EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000015394 (Gene tree)
Gene ID: 445035
Gene Symbol: thoc7
Alias: im:7153996|wu:fa20e08|wu:fj35e07|zgc:92711
Full Name: THO complex 7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8106 bases
Position: chr11:19603251-19611356
Accession: ZDB-GENE-040801-17
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000022217	THOC7	PF05615.13	2.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000005639	-	777	-	ENSDARP00000022217	202 (aa)	-	Q6DGZ3

Gene Model

Click here to download ENSDARG00000015394's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000015394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000015394	thoc7	99	77.114	ENSG00000163634	THOC7	97	89.655	Homo_sapiens
ENSDARG00000015394	thoc7	100	81.683	ENSAPOG00000009523	thoc7	100	81.683	Acanthochromis_polyacanthus
ENSDARG00000015394	thoc7	98	75.758	ENSAMEG00000015287	THOC7	97	75.758	Ailuropoda_melanoleuca
ENSDARG00000015394	thoc7	99	79.104	ENSACIG00000008742	thoc7	98	79.104	Amphilophus_citrinellus
ENSDARG00000015394	thoc7	100	82.178	ENSAOCG00000006925	thoc7	100	82.178	Amphiprion_ocellaris
ENSDARG00000015394	thoc7	97	82.653	ENSAPEG00000001653	thoc7	93	83.784	Amphiprion_percula
ENSDARG00000015394	thoc7	100	81.281	ENSATEG00000018422	thoc7	100	81.281	Anabas_testudineus
ENSDARG00000015394	thoc7	96	78.571	ENSAPLG00000003317	THOC7	96	78.571	Anas_platyrhynchos
ENSDARG00000015394	thoc7	100	77.340	ENSACAG00000001152	THOC7	99	77.340	Anolis_carolinensis
ENSDARG00000015394	thoc7	98	77.778	ENSANAG00000030433	THOC7	97	77.949	Aotus_nancymaae
ENSDARG00000015394	thoc7	100	82.266	ENSACLG00000015413	thoc7	100	82.266	Astatotilapia_calliptera
ENSDARG00000015394	thoc7	100	85.222	ENSAMXG00000014367	thoc7	100	85.222	Astyanax_mexicanus
ENSDARG00000015394	thoc7	99	77.114	ENSBTAG00000032872	THOC7	98	77.114	Bos_taurus
ENSDARG00000015394	thoc7	99	75.124	ENSCJAG00000022907	-	98	75.124	Callithrix_jacchus
ENSDARG00000015394	thoc7	99	77.612	ENSCJAG00000034899	-	98	77.612	Callithrix_jacchus
ENSDARG00000015394	thoc7	96	75.773	ENSCAFG00000006867	THOC7	98	75.773	Canis_familiaris
ENSDARG00000015394	thoc7	99	75.622	ENSCAFG00020010785	THOC7	98	75.622	Canis_lupus_dingo
ENSDARG00000015394	thoc7	99	76.617	ENSCHIG00000018603	THOC7	98	76.617	Capra_hircus
ENSDARG00000015394	thoc7	99	76.617	ENSTSYG00000013055	THOC7	98	76.617	Carlito_syrichta
ENSDARG00000015394	thoc7	99	67.980	ENSCAPG00000009089	THOC7	98	67.980	Cavia_aperea
ENSDARG00000015394	thoc7	99	77.114	ENSCPOG00000007930	THOC7	98	77.114	Cavia_porcellus
ENSDARG00000015394	thoc7	99	77.612	ENSCCAG00000001638	THOC7	98	77.612	Cebus_capucinus
ENSDARG00000015394	thoc7	99	77.612	ENSCATG00000038732	THOC7	98	77.612	Cercocebus_atys
ENSDARG00000015394	thoc7	98	75.500	ENSCLAG00000000664	THOC7	97	76.684	Chinchilla_lanigera
ENSDARG00000015394	thoc7	99	77.612	ENSCSAG00000011986	THOC7	98	77.612	Chlorocebus_sabaeus
ENSDARG00000015394	thoc7	75	64.052	ENSCHOG00000012170	THOC7	97	64.052	Choloepus_hoffmanni
