EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000014498 (Gene tree)
Gene ID: 393220
Gene Symbol: ythdf2
Alias: yth2|zgc:56224
Full Name: YTH N(6)-methyladenosine RNA binding protein 2
Gene Type: protein_coding
Species: Danio_rerio
Status: confidence
Strand: Minus strand
Length: 11582 bases
Position: chr17:27407918-27419499
Accession: ZDB-GENE-040426-948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000107692	YTH	PF04146.15	9.9e-40	1	1
ENSDARP00000150327	YTH	PF04146.15	9.9e-40	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000157369	-	963	-	-	- (aa)	-	-
ENSDART00000186773	-	2394	-	ENSDARP00000150327	612 (aa)	-	A0A2R8QBD4
ENSDART00000127043	-	3021	XM_005158763	ENSDARP00000107692	613 (aa)	XP_005158820	E7F1H9

Gene Model

Click here to download ENSDARG00000014498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000014498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000014498	ythdf2	94	60.804	ENSDARG00000057939	ythdf3	98	61.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000014498	ythdf2	96	74.415	ENSG00000198492	YTHDF2	100	82.090	Homo_sapiens
ENSDARG00000014498	ythdf2	100	84.013	ENSAPOG00000014633	ythdf2	100	84.664	Acanthochromis_polyacanthus
ENSDARG00000014498	ythdf2	95	73.390	ENSAMEG00000011429	YTHDF2	96	74.003	Ailuropoda_melanoleuca
ENSDARG00000014498	ythdf2	96	81.188	ENSACIG00000005932	ythdf2	97	82.125	Amphilophus_citrinellus
ENSDARG00000014498	ythdf2	100	83.725	ENSAOCG00000016152	ythdf2	100	84.194	Amphiprion_ocellaris
ENSDARG00000014498	ythdf2	100	83.881	ENSAPEG00000017652	ythdf2	100	84.351	Amphiprion_percula
ENSDARG00000014498	ythdf2	100	83.203	ENSATEG00000012120	ythdf2	100	83.856	Anabas_testudineus
ENSDARG00000014498	ythdf2	100	71.452	ENSACAG00000010846	YTHDF2	97	74.144	Anolis_carolinensis
ENSDARG00000014498	ythdf2	96	74.415	ENSANAG00000032408	YTHDF2	97	74.701	Aotus_nancymaae
ENSDARG00000014498	ythdf2	100	89.661	ENSAMXG00000029759	ythdf2	100	89.984	Astyanax_mexicanus
ENSDARG00000014498	ythdf2	96	74.080	ENSBTAG00000015771	YTHDF2	97	74.359	Bos_taurus
ENSDARG00000014498	ythdf2	96	74.582	ENSCJAG00000009804	YTHDF2	97	74.872	Callithrix_jacchus
ENSDARG00000014498	ythdf2	96	72.879	ENSCAFG00000011700	YTHDF2	97	73.832	Canis_familiaris
ENSDARG00000014498	ythdf2	88	73.540	ENSCAFG00020023623	YTHDF2	97	73.832	Canis_lupus_dingo
ENSDARG00000014498	ythdf2	96	74.242	ENSCHIG00000022985	YTHDF2	97	74.359	Capra_hircus
ENSDARG00000014498	ythdf2	96	74.582	ENSTSYG00000004178	YTHDF2	97	74.701	Carlito_syrichta
ENSDARG00000014498	ythdf2	75	80.645	ENSCAPG00000014520	YTHDF2	76	80.645	Cavia_aperea
ENSDARG00000014498	ythdf2	95	65.812	ENSCPOG00000019907	YTHDF2	95	70.312	Cavia_porcellus
ENSDARG00000014498	ythdf2	96	74.415	ENSCCAG00000027370	YTHDF2	97	74.701	Cebus_capucinus
ENSDARG00000014498	ythdf2	96	74.415	ENSCATG00000044332	YTHDF2	97	74.701	Cercocebus_atys
ENSDARG00000014498	ythdf2	96	73.737	ENSCLAG00000007438	YTHDF2	97	73.846	Chinchilla_lanigera
