EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000015482 (Gene tree)
Gene ID: 503531
Gene Symbol: zgc:113518
Alias: -
Full Name: zgc:113518
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7341 bases
Position: chr2:176711-184051
Accession: ZDB-GENE-050220-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000153766	zf-C2H2	PF00096.26	9e-46	1	7
ENSDARP00000153766	zf-C2H2	PF00096.26	9e-46	2	7
ENSDARP00000153766	zf-C2H2	PF00096.26	9e-46	3	7
ENSDARP00000153766	zf-C2H2	PF00096.26	9e-46	4	7
ENSDARP00000153766	zf-C2H2	PF00096.26	9e-46	5	7
ENSDARP00000153766	zf-C2H2	PF00096.26	9e-46	6	7
ENSDARP00000153766	zf-C2H2	PF00096.26	9e-46	7	7
ENSDARP00000033134	zf-C2H2	PF00096.26	1.1e-45	1	7
ENSDARP00000033134	zf-C2H2	PF00096.26	1.1e-45	2	7
ENSDARP00000033134	zf-C2H2	PF00096.26	1.1e-45	3	7
ENSDARP00000033134	zf-C2H2	PF00096.26	1.1e-45	4	7
ENSDARP00000033134	zf-C2H2	PF00096.26	1.1e-45	5	7
ENSDARP00000033134	zf-C2H2	PF00096.26	1.1e-45	6	7
ENSDARP00000033134	zf-C2H2	PF00096.26	1.1e-45	7	7
ENSDARP00000108035	zf-C2H2	PF00096.26	1.1e-45	1	7
ENSDARP00000108035	zf-C2H2	PF00096.26	1.1e-45	2	7
ENSDARP00000108035	zf-C2H2	PF00096.26	1.1e-45	3	7
ENSDARP00000108035	zf-C2H2	PF00096.26	1.1e-45	4	7
ENSDARP00000108035	zf-C2H2	PF00096.26	1.1e-45	5	7
ENSDARP00000108035	zf-C2H2	PF00096.26	1.1e-45	6	7
ENSDARP00000108035	zf-C2H2	PF00096.26	1.1e-45	7	7
ENSDARP00000153766	zf-met	PF12874.7	4.7e-10	1	1
ENSDARP00000033134	zf-met	PF12874.7	5.4e-10	1	1
ENSDARP00000108035	zf-met	PF12874.7	5.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000034783	-	1757	-	ENSDARP00000033134	322 (aa)	-	F1QU11
ENSDART00000191283	-	1446	-	ENSDARP00000153766	315 (aa)	-	Q5EB12
ENSDART00000126704	-	1920	-	ENSDARP00000108035	322 (aa)	-	F1QU11

Gene Model

Click here to download ENSDARG00000015482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000015482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000015482	zgc:113518	98	50.211	ENSDARG00000071589	si:dkey-253d23.2	99	44.944
ENSDARG00000015482	zgc:113518	80	49.407	ENSDARG00000105075	BX324216.2	85	49.407
ENSDARG00000015482	zgc:113518	75	49.780	ENSDARG00000090740	zmp:0000001003	100	49.780
ENSDARG00000015482	zgc:113518	93	47.727	ENSDARG00000111614	znf1183	81	50.667
ENSDARG00000015482	zgc:113518	84	55.274	ENSDARG00000088051	AL935044.1	99	55.274
ENSDARG00000015482	zgc:113518	93	44.690	ENSDARG00000116765	zgc:162962	73	52.321
ENSDARG00000015482	zgc:113518	78	54.260	ENSDARG00000069869	zgc:113030	98	54.260
ENSDARG00000015482	zgc:113518	79	47.510	ENSDARG00000099618	si:dkey-1b17.6	91	47.510
ENSDARG00000015482	zgc:113518	79	49.798	ENSDARG00000104798	BX510922.2	89	49.798
ENSDARG00000015482	zgc:113518	99	48.592	ENSDARG00000097928	si:ch73-40a17.4	100	50.781
ENSDARG00000015482	zgc:113518	78	52.747	ENSDARG00000103530	zgc:113102	97	52.747
ENSDARG00000015482	zgc:113518	97	61.943	ENSDARG00000101562	znf1014	99	63.226

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000015482	zgc:113518	77	47.692	ENSACIG00000009780	-	73	47.692	Amphilophus_citrinellus
ENSDARG00000015482	zgc:113518	78	49.174	ENSAPEG00000012243	-	69	49.174	Amphiprion_percula
ENSDARG00000015482	zgc:113518	91	51.681	ENSATEG00000008320	-	76	53.521	Anabas_testudineus
ENSDARG00000015482	zgc:113518	96	46.559	ENSACLG00000020268	-	62	46.559	Astatotilapia_calliptera
ENSDARG00000015482	zgc:113518	78	47.899	ENSACLG00000020339	-	55	47.899	Astatotilapia_calliptera
ENSDARG00000015482	zgc:113518	78	40.444	ENSAMXG00000041862	-	96	43.902	Astyanax_mexicanus
ENSDARG00000015482	zgc:113518	79	47.541	ENSFHEG00000000374	-	68	47.541	Fundulus_heteroclitus
ENSDARG00000015482	zgc:113518	79	50.481	ENSGMOG00000020149	si:dkeyp-113d7.1	100	51.128	Gadus_morhua
ENSDARG00000015482	zgc:113518	84	41.958	ENSGAFG00000020503	-	50	41.958	Gambusia_affinis
ENSDARG00000015482	zgc:113518	93	50.000	ENSGAFG00000013969	-	91	48.744	Gambusia_affinis
ENSDARG00000015482	zgc:113518	96	50.000	ENSHBUG00000013518	-	97	50.000	Haplochromis_burtoni
ENSDARG00000015482	zgc:113518	81	45.933	ENSLOCG00000004661	-	99	45.933	Lepisosteus_oculatus
ENSDARG00000015482	zgc:113518	96	48.447	ENSMZEG00005010521	-	90	53.125	Maylandia_zebra
ENSDARG00000015482	zgc:113518	77	49.474	ENSMALG00000005203	-	94	49.474	Monopterus_albus
ENSDARG00000015482	zgc:113518	76	49.664	ENSPLAG00000007596	-	60	49.664	Poecilia_latipinna
ENSDARG00000015482	zgc:113518	87	45.175	ENSPLAG00000019635	-	60	45.175	Poecilia_latipinna
ENSDARG00000015482	zgc:113518	78	45.283	ENSPMEG00000010533	-	81	45.789	Poecilia_mexicana
ENSDARG00000015482	zgc:113518	92	38.776	ENSPMEG00000014783	-	60	47.525	Poecilia_mexicana
ENSDARG00000015482	zgc:113518	76	52.703	ENSPMEG00000023866	-	91	52.703	Poecilia_mexicana
ENSDARG00000015482	zgc:113518	86	45.000	ENSPREG00000003523	-	57	45.000	Poecilia_reticulata
ENSDARG00000015482	zgc:113518	79	48.800	ENSSFOG00015015958	-	54	48.800	Scleropages_formosus
ENSDARG00000015482	zgc:113518	97	41.593	ENSSDUG00000020788	-	61	46.847	Seriola_dumerili
ENSDARG00000015482	zgc:113518	76	45.536	ENSSDUG00000000889	-	75	45.536	Seriola_dumerili
ENSDARG00000015482	zgc:113518	82	46.622	ENSSLDG00000007524	-	56	47.297	Seriola_lalandi_dorsalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function