EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000014565 (Gene tree)
Gene ID: 30738
Gene Symbol: eif4e1b
Alias: eif4e|zeIF4E
Full Name: eukaryotic translation initiation factor 4E family member 1B
Gene Type: protein_coding
Species: Danio_rerio
Status: confidence
Strand: Minus strand
Length: 13831 bases
Position: chr5:67785991-67799821
Accession: ZDB-GENE-980526-127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000146207	IF4E	PF01652.18	1.4e-52	1	1
ENSDARP00000022906	IF4E	PF01652.18	2.3e-52	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	preZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000192117	-	948	-	ENSDARP00000146207	183 (aa)	-	Q9PW29
ENSDART00000017881	-	3086	-	ENSDARP00000022906	214 (aa)	-	Q9PW28

Gene Model

Click here to download ENSDARG00000014565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000014565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000014565	eif4e1b	84	30.000	ENSDARG00000005078	eif4e3	68	30.000
ENSDARG00000014565	eif4e1b	100	72.678	ENSDARG00000077012	eif4ea	87	72.043
ENSDARG00000014565	eif4e1b	100	73.770	ENSDARG00000013274	eif4eb	88	71.958
ENSDARG00000014565	eif4e1b	92	31.792	ENSDARG00000038585	eif4e2	85	34.426
ENSDARG00000014565	eif4e1b	100	65.574	ENSDARG00000012274	eif4e1c	100	59.829
ENSDARG00000014565	eif4e1b	99	31.016	ENSDARG00000015835	eif4e2rs1	80	31.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000014565	eif4e1b	99	72.376	ENSG00000175766	EIF4E1B	75	72.376	Homo_sapiens
ENSDARG00000014565	eif4e1b	96	67.598	ENSAMEG00000007196	EIF4E1B	71	67.598	Ailuropoda_melanoleuca
ENSDARG00000014565	eif4e1b	57	78.095	ENSAPLG00000002322	EIF4E1B	100	78.095	Anas_platyrhynchos
ENSDARG00000014565	eif4e1b	99	79.121	ENSACAG00000007055	EIF4E1B	99	77.957	Anolis_carolinensis
ENSDARG00000014565	eif4e1b	99	74.586	ENSANAG00000024720	EIF4E1B	76	74.586	Aotus_nancymaae
ENSDARG00000014565	eif4e1b	99	71.429	ENSAMXG00000043293	eif4e1b	100	69.767	Astyanax_mexicanus
ENSDARG00000014565	eif4e1b	99	70.718	ENSBTAG00000003103	EIF4E1B	78	70.718	Bos_taurus
ENSDARG00000014565	eif4e1b	99	74.586	ENSCJAG00000007291	EIF4E1B	76	74.586	Callithrix_jacchus
ENSDARG00000014565	eif4e1b	99	75.138	ENSCAFG00000016643	EIF4E1B	77	75.138	Canis_familiaris
ENSDARG00000014565	eif4e1b	99	74.033	ENSCAFG00020011562	EIF4E1B	85	72.973	Canis_lupus_dingo
ENSDARG00000014565	eif4e1b	96	72.571	ENSCHIG00000006321	EIF4E1B	95	68.984	Capra_hircus
ENSDARG00000014565	eif4e1b	99	65.746	ENSTSYG00000025856	EIF4E1B	79	65.746	Carlito_syrichta
ENSDARG00000014565	eif4e1b	93	64.912	ENSCAPG00000011182	EIF4E1B	76	64.912	Cavia_aperea
ENSDARG00000014565	eif4e1b	99	72.376	ENSCPOG00000004429	EIF4E1B	74	72.376	Cavia_porcellus