ENSDARG00000014498	ythdf2	96	74.415	ENSCSAG00000001018	YTHDF2	97	74.701	Chlorocebus_sabaeus
ENSDARG00000014498	ythdf2	96	73.367	ENSCHOG00000000357	YTHDF2	97	74.701	Choloepus_hoffmanni
ENSDARG00000014498	ythdf2	100	72.142	ENSCPBG00000011221	YTHDF2	97	74.617	Chrysemys_picta_bellii
ENSDARG00000014498	ythdf2	95	74.150	ENSCANG00000016001	YTHDF2	97	74.206	Colobus_angolensis_palliatus
ENSDARG00000014498	ythdf2	96	74.247	ENSCGRG00001016726	Ythdf2	97	74.530	Cricetulus_griseus_chok1gshd
ENSDARG00000014498	ythdf2	93	73.785	ENSCGRG00000013563	Ythdf2	97	73.898	Cricetulus_griseus_crigri
ENSDARG00000014498	ythdf2	100	82.915	ENSCSEG00000002716	ythdf2	100	83.542	Cynoglossus_semilaevis
ENSDARG00000014498	ythdf2	100	84.724	ENSCVAG00000015233	ythdf2	100	84.882	Cyprinodon_variegatus
ENSDARG00000014498	ythdf2	96	74.619	ENSDNOG00000033903	YTHDF2	96	74.701	Dasypus_novemcinctus
ENSDARG00000014498	ythdf2	96	74.247	ENSDORG00000016564	Ythdf2	97	74.530	Dipodomys_ordii
ENSDARG00000014498	ythdf2	95	74.024	ENSETEG00000017614	YTHDF2	97	74.306	Echinops_telfairi
ENSDARG00000014498	ythdf2	94	52.123	ENSEBUG00000002410	ythdf2	94	52.459	Eptatretus_burgeri
ENSDARG00000014498	ythdf2	96	74.242	ENSEASG00005010152	YTHDF2	97	74.359	Equus_asinus_asinus
ENSDARG00000014498	ythdf2	96	74.080	ENSECAG00000023108	YTHDF2	97	74.359	Equus_caballus
ENSDARG00000014498	ythdf2	80	84.874	ENSEEUG00000011398	YTHDF2	82	84.889	Erinaceus_europaeus
ENSDARG00000014498	ythdf2	100	87.660	ENSELUG00000014969	ythdf2	100	87.660	Esox_lucius
ENSDARG00000014498	ythdf2	96	73.993	ENSFCAG00000012446	YTHDF2	97	74.443	Felis_catus
ENSDARG00000014498	ythdf2	100	71.268	ENSFALG00000001381	YTHDF2	97	73.559	Ficedula_albicollis
ENSDARG00000014498	ythdf2	95	73.986	ENSFDAG00000021409	YTHDF2	97	74.306	Fukomys_damarensis
ENSDARG00000014498	ythdf2	100	83.307	ENSFHEG00000000837	ythdf2	100	83.619	Fundulus_heteroclitus
ENSDARG00000014498	ythdf2	96	83.031	ENSGMOG00000018778	ythdf2	98	83.110	Gadus_morhua
ENSDARG00000014498	ythdf2	100	70.833	ENSGALG00000034831	YTHDF2	97	74.658	Gallus_gallus
ENSDARG00000014498	ythdf2	99	83.518	ENSGAFG00000002656	ythdf2	97	88.938	Gambusia_affinis
ENSDARG00000014498	ythdf2	96	82.459	ENSGACG00000009603	ythdf2	98	83.779	Gasterosteus_aculeatus
ENSDARG00000014498	ythdf2	96	73.746	ENSGAGG00000004897	YTHDF2	95	74.576	Gopherus_agassizii
ENSDARG00000014498	ythdf2	96	74.247	ENSGGOG00000024069	YTHDF2	97	74.530	Gorilla_gorilla
ENSDARG00000014498	ythdf2	100	82.839	ENSHBUG00000007355	ythdf2	100	83.881	Haplochromis_burtoni
ENSDARG00000014498	ythdf2	99	72.801	ENSHGLG00000009933	YTHDF2	97	75.043	Heterocephalus_glaber_female
ENSDARG00000014498	ythdf2	74	90.909	ENSHGLG00000006605	-	88	90.909	Heterocephalus_glaber_female
ENSDARG00000014498	ythdf2	74	90.909	ENSHGLG00100016422	-	88	90.909	Heterocephalus_glaber_male
ENSDARG00000014498	ythdf2	95	74.194	ENSHGLG00100015127	YTHDF2	97	74.653	Heterocephalus_glaber_male
ENSDARG00000014498	ythdf2	100	81.319	ENSHCOG00000015814	ythdf2	100	82.889	Hippocampus_comes
