EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000015998 (Gene tree)
Gene ID: 436999
Gene Symbol: wdhd1
Alias: AND-1|wu:fa11f10|wu:fb77d12|zgc:92585
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 40706 bases
Position: chr17:15148797-15189502
Accession: ZDB-GENE-030131-1665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113096	eIF2A	PF08662.11	2e-05	1	1
ENSDARP00000099718	eIF2A	PF08662.11	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000133710	-	3665	XM_009292886	ENSDARP00000113096	1112 (aa)	XP_009291161	A0A0R4J7S6
ENSDART00000151885	-	499	-	ENSDARP00000126539	101 (aa)	-	K7DYL0
ENSDART00000138764	-	1466	-	ENSDARP00000115064	305 (aa)	-	F1Q7G1
ENSDART00000110507	-	4865	-	ENSDARP00000099718	1095 (aa)	-	E7F296

Gene Model

Click here to download ENSDARG00000015998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000015998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000015998	wdhd1	97	69.153	ENSG00000198554	WDHD1	100	78.571	Homo_sapiens
ENSDARG00000015998	wdhd1	97	77.703	ENSAPOG00000001560	wdhd1	99	70.682	Acanthochromis_polyacanthus
ENSDARG00000015998	wdhd1	97	70.508	ENSAMEG00000014356	WDHD1	100	59.496	Ailuropoda_melanoleuca
ENSDARG00000015998	wdhd1	96	78.231	ENSACIG00000021530	wdhd1	99	67.436	Amphilophus_citrinellus
ENSDARG00000015998	wdhd1	97	76.689	ENSAOCG00000018123	wdhd1	99	71.076	Amphiprion_ocellaris
ENSDARG00000015998	wdhd1	97	76.351	ENSAPEG00000000157	wdhd1	99	69.938	Amphiprion_percula
ENSDARG00000015998	wdhd1	97	77.365	ENSATEG00000021986	wdhd1	99	70.624	Anabas_testudineus
ENSDARG00000015998	wdhd1	97	70.508	ENSACAG00000016303	WDHD1	99	57.467	Anolis_carolinensis
ENSDARG00000015998	wdhd1	96	78.231	ENSACLG00000009036	wdhd1	99	71.353	Astatotilapia_calliptera
ENSDARG00000015998	wdhd1	99	77.961	ENSAMXG00000043712	wdhd1	98	79.264	Astyanax_mexicanus
ENSDARG00000015998	wdhd1	97	71.186	ENSBTAG00000019120	WDHD1	100	59.737	Bos_taurus
ENSDARG00000015998	wdhd1	97	69.153	ENSCJAG00000018208	WDHD1	100	59.419	Callithrix_jacchus
ENSDARG00000015998	wdhd1	89	57.073	ENSCAFG00000014989	WDHD1	99	56.453	Canis_familiaris
ENSDARG00000015998	wdhd1	97	70.169	ENSCHIG00000017956	WDHD1	100	59.455	Capra_hircus
ENSDARG00000015998	wdhd1	97	68.814	ENSTSYG00000000266	WDHD1	100	57.756	Carlito_syrichta
ENSDARG00000015998	wdhd1	97	69.153	ENSCCAG00000018389	WDHD1	95	73.868	Cebus_capucinus
ENSDARG00000015998	wdhd1	97	69.831	ENSCATG00000035221	WDHD1	100	59.047	Cercocebus_atys
ENSDARG00000015998	wdhd1	97	70.847	ENSCLAG00000013863	-	99	64.780	Chinchilla_lanigera
ENSDARG00000015998	wdhd1	88	70.149	ENSCSAG00000014757	WDHD1	99	58.792	Chlorocebus_sabaeus