ENSDARG00000014565	eif4e1b	99	74.586	ENSCCAG00000008488	EIF4E1B	76	74.586	Cebus_capucinus
ENSDARG00000014565	eif4e1b	99	72.928	ENSCATG00000036544	EIF4E1B	74	72.928	Cercocebus_atys
ENSDARG00000014565	eif4e1b	99	71.823	ENSCLAG00000013384	EIF4E1B	92	73.958	Chinchilla_lanigera
ENSDARG00000014565	eif4e1b	99	72.376	ENSCSAG00000009203	EIF4E1B	73	72.376	Chlorocebus_sabaeus
ENSDARG00000014565	eif4e1b	72	80.303	ENSCPBG00000022627	EIF4E1B	100	80.303	Chrysemys_picta_bellii
ENSDARG00000014565	eif4e1b	97	61.236	ENSCING00000004199	-	80	61.326	Ciona_intestinalis
ENSDARG00000014565	eif4e1b	99	72.376	ENSCANG00000031424	EIF4E1B	74	72.376	Colobus_angolensis_palliatus
ENSDARG00000014565	eif4e1b	99	68.132	ENSCGRG00001003887	Eif4e1b	96	67.133	Cricetulus_griseus_chok1gshd
ENSDARG00000014565	eif4e1b	62	59.649	ENSCGRG00000017018	-	100	59.649	Cricetulus_griseus_crigri
ENSDARG00000014565	eif4e1b	99	72.376	ENSDNOG00000032189	EIF4E1B	68	72.376	Dasypus_novemcinctus
ENSDARG00000014565	eif4e1b	99	67.403	ENSDORG00000016043	Eif4e1b	87	67.010	Dipodomys_ordii
ENSDARG00000014565	eif4e1b	96	60.227	ENSEBUG00000014777	eif4e1b	86	60.795	Eptatretus_burgeri
ENSDARG00000014565	eif4e1b	99	71.823	ENSEASG00005012081	EIF4E1B	74	71.823	Equus_asinus_asinus
ENSDARG00000014565	eif4e1b	99	71.823	ENSECAG00000022357	EIF4E1B	66	71.823	Equus_caballus
ENSDARG00000014565	eif4e1b	99	67.403	ENSEEUG00000005920	EIF4E1B	97	65.957	Erinaceus_europaeus
ENSDARG00000014565	eif4e1b	99	87.293	ENSELUG00000021695	eif4e1b	79	85.484	Esox_lucius
ENSDARG00000014565	eif4e1b	99	74.033	ENSFCAG00000003074	EIF4E1B	73	74.033	Felis_catus
ENSDARG00000014565	eif4e1b	99	76.923	ENSFALG00000008607	EIF4E1B	83	76.923	Ficedula_albicollis
ENSDARG00000014565	eif4e1b	99	71.271	ENSFDAG00000008704	EIF4E1B	73	71.271	Fukomys_damarensis
ENSDARG00000014565	eif4e1b	98	78.212	ENSGALG00000026037	EIF4E1B	71	78.212	Gallus_gallus
ENSDARG00000014565	eif4e1b	78	78.322	ENSGAGG00000012675	EIF4E1B	96	78.322	Gopherus_agassizii
ENSDARG00000014565	eif4e1b	99	73.481	ENSGGOG00000015854	EIF4E1B	75	73.481	Gorilla_gorilla
ENSDARG00000014565	eif4e1b	99	72.376	ENSHGLG00000016879	-	82	73.267	Heterocephalus_glaber_female
ENSDARG00000014565	eif4e1b	99	68.235	ENSHGLG00100012839	-	79	68.235	Heterocephalus_glaber_male
ENSDARG00000014565	eif4e1b	99	88.462	ENSIPUG00000020654	eif4e1b	100	83.333	Ictalurus_punctatus
ENSDARG00000014565	eif4e1b	99	68.508	ENSSTOG00000002002	EIF4E1B	75	68.508	Ictidomys_tridecemlineatus
ENSDARG00000014565	eif4e1b	99	72.376	ENSJJAG00000017541	Eif4e1b	74	72.376	Jaculus_jaculus
ENSDARG00000014565	eif4e1b	100	83.060	ENSLOCG00000011832	eif4e1b	82	83.060	Lepisosteus_oculatus