ENSDARG00000014498	ythdf2	100	87.745	ENSIPUG00000011114	ythdf2	100	87.418	Ictalurus_punctatus
ENSDARG00000014498	ythdf2	96	74.415	ENSSTOG00000025075	YTHDF2	98	74.204	Ictidomys_tridecemlineatus
ENSDARG00000014498	ythdf2	96	74.247	ENSJJAG00000013745	Ythdf2	97	74.530	Jaculus_jaculus
ENSDARG00000014498	ythdf2	100	82.942	ENSKMAG00000009833	ythdf2	100	84.038	Kryptolebias_marmoratus
ENSDARG00000014498	ythdf2	99	83.968	ENSLBEG00000004069	ythdf2	98	84.603	Labrus_bergylta
ENSDARG00000014498	ythdf2	100	71.820	ENSLACG00000011489	YTHDF2	97	74.276	Latimeria_chalumnae
ENSDARG00000014498	ythdf2	100	86.795	ENSLOCG00000005362	ythdf2	100	86.957	Lepisosteus_oculatus
ENSDARG00000014498	ythdf2	95	73.729	ENSLAFG00000030451	YTHDF2	97	74.003	Loxodonta_africana
ENSDARG00000014498	ythdf2	96	74.415	ENSMFAG00000026128	YTHDF2	97	74.701	Macaca_fascicularis
ENSDARG00000014498	ythdf2	96	74.415	ENSMMUG00000011391	YTHDF2	97	74.701	Macaca_mulatta
ENSDARG00000014498	ythdf2	96	74.415	ENSMNEG00000041161	YTHDF2	97	74.701	Macaca_nemestrina
ENSDARG00000014498	ythdf2	93	73.830	ENSMLEG00000030371	YTHDF2	97	74.350	Mandrillus_leucophaeus
ENSDARG00000014498	ythdf2	100	83.568	ENSMAMG00000006782	ythdf2	100	84.664	Mastacembelus_armatus
ENSDARG00000014498	ythdf2	100	82.839	ENSMZEG00005004307	ythdf2	100	83.881	Maylandia_zebra
ENSDARG00000014498	ythdf2	70	93.548	ENSMGAG00000001610	YTHDF2	92	93.878	Meleagris_gallopavo
ENSDARG00000014498	ythdf2	91	72.615	ENSMAUG00000002009	Ythdf2	95	70.690	Mesocricetus_auratus
ENSDARG00000014498	ythdf2	96	74.415	ENSMICG00000003729	YTHDF2	97	74.701	Microcebus_murinus
ENSDARG00000014498	ythdf2	95	74.199	ENSMOCG00000018361	Ythdf2	99	74.359	Microtus_ochrogaster
ENSDARG00000014498	ythdf2	82	96.335	ENSMMOG00000010124	ythdf2	97	96.703	Mola_mola
ENSDARG00000014498	ythdf2	100	71.111	ENSMODG00000010973	YTHDF2	97	75.000	Monodelphis_domestica
ENSDARG00000014498	ythdf2	96	82.815	ENSMALG00000013692	ythdf2	98	83.887	Monopterus_albus
ENSDARG00000014498	ythdf2	96	74.415	ENSMUSG00000040025	Ythdf2	97	74.701	Mus_musculus
ENSDARG00000014498	ythdf2	91	71.858	MGP_PahariEiJ_G0028892	Ythdf2	99	72.743	Mus_pahari
ENSDARG00000014498	ythdf2	96	74.080	ENSMPUG00000015501	YTHDF2	97	74.359	Mustela_putorius_furo
ENSDARG00000014498	ythdf2	95	73.862	ENSMLUG00000012606	YTHDF2	97	74.359	Myotis_lucifugus
ENSDARG00000014498	ythdf2	96	73.913	ENSNGAG00000014432	Ythdf2	97	74.359	Nannospalax_galili
ENSDARG00000014498	ythdf2	100	82.969	ENSNBRG00000024009	ythdf2	100	84.013	Neolamprologus_brichardi
ENSDARG00000014498	ythdf2	96	74.415	ENSNLEG00000009856	YTHDF2	97	74.701	Nomascus_leucogenys
ENSDARG00000014498	ythdf2	51	69.817	ENSMEUG00000016488	-	95	72.549	Notamacropus_eugenii
ENSDARG00000014498	ythdf2	80	70.925	ENSOPRG00000017111	YTHDF2	78	70.629	Ochotona_princeps
ENSDARG00000014498	ythdf2	77	69.583	ENSODEG00000002437	-	87	70.862	Octodon_degus
ENSDARG00000014498	ythdf2	86	62.900	ENSODEG00000017508	-	97	64.030	Octodon_degus
ENSDARG00000014498	ythdf2	96	80.592	ENSONIG00000003485	ythdf2	95	81.803	Oreochromis_niloticus