ENSDARG00000015998	wdhd1	97	70.847	ENSCPBG00000020071	WDHD1	99	60.070	Chrysemys_picta_bellii
ENSDARG00000015998	wdhd1	97	69.831	ENSCANG00000037721	WDHD1	100	65.517	Colobus_angolensis_palliatus
ENSDARG00000015998	wdhd1	100	74.183	ENSCVAG00000006106	wdhd1	96	74.183	Cyprinodon_variegatus
ENSDARG00000015998	wdhd1	97	68.814	ENSDNOG00000006661	WDHD1	92	61.380	Dasypus_novemcinctus
ENSDARG00000015998	wdhd1	97	57.288	ENSEASG00005003136	-	92	57.191	Equus_asinus_asinus
ENSDARG00000015998	wdhd1	97	71.186	ENSECAG00000015412	WDHD1	97	59.545	Equus_caballus
ENSDARG00000015998	wdhd1	97	80.068	ENSELUG00000015575	wdhd1	98	78.224	Esox_lucius
ENSDARG00000015998	wdhd1	97	69.492	ENSFCAG00000023408	-	100	59.438	Felis_catus
ENSDARG00000015998	wdhd1	99	76.974	ENSFHEG00000009177	-	96	78.405	Fundulus_heteroclitus
ENSDARG00000015998	wdhd1	97	71.525	ENSGALG00000012199	WDHD1	99	59.651	Gallus_gallus
ENSDARG00000015998	wdhd1	96	76.190	ENSGACG00000017321	wdhd1	99	58.079	Gasterosteus_aculeatus
ENSDARG00000015998	wdhd1	97	70.847	ENSGAGG00000010665	-	94	66.385	Gopherus_agassizii
ENSDARG00000015998	wdhd1	97	69.492	ENSGGOG00000007744	WDHD1	100	59.039	Gorilla_gorilla
ENSDARG00000015998	wdhd1	97	78.716	ENSHBUG00000015846	-	98	78.930	Haplochromis_burtoni
ENSDARG00000015998	wdhd1	97	69.153	ENSHGLG00000015105	WDHD1	100	58.927	Heterocephalus_glaber_female
ENSDARG00000015998	wdhd1	97	69.153	ENSHGLG00100001967	WDHD1	100	57.840	Heterocephalus_glaber_male
ENSDARG00000015998	wdhd1	97	77.027	ENSHCOG00000007286	wdhd1	100	65.841	Hippocampus_comes
ENSDARG00000015998	wdhd1	97	69.153	ENSSTOG00000020300	WDHD1	99	58.150	Ictidomys_tridecemlineatus
ENSDARG00000015998	wdhd1	97	59.933	ENSJJAG00000001164	Wdhd1	100	53.227	Jaculus_jaculus
ENSDARG00000015998	wdhd1	98	77.852	ENSLBEG00000024847	wdhd1	99	69.798	Labrus_bergylta
ENSDARG00000015998	wdhd1	97	69.799	ENSLACG00000019053	WDHD1	99	57.835	Latimeria_chalumnae
ENSDARG00000015998	wdhd1	97	78.378	ENSLOCG00000012086	wdhd1	99	69.029	Lepisosteus_oculatus
ENSDARG00000015998	wdhd1	97	70.270	ENSLAFG00000005385	WDHD1	100	59.012	Loxodonta_africana
ENSDARG00000015998	wdhd1	97	69.831	ENSMFAG00000032915	WDHD1	100	59.047	Macaca_fascicularis
ENSDARG00000015998	wdhd1	97	69.831	ENSMMUG00000000302	WDHD1	100	59.031	Macaca_mulatta
ENSDARG00000015998	wdhd1	97	69.831	ENSMNEG00000032489	WDHD1	100	59.047	Macaca_nemestrina
ENSDARG00000015998	wdhd1	97	69.831	ENSMLEG00000035661	WDHD1	100	59.047	Mandrillus_leucophaeus
ENSDARG00000015998	wdhd1	97	79.054	ENSMAMG00000016742	wdhd1	99	70.745	Mastacembelus_armatus
ENSDARG00000015998	wdhd1	96	74.490	ENSMZEG00005