ENSDARG00000014565	eif4e1b	84	63.636	ENSLAFG00000027919	EIF4E1B	85	63.636	Loxodonta_africana
ENSDARG00000014565	eif4e1b	99	72.928	ENSMFAG00000031726	EIF4E1B	85	72.928	Macaca_fascicularis
ENSDARG00000014565	eif4e1b	99	72.928	ENSMMUG00000000142	EIF4E1B	74	72.928	Macaca_mulatta
ENSDARG00000014565	eif4e1b	99	72.928	ENSMNEG00000031510	EIF4E1B	74	72.928	Macaca_nemestrina
ENSDARG00000014565	eif4e1b	99	72.928	ENSMLEG00000037281	EIF4E1B	74	72.928	Mandrillus_leucophaeus
ENSDARG00000014565	eif4e1b	99	79.670	ENSMGAG00000004602	EIF4E1B	87	77.660	Meleagris_gallopavo
ENSDARG00000014565	eif4e1b	62	61.404	ENSMAUG00000000789	-	100	61.404	Mesocricetus_auratus
ENSDARG00000014565	eif4e1b	99	63.536	ENSMICG00000047427	EIF4E1B	73	63.536	Microcebus_murinus
ENSDARG00000014565	eif4e1b	62	62.281	ENSMOCG00000020755	-	100	62.281	Microtus_ochrogaster
ENSDARG00000014565	eif4e1b	66	68.595	ENSMODG00000016941	-	95	68.595	Monodelphis_domestica
ENSDARG00000014565	eif4e1b	99	70.330	ENSMODG00000005097	-	87	69.149	Monodelphis_domestica
ENSDARG00000014565	eif4e1b	99	65.193	MGP_CAROLIEiJ_G0018546	Eif4e1b	100	56.410	Mus_caroli
ENSDARG00000014565	eif4e1b	99	65.746	ENSMUSG00000074895	Eif4e1b	98	56.757	Mus_musculus
ENSDARG00000014565	eif4e1b	99	67.956	MGP_PahariEiJ_G0019611	Eif4e1b	100	60.194	Mus_pahari
ENSDARG00000014565	eif4e1b	99	65.746	MGP_SPRETEiJ_G0019426	Eif4e1b	98	56.757	Mus_spretus
ENSDARG00000014565	eif4e1b	99	74.033	ENSMPUG00000012507	EIF4E1B	69	74.033	Mustela_putorius_furo
ENSDARG00000014565	eif4e1b	99	72.376	ENSMLUG00000001437	EIF4E1B	73	72.376	Myotis_lucifugus
ENSDARG00000014565	eif4e1b	62	61.404	ENSNGAG00000012821	-	100	61.404	Nannospalax_galili
ENSDARG00000014565	eif4e1b	99	73.481	ENSNLEG00000012532	EIF4E1B	75	73.481	Nomascus_leucogenys
ENSDARG00000014565	eif4e1b	97	61.017	ENSMEUG00000002671	EIF4E1B	96	61.017	Notamacropus_eugenii
ENSDARG00000014565	eif4e1b	77	68.085	ENSOPRG00000008875	EIF4E1B	94	68.085	Ochotona_princeps
ENSDARG00000014565	eif4e1b	99	69.061	ENSODEG00000009390	EIF4E1B	75	69.061	Octodon_degus
ENSDARG00000014565	eif4e1b	99	72.376	ENSOCUG00000007864	EIF4E1B	82	72.376	Oryctolagus_cuniculus
ENSDARG00000014565	eif4e1b	99	73.481	ENSOGAG00000005844	EIF4E1B	87	73.481	Otolemur_garnettii
ENSDARG00000014565	eif4e1b	99	72.131	ENSOARG00000002979	EIF4E1B	79	72.131	Ovis_aries
ENSDARG00000014565	eif4e1b	99	73.481	ENSPPAG00000036530	EIF4E1B	73	73.481	Pan_paniscus
ENSDARG00000014565	eif4e1b	99	74.033	ENSPPRG00000011119	EIF4E1B	73	74.033	Panthera_pardus
ENSDARG00000014565	eif4e1b	99	74.033	ENSPTIG00000012304	EIF4E1B	74	74.033	Panthera_tigris_altaica
ENSDARG00000014565	eif4e1b	99	73.481	ENSPTRG00000028481	EIF4E1B	75	73.481	Pan_troglodytes