ENSDARG00000015394	thoc7	72	78.912	ENSCPBG00000026834	THOC7	97	78.912	Chrysemys_picta_bellii
ENSDARG00000015394	thoc7	88	51.124	ENSCING00000015312	-	88	50.267	Ciona_intestinalis
ENSDARG00000015394	thoc7	95	52.332	ENSCSAVG00000010669	-	96	51.795	Ciona_savignyi
ENSDARG00000015394	thoc7	98	76.263	ENSCANG00000028301	THOC7	98	77.320	Colobus_angolensis_palliatus
ENSDARG00000015394	thoc7	99	78.000	ENSCGRG00001014815	Thoc7	98	78.000	Cricetulus_griseus_chok1gshd
ENSDARG00000015394	thoc7	96	78.351	ENSCGRG00000014860	Thoc7	97	78.351	Cricetulus_griseus_crigri
ENSDARG00000015394	thoc7	100	76.733	ENSCSEG00000005643	thoc7	100	76.733	Cynoglossus_semilaevis
ENSDARG00000015394	thoc7	100	82.759	ENSCVAG00000008059	thoc7	100	82.759	Cyprinodon_variegatus
ENSDARG00000015394	thoc7	99	77.114	ENSDNOG00000005917	-	98	77.114	Dasypus_novemcinctus
ENSDARG00000015394	thoc7	84	51.765	ENSDNOG00000047257	-	89	48.958	Dasypus_novemcinctus
ENSDARG00000015394	thoc7	88	77.528	ENSDORG00000009225	-	93	77.528	Dipodomys_ordii
ENSDARG00000015394	thoc7	98	72.081	ENSDORG00000028787	-	93	79.006	Dipodomys_ordii
ENSDARG00000015394	thoc7	90	41.209	FBgn0035110	thoc7	63	41.209	Drosophila_melanogaster
ENSDARG00000015394	thoc7	96	68.041	ENSETEG00000015076	THOC7	98	68.041	Echinops_telfairi
ENSDARG00000015394	thoc7	99	62.000	ENSEBUG00000006746	thoc7	96	62.000	Eptatretus_burgeri
ENSDARG00000015394	thoc7	99	74.000	ENSEASG00005001507	THOC7	96	77.720	Equus_asinus_asinus
ENSDARG00000015394	thoc7	99	77.500	ENSECAG00000000497	THOC7	98	77.500	Equus_caballus
ENSDARG00000015394	thoc7	91	79.235	ENSEEUG00000015161	THOC7	96	79.235	Erinaceus_europaeus
ENSDARG00000015394	thoc7	100	86.634	ENSELUG00000007905	thoc7	100	86.634	Esox_lucius
ENSDARG00000015394	thoc7	99	76.617	ENSFCAG00000023008	THOC7	98	76.617	Felis_catus
ENSDARG00000015394	thoc7	98	77.778	ENSFALG00000013245	THOC7	98	77.778	Ficedula_albicollis
ENSDARG00000015394	thoc7	95	77.202	ENSFDAG00000016387	THOC7	97	77.202	Fukomys_damarensis
ENSDARG00000015394	thoc7	100	83.251	ENSFHEG00000004406	thoc7	100	83.251	Fundulus_heteroclitus
ENSDARG00000015394	thoc7	96	80.412	ENSGMOG00000009111	thoc7	100	80.412	Gadus_morhua
ENSDARG00000015394	thoc7	99	79.000	ENSGALG00000007299	THOC7	98	79.000	Gallus_gallus
ENSDARG00000015394	thoc7	99	81.281	ENSGACG00000009218	thoc7	98	81.281	Gasterosteus_aculeatus
ENSDARG00000015394	thoc7	99	79.500	ENSGAGG00000008038	THOC7	98	79.500	Gopherus_agassizii
ENSDARG00000015394	thoc7	96	77.436	ENSGGOG00000024282	THOC7	98	77.320	Gorilla_gorilla
ENSDARG00000015394	thoc7	100	82.759	ENSHBUG00000004070	thoc7	100	82.759	Haplochromis_burtoni
ENSDARG00000015394	thoc7	98	58.376	ENSHGLG00000003232	-	97	58.376	Heterocephalus_glaber_female
ENSDARG00000015394	thoc7	99	77.000	ENSHGLG00000002165	THOC7	98	77.000	Heterocephalus_glaber_female
ENSDARG00000015394	thoc7	96	62.371	ENSHGLG00000015921	-	93	62.371	Heterocephalus_glaber_female
ENSDARG00000015394	thoc7	98	58.376	ENSHGLG00100018265	-	97	58.376	Heterocephalus_glaber_male
ENSDARG00000015394	thoc7	95	77.202	ENSHGLG00100007183	-	97	77.202	Heterocephalus_glaber_male