ENSDARG00000014498	ythdf2	67	90.955	ENSOANG00000006124	YTHDF2	94	85.922	Ornithorhynchus_anatinus
ENSDARG00000014498	ythdf2	96	74.247	ENSOCUG00000010612	YTHDF2	97	74.530	Oryctolagus_cuniculus
ENSDARG00000014498	ythdf2	100	81.162	ENSORLG00000014323	ythdf2	100	82.732	Oryzias_latipes
ENSDARG00000014498	ythdf2	100	80.818	ENSORLG00020013978	ythdf2	100	82.547	Oryzias_latipes_hni
ENSDARG00000014498	ythdf2	100	80.691	ENSORLG00015012539	ythdf2	100	82.418	Oryzias_latipes_hsok
ENSDARG00000014498	ythdf2	100	82.003	ENSOMEG00000011398	ythdf2	100	82.942	Oryzias_melastigma
ENSDARG00000014498	ythdf2	96	74.080	ENSOGAG00000014648	YTHDF2	97	74.359	Otolemur_garnettii
ENSDARG00000014498	ythdf2	95	72.496	ENSOARG00000002698	YTHDF2	97	73.832	Ovis_aries
ENSDARG00000014498	ythdf2	96	74.415	ENSPPAG00000032722	YTHDF2	97	74.701	Pan_paniscus
ENSDARG00000014498	ythdf2	96	74.161	ENSPPRG00000005205	YTHDF2	97	74.443	Panthera_pardus
ENSDARG00000014498	ythdf2	89	73.599	ENSPTIG00000013201	YTHDF2	97	73.921	Panthera_tigris_altaica
ENSDARG00000014498	ythdf2	96	74.415	ENSPTRG00000000439	YTHDF2	97	74.701	Pan_troglodytes
ENSDARG00000014498	ythdf2	61	84.874	ENSPANG00000006550	YTHDF2	92	84.559	Papio_anubis
ENSDARG00000014498	ythdf2	100	89.070	ENSPKIG00000008986	ythdf2	100	89.070	Paramormyrops_kingsleyae
ENSDARG00000014498	ythdf2	94	71.501	ENSPSIG00000016583	YTHDF2	96	72.279	Pelodiscus_sinensis
ENSDARG00000014498	ythdf2	100	82.390	ENSPMGG00000004077	ythdf2	99	82.492	Periophthalmus_magnuspinnatus
ENSDARG00000014498	ythdf2	96	73.913	ENSPEMG00000014903	Ythdf2	98	73.592	Peromyscus_maniculatus_bairdii
ENSDARG00000014498	ythdf2	95	57.516	ENSPMAG00000007948	ythdf2	97	59.008	Petromyzon_marinus
ENSDARG00000014498	ythdf2	100	70.635	ENSPCIG00000022413	YTHDF2	97	74.232	Phascolarctos_cinereus
ENSDARG00000014498	ythdf2	100	83.386	ENSPFOG00000004455	ythdf2	100	84.796	Poecilia_formosa
ENSDARG00000014498	ythdf2	100	83.542	ENSPLAG00000009752	ythdf2	100	84.953	Poecilia_latipinna
ENSDARG00000014498	ythdf2	100	83.386	ENSPMEG00000014660	ythdf2	100	84.796	Poecilia_mexicana
ENSDARG00000014498	ythdf2	100	83.255	ENSPREG00000019412	ythdf2	100	84.507	Poecilia_reticulata
ENSDARG00000014498	ythdf2	83	69.515	ENSPPYG00000001634	YTHDF2	100	70.097	Pongo_abelii
ENSDARG00000014498	ythdf2	100	71.429	ENSPCAG00000007587	YTHDF2	97	74.359	Procavia_capensis
ENSDARG00000014498	ythdf2	95	73.038	ENSPCOG00000010131	YTHDF2	95	73.438	Propithecus_coquereli
ENSDARG00000014498	ythdf2	96	73.913	ENSPVAG00000017224	YTHDF2	97	74.188	Pteropus_vampyrus
ENSDARG00000014498	ythdf2	100	82.812	ENSPNYG00000018403	ythdf2	100	83.699	Pundamilia_nyererei
ENSDARG00000014498	ythdf2	100	88.710	ENSPNAG00000001061	ythdf2	100	88.871	Pygocentrus_nattereri
ENSDARG00000014498	ythdf2	91	73.415	ENSRNOG00000010892	Ythdf2	94	73.768	Rattus_norvegicus
ENSDARG00000014498	ythdf2	96	74.415	ENSRBIG00000043898	YTHDF2	97	74.701	Rhinopithecus_bieti