ENSDARG00000014565	eif4e1b	99	72.376	ENSPANG00000014775	EIF4E1B	74	72.376	Papio_anubis
ENSDARG00000014565	eif4e1b	100	78.689	ENSPKIG00000025064	eif4e1b	86	78.689	Paramormyrops_kingsleyae
ENSDARG00000014565	eif4e1b	62	61.404	ENSPEMG00000006338	-	100	61.404	Peromyscus_maniculatus_bairdii
ENSDARG00000014565	eif4e1b	99	69.780	ENSPCIG00000018442	EIF4E1B	74	68.617	Phascolarctos_cinereus
ENSDARG00000014565	eif4e1b	100	70.492	ENSPPYG00000016077	-	85	70.270	Pongo_abelii
ENSDARG00000014565	eif4e1b	67	69.106	ENSPCAG00000003618	-	100	69.106	Procavia_capensis
ENSDARG00000014565	eif4e1b	99	70.718	ENSPCOG00000019904	EIF4E1B	77	70.718	Propithecus_coquereli
ENSDARG00000014565	eif4e1b	96	71.023	ENSPVAG00000017039	EIF4E1B	84	70.000	Pteropus_vampyrus
ENSDARG00000014565	eif4e1b	99	87.363	ENSPNAG00000000195	eif4e1b	100	81.860	Pygocentrus_nattereri
ENSDARG00000014565	eif4e1b	99	71.271	ENSRBIG00000039242	EIF4E1B	85	71.271	Rhinopithecus_bieti
ENSDARG00000014565	eif4e1b	99	71.271	ENSRROG00000042084	EIF4E1B	74	71.271	Rhinopithecus_roxellana
ENSDARG00000014565	eif4e1b	99	74.033	ENSSBOG00000030710	EIF4E1B	76	74.033	Saimiri_boliviensis_boliviensis
ENSDARG00000014565	eif4e1b	99	69.780	ENSSHAG00000007864	EIF4E1B	91	69.780	Sarcophilus_harrisii
ENSDARG00000014565	eif4e1b	100	82.514	ENSSFOG00015005488	eif4e1b	84	82.514	Scleropages_formosus
ENSDARG00000014565	eif4e1b	54	70.408	ENSSARG00000010425	-	83	70.408	Sorex_araneus
ENSDARG00000014565	eif4e1b	99	79.670	ENSSPUG00000006304	EIF4E1B	99	78.409	Sphenodon_punctatus
ENSDARG00000014565	eif4e1b	99	74.586	ENSSSCG00000014052	EIF4E1B	74	74.586	Sus_scrofa
ENSDARG00000014565	eif4e1b	91	77.246	ENSTGUG00000000504	EIF4E1B	100	77.246	Taeniopygia_guttata
ENSDARG00000014565	eif4e1b	78	68.310	ENSTBEG00000001631	EIF4E1B	80	68.310	Tupaia_belangeri
ENSDARG00000014565	eif4e1b	98	71.667	ENSTTRG00000014026	EIF4E1B	85	71.667	Tursiops_truncatus
ENSDARG00000014565	eif4e1b	99	74.033	ENSUAMG00000022136	EIF4E1B	98	69.231	Ursus_americanus
ENSDARG00000014565	eif4e1b	96	75.000	ENSVVUG00000001475	EIF4E1B	77	71.892	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000340	RNA 7-methylguanosine cap binding	21873635.	IBA	Function
GO:0000340	RNA 7-methylguanosine cap binding	14701818.	IDA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	IEA	Function
GO:0003743	translation initiation factor activity	-	ISS	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005845	mRNA cap binding complex	-	ISS	Component
GO:0006412	translation	-	IEA	Process
GO:0006413	translational initiation	-	IEA	Process
GO:0016281	eukaryotic translation initiation factor 4F complex	21873635.	IBA	Component
GO:0016281	eukaryotic translation initiation factor 4F complex	-	ISS	Component