ENSDARG00000015394	thoc7	96	62.371	ENSHGLG00100017070	-	93	62.371	Heterocephalus_glaber_male
ENSDARG00000015394	thoc7	98	78.788	ENSHCOG00000013910	thoc7	98	78.788	Hippocampus_comes
ENSDARG00000015394	thoc7	71	78.621	ENSHCOG00000014078	thoc7	97	78.621	Hippocampus_comes
ENSDARG00000015394	thoc7	100	85.222	ENSIPUG00000023494	thoc7	100	85.222	Ictalurus_punctatus
ENSDARG00000015394	thoc7	96	77.835	ENSSTOG00000012552	THOC7	97	77.835	Ictidomys_tridecemlineatus
ENSDARG00000015394	thoc7	92	63.441	ENSJJAG00000018503	-	89	63.441	Jaculus_jaculus
ENSDARG00000015394	thoc7	90	80.110	ENSJJAG00000016662	-	91	80.110	Jaculus_jaculus
ENSDARG00000015394	thoc7	100	81.773	ENSKMAG00000009670	thoc7	100	81.773	Kryptolebias_marmoratus
ENSDARG00000015394	thoc7	99	80.597	ENSLBEG00000025612	thoc7	99	80.597	Labrus_bergylta
ENSDARG00000015394	thoc7	93	79.255	ENSLACG00000003527	THOC7	92	79.255	Latimeria_chalumnae
ENSDARG00000015394	thoc7	99	78.431	ENSLOCG00000010342	thoc7	99	78.431	Lepisosteus_oculatus
ENSDARG00000015394	thoc7	98	75.758	ENSLAFG00000001987	THOC7	97	75.758	Loxodonta_africana
ENSDARG00000015394	thoc7	99	77.612	ENSMFAG00000032653	THOC7	98	77.612	Macaca_fascicularis
ENSDARG00000015394	thoc7	98	76.768	ENSMMUG00000012783	THOC7	98	76.768	Macaca_mulatta
ENSDARG00000015394	thoc7	99	77.612	ENSMNEG00000035012	THOC7	98	77.612	Macaca_nemestrina
ENSDARG00000015394	thoc7	98	76.768	ENSMLEG00000041263	THOC7	98	77.835	Mandrillus_leucophaeus
ENSDARG00000015394	thoc7	91	84.239	ENSMAMG00000019803	thoc7	99	84.239	Mastacembelus_armatus
ENSDARG00000015394	thoc7	100	82.266	ENSMZEG00005011996	thoc7	100	82.266	Maylandia_zebra
ENSDARG00000015394	thoc7	75	78.571	ENSMGAG00000009059	THOC7	96	78.571	Meleagris_gallopavo
ENSDARG00000015394	thoc7	95	78.756	ENSMAUG00000002228	Thoc7	97	78.756	Mesocricetus_auratus
ENSDARG00000015394	thoc7	99	75.500	ENSMICG00000045229	THOC7	98	75.500	Microcebus_murinus
ENSDARG00000015394	thoc7	99	77.612	ENSMOCG00000019446	Thoc7	98	77.612	Microtus_ochrogaster
ENSDARG00000015394	thoc7	92	82.162	ENSMMOG00000000777	thoc7	100	82.162	Mola_mola
ENSDARG00000015394	thoc7	99	77.612	ENSMODG00000003009	THOC7	93	77.612	Monodelphis_domestica
ENSDARG00000015394	thoc7	99	77.500	MGP_CAROLIEiJ_G0018957	Thoc7	98	77.500	Mus_caroli
ENSDARG00000015394	thoc7	99	78.000	ENSMUSG00000053453	Thoc7	100	76.536	Mus_musculus
ENSDARG00000015394	thoc7	99	78.000	MGP_PahariEiJ_G0029971	Thoc7	98	78.000	Mus_pahari
ENSDARG00000015394	thoc7	99	78.000	MGP_SPRETEiJ_G0019833	Thoc7	98	78.000	Mus_spretus
ENSDARG00000015394	thoc7	98	65.327	ENSMPUG00000016928	THOC7	98	65.327	Mustela_putorius_furo
ENSDARG00000015394	thoc7	90	76.923	ENSMLUG00000003510	-	90	76.923	Myotis_lucifugus
ENSDARG00000015394	thoc7	96	77.320	ENSMLUG00000012060	-	96	77.320	Myotis_lucifugus
ENSDARG00000015394	thoc7	98	76.768	ENSNGAG00000022918	-	97	76.768	Nannospalax_galili
ENSDARG00000015394	thoc7	99	67.500	ENSNGAG00000010425	-	98	67.500	Nannospalax_galili
ENSDARG00000015394	thoc7	65	55.303	ENSNGAG00000001946	-	84	55.303	Nannospalax_galili