ENSDARG00000014498	ythdf2	96	74.415	ENSRROG00000038863	YTHDF2	97	74.701	Rhinopithecus_roxellana
ENSDARG00000014498	ythdf2	96	74.415	ENSSBOG00000034045	YTHDF2	97	74.701	Saimiri_boliviensis_boliviensis
ENSDARG00000014498	ythdf2	94	72.589	ENSSHAG00000009502	YTHDF2	97	74.719	Sarcophilus_harrisii
ENSDARG00000014498	ythdf2	100	88.091	ENSSFOG00015001525	ythdf2	100	88.091	Scleropages_formosus
ENSDARG00000014498	ythdf2	100	82.759	ENSSMAG00000019678	ythdf2	100	83.856	Scophthalmus_maximus
ENSDARG00000014498	ythdf2	100	83.568	ENSSDUG00000016335	ythdf2	100	84.507	Seriola_dumerili
ENSDARG00000014498	ythdf2	100	83.542	ENSSLDG00000019751	ythdf2	100	84.483	Seriola_lalandi_dorsalis
ENSDARG00000014498	ythdf2	96	72.241	ENSSARG00000001187	YTHDF2	97	72.479	Sorex_araneus
ENSDARG00000014498	ythdf2	100	71.452	ENSSPUG00000010274	YTHDF2	97	74.320	Sphenodon_punctatus
ENSDARG00000014498	ythdf2	100	83.699	ENSSPAG00000017103	ythdf2	100	84.639	Stegastes_partitus
ENSDARG00000014498	ythdf2	96	74.000	ENSSSCG00000027686	YTHDF2	97	74.530	Sus_scrofa
ENSDARG00000014498	ythdf2	89	71.920	ENSTGUG00000017347	YTHDF2	98	73.752	Taeniopygia_guttata
ENSDARG00000014498	ythdf2	100	82.759	ENSTRUG00000011923	ythdf2	100	82.889	Takifugu_rubripes
ENSDARG00000014498	ythdf2	96	78.140	ENSTNIG00000017263	ythdf2	97	78.738	Tetraodon_nigroviridis
ENSDARG00000014498	ythdf2	89	65.954	ENSTBEG00000009072	YTHDF2	97	67.222	Tupaia_belangeri
ENSDARG00000014498	ythdf2	95	74.368	ENSTTRG00000013603	YTHDF2	99	74.359	Tursiops_truncatus
ENSDARG00000014498	ythdf2	96	74.080	ENSUAMG00000008774	YTHDF2	97	74.359	Ursus_americanus
ENSDARG00000014498	ythdf2	88	73.540	ENSUMAG00000011040	YTHDF2	97	73.832	Ursus_maritimus
ENSDARG00000014498	ythdf2	73	63.457	ENSVPAG00000006783	YTHDF2	76	64.551	Vicugna_pacos
ENSDARG00000014498	ythdf2	96	74.080	ENSVVUG00000012648	YTHDF2	97	74.359	Vulpes_vulpes
ENSDARG00000014498	ythdf2	95	62.222	ENSXETG00000020636	ythdf2	96	59.652	Xenopus_tropicalis
ENSDARG00000014498	ythdf2	95	81.063	ENSXCOG00000004960	ythdf2	97	82.997	Xiphophorus_couchianus
ENSDARG00000014498	ythdf2	100	83.386	ENSXMAG00000018758	ythdf2	100	84.796	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000932	P-body	-	IEA	Component
GO:0001556	oocyte maturation	-	ISS	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0006401	RNA catabolic process	28192787.	IMP	Process
GO:0006402	mRNA catabolic process	28192787.	IMP	Process
GO:0045746	negative regulation of Notch signaling pathway	28869969.	IMP	Process
GO:0048598	embryonic morphogenesis	28192787.	IMP	Process
GO:0061157	mRNA destabilization	28192787.	IDA	Process
GO:0071425	hematopoietic stem cell proliferation	28869969.	IMP	Process
GO:0098508	endothelial to hematopoietic transition	28869969.	IMP	Process
GO:1902036	regulation of hematopoietic stem cell differentiation	28869969.	IMP	Process
GO:1903538	regulation of meiotic cell cycle process involved in oocyte maturation	-	ISS	Process
GO:1990247	N6-methyladenosine-containing RNA binding	28192787.28869969.	IDA	Function