rab11al	100	92.593	ENSHBUG00000009333	rab11al	100	92.593	Haplochromis_burtoni
ENSDARG00000014340	rab11al	100	90.741	ENSHCOG00000000232	rab11al	100	90.741	Hippocampus_comes
ENSDARG00000014340	rab11al	100	94.444	ENSIPUG00000006091	RAB11A	100	94.444	Ictalurus_punctatus
ENSDARG00000014340	rab11al	100	87.500	ENSKMAG00000015516	rab11al	100	87.500	Kryptolebias_marmoratus
ENSDARG00000014340	rab11al	100	90.741	ENSLBEG00000016417	rab11al	100	90.741	Labrus_bergylta
ENSDARG00000014340	rab11al	99	82.326	ENSLACG00000011380	rab11al	99	82.326	Latimeria_chalumnae
ENSDARG00000014340	rab11al	100	93.519	ENSLOCG00000008865	rab11al	100	93.519	Lepisosteus_oculatus
ENSDARG00000014340	rab11al	100	92.130	ENSMAMG00000010278	rab11al	100	92.130	Mastacembelus_armatus
ENSDARG00000014340	rab11al	100	92.593	ENSMZEG00005017514	rab11al	100	92.593	Maylandia_zebra
ENSDARG00000014340	rab11al	74	88.750	ENSMGAG00000004720	-	95	88.750	Meleagris_gallopavo
ENSDARG00000014340	rab11al	79	97.647	ENSMMOG00000017117	rab11al	83	97.647	Mola_mola
ENSDARG00000014340	rab11al	100	90.278	ENSMALG00000004093	rab11al	100	90.278	Monopterus_albus
ENSDARG00000014340	rab11al	100	92.593	ENSNBRG00000005116	rab11al	100	92.593	Neolamprologus_brichardi
ENSDARG00000014340	rab11al	100	92.130	ENSONIG00000002281	rab11al	100	92.130	Oreochromis_niloticus
ENSDARG00000014340	rab11al	100	91.204	ENSORLG00000016126	rab11al	100	91.204	Oryzias_latipes
ENSDARG00000014340	rab11al	100	91.204	ENSORLG00020013747	rab11al	100	91.204	Oryzias_latipes_hni
ENSDARG00000014340	rab11al	100	91.204	ENSORLG00015019591	rab11al	100	91.204	Oryzias_latipes_hsok
ENSDARG00000014340	rab11al	100	91.204	ENSOMEG00000020271	rab11al	100	91.204	Oryzias_melastigma
ENSDARG00000014340	rab11al	100	90.278	ENSPKIG00000020893	rab11al	100	90.278	Paramormyrops_kingsleyae
ENSDARG00000014340	rab11al	99	81.860	ENSPSIG00000013143	-	99	81.860	Pelodiscus_sinensis
ENSDARG00000014340	rab11al	100	88.889	ENSPMGG00000004220	rab11al	100	88.889	Periophthalmus_magnuspinnatus
ENSDARG00000014340	rab11al	100	89.815	ENSPFOG00000011316	rab11al	100	89.815	Poecilia_formosa
ENSDARG00000014340	rab11al	100	89.815	ENSPLAG00000007986	rab11al	100	89.815	Poecilia_latipinna
ENSDARG00000014340	rab11al	100	89.815	ENSPMEG00000000804	rab11al	100	89.815	Poecilia_mexicana
ENSDARG00000014340	rab11al	100	89.815	ENSPREG00000017324	rab11al	100	89.815	Poecilia_reticulata
ENSDARG00000014340	rab11al	100	92.593	ENSPNYG00000018244	rab11al	100	92.593	Pundamilia_nyererei
ENSDARG00000014340	rab11al	100	93.981	ENSPNAG00000029085	rab11al	100	93.981	Pygocentrus_nattereri
ENSDARG00000014340	rab11al	100	91.667	ENSSFOG00015008618	rab11al	100	91.667	Scleropages_formosus
ENSDARG00000014340	rab11al	100	90.741	ENSSMAG00000016206	rab11al	100	90.741	Scophthalmus_maximus
ENSDARG00000014340	rab11al	100	91.667	ENSSDUG00000006278	rab11al	100	91.667	Seriola_dumerili
ENSDARG00000014340	rab11al	100	91.667	ENSSLDG00000012116	rab11al	100	91.667	Seriola_lalandi_dorsalis
ENSDARG00000014340	rab11al	98	81.132	ENSSPUG00000002526	-	98	81.132	Sphenodon_punctatus
ENSDARG00000014340	rab11al	100	90.741	ENSSPAG00000012044	rab11al	100	90.741	Stegastes_partitus
ENSDARG00000014340	rab11al	94	84.158	ENSTGUG00000003680	-	99	84.158	Taeniopygia_guttata
ENSDARG00000014340	rab11al	99	90.141	ENSTRUG00000007556	rab11al	92	97.872	Takifugu_rubripes
ENSDARG00000014340	rab11al	100	89.352	ENSXCOG00000004226	rab11al	100	89.352	Xiphophorus_couchianus
ENSDARG00000014340	rab11al	100	89.352	ENSXMAG00000027071	rab11al	100	89.352	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005768	endosome	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006887	exocytosis	21873635.	IBA	Process
GO:0032402	melanosome transport	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0055037	recycling endosome	21873635.	IBA	Component