ENSDARG00000015394	thoc7	100	82.759	ENSNBRG00000020675	thoc7	100	82.759	Neolamprologus_brichardi
ENSDARG00000015394	thoc7	99	77.114	ENSNLEG00000011760	THOC7	98	77.114	Nomascus_leucogenys
ENSDARG00000015394	thoc7	57	75.214	ENSMEUG00000006342	THOC7	96	75.214	Notamacropus_eugenii
ENSDARG00000015394	thoc7	96	77.320	ENSOPRG00000016403	THOC7	98	77.320	Ochotona_princeps
ENSDARG00000015394	thoc7	96	77.320	ENSODEG00000000426	THOC7	97	77.320	Octodon_degus
ENSDARG00000015394	thoc7	100	82.759	ENSONIG00000020361	thoc7	100	82.759	Oreochromis_niloticus
ENSDARG00000015394	thoc7	67	78.832	ENSOANG00000015693	THOC7	97	74.667	Ornithorhynchus_anatinus
ENSDARG00000015394	thoc7	99	75.000	ENSOCUG00000021860	-	98	75.000	Oryctolagus_cuniculus
ENSDARG00000015394	thoc7	99	75.377	ENSOCUG00000009136	-	98	75.377	Oryctolagus_cuniculus
ENSDARG00000015394	thoc7	100	80.788	ENSORLG00000008192	thoc7	90	80.788	Oryzias_latipes
ENSDARG00000015394	thoc7	100	80.788	ENSORLG00020009776	thoc7	90	80.788	Oryzias_latipes_hni
ENSDARG00000015394	thoc7	100	80.788	ENSORLG00015005198	thoc7	100	80.788	Oryzias_latipes_hsok
ENSDARG00000015394	thoc7	100	81.773	ENSOMEG00000005739	thoc7	100	81.773	Oryzias_melastigma
ENSDARG00000015394	thoc7	93	80.319	ENSOGAG00000024865	THOC7	92	80.319	Otolemur_garnettii
ENSDARG00000015394	thoc7	96	77.436	ENSOARG00000011396	THOC7	98	77.436	Ovis_aries
ENSDARG00000015394	thoc7	99	77.114	ENSPPAG00000044086	THOC7	98	77.114	Pan_paniscus
ENSDARG00000015394	thoc7	96	76.804	ENSPPRG00000004022	THOC7	95	76.804	Panthera_pardus
ENSDARG00000015394	thoc7	96	76.923	ENSPTIG00000010860	THOC7	97	75.000	Panthera_tigris_altaica
ENSDARG00000015394	thoc7	99	77.114	ENSPTRG00000015076	THOC7	98	77.114	Pan_troglodytes
ENSDARG00000015394	thoc7	99	77.612	ENSPANG00000009531	THOC7	98	77.612	Papio_anubis
ENSDARG00000015394	thoc7	99	84.080	ENSPKIG00000023365	thoc7	99	84.103	Paramormyrops_kingsleyae
ENSDARG00000015394	thoc7	72	78.912	ENSPSIG00000002810	THOC7	97	78.912	Pelodiscus_sinensis
ENSDARG00000015394	thoc7	98	79.188	ENSPMGG00000001140	thoc7	97	79.188	Periophthalmus_magnuspinnatus
ENSDARG00000015394	thoc7	95	78.238	ENSPEMG00000000620	Thoc7	97	78.238	Peromyscus_maniculatus_bairdii
ENSDARG00000015394	thoc7	99	70.244	ENSPMAG00000001319	thoc7	98	70.244	Petromyzon_marinus
ENSDARG00000015394	thoc7	99	77.612	ENSPCIG00000012736	THOC7	98	77.612	Phascolarctos_cinereus
ENSDARG00000015394	thoc7	100	82.266	ENSPFOG00000010233	thoc7	100	82.266	Poecilia_formosa
ENSDARG00000015394	thoc7	100	82.266	ENSPLAG00000002693	thoc7	100	82.266	Poecilia_latipinna
ENSDARG00000015394	thoc7	100	81.773	ENSPMEG00000023493	thoc7	100	81.773	Poecilia_mexicana
ENSDARG00000015394	thoc7	100	81.773	ENSPREG00000018772	thoc7	100	81.773	Poecilia_reticulata
ENSDARG00000015394	thoc7	98	76.768	ENSPPYG00000013746	THOC7	89	76.768	Pongo_abelii
ENSDARG00000015394	thoc7	65	74.046	ENSPCAG00000006143	THOC7	100	74.046	Procavia_capensis
ENSDARG00000015394	thoc7	99	75.622	ENSPCOG00000011923	-	98	75.622	Propithecus_coquereli
ENSDARG00000015394	thoc7	99	77.114	ENSPCOG00000022000	-	98	77.114	Propithecus_coquereli
ENSDARG00000015394	thoc7	96	78.238	ENSPVAG00000012310	THOC7	95	78.238	Pteropus_vampyrus
ENSDARG00000015394	thoc7	100	82.759	ENSPNYG00000001260	thoc7	100	82.759	Pundamilia_nyererei
ENSDARG00000015394	thoc7	100	85.714	ENSPNAG00000003038	thoc7	100	85.714	Pygocentrus_nattereri
ENSDARG00000015394	thoc7	99	77.500	ENSRNOG00000007701	Thoc7	98	77.500	Rattus_norvegicus
ENSDARG00000015394	thoc7	99	65.174	ENSRBIG00000033497	THOC7	98	65.174	Rhinopithecus_bieti
ENSDARG00000015394	thoc7	99	77.114	ENSRROG00000008884	THOC7	98	77.114	Rhinopithecus_roxellana
ENSDARG00000015394	thoc7	98	76.884	ENSSBOG00000021884	THOC7	97	76.884	Saimiri_boliviensis_boliviensis
ENSDARG00000015394	thoc7	99	76.119	ENSSHAG00000011615	THOC7	98	76.119	Sarcophilus_harrisii
ENSDARG00000015394	thoc7	99	85.572	ENSSFOG00015018204	thoc7	99	85.572	Scleropages_formosus
ENSDARG00000015394	thoc7	100	81.773	ENSSMAG00000010488	thoc7	100	81.773	Scophthalmus_maximus
ENSDARG00000015394	thoc7	99	82.673	ENSSDUG00000022145	thoc7	89	84.783	Seriola_dumerili
ENSDARG00000015394	thoc7	100	82.759	ENSSLDG00000013770	thoc7	100	82.759	Seriola_lalandi_dorsalis
ENSDARG00000015394	thoc7	96	77.320	ENSSARG00000014279	-	98	77.320	Sorex_araneus
ENSDARG00000015394	thoc7	96	77.320	ENSSARG00000013894	-	98	77.320	Sorex_araneus
ENSDARG00000015394	thoc7	96	80.412	ENSSPUG00000011505	THOC7	97	80.412	Sphenodon_punctatus
ENSDARG00000015394	thoc7	100	82.759	ENSSPAG00000001047	thoc7	100	82.759	Stegastes_partitus
ENSDARG00000015394	thoc7	99	77.114	ENSSSCG00000011491	THOC7	98	77.114	Sus_scrofa
ENSDARG00000015394	thoc7	98	75.622	ENSTGUG00000009431	THOC7	98	75.622	Taeniopygia_guttata
ENSDARG00000015394	thoc7	100	81.683	ENSTRUG00000025690	thoc7	100	81.683	Takifugu_rubripes
ENSDARG00000015394	thoc7	100	79.208	ENSTNIG00000006681	thoc7	100	79.208	Tetraodon_nigroviridis
ENSDARG00000015394	thoc7	64	80.769	ENSTBEG00000007069	-	65	80.769	Tupaia_belangeri
ENSDARG00000015394	thoc7	95	69.430	ENSTBEG00000003371	-	97	69.430	Tupaia_belangeri
ENSDARG00000015394	thoc7	96	77.436	ENSTTRG00000013618	-	95	77.436	Tursiops_truncatus
ENSDARG00000015394	thoc7	74	69.333	ENSTTRG00000007980	-	96	69.333	Tursiops_truncatus
ENSDARG00000015394	thoc7	99	78.109	ENSUAMG00000002790	-	98	78.109	Ursus_americanus
ENSDARG00000015394	thoc7	73	76.351	ENSUMAG00000023513	-	97	76.351	Ursus_maritimus
ENSDARG00000015394	thoc7	93	68.617	ENSUMAG00000011864	-	95	68.617	Ursus_maritimus
ENSDARG00000015394	thoc7	96	77.436	ENSVPAG00000010083	THOC7	95	77.436	Vicugna_pacos
ENSDARG00000015394	thoc7	73	73.649	ENSVVUG00000014787	THOC7	97	73.649	Vulpes_vulpes
ENSDARG00000015394	thoc7	99	72.864	ENSXETG00000006539	thoc7	98	72.864	Xenopus_tropicalis
ENSDARG00000015394	thoc7	100	81.281	ENSXMAG00000002014	thoc7	100	81.281	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0000445	THO complex part of transcription export complex	-	IEA	Component
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	-	IEA	Component
GO:0051028	mRNA transport	-	IEA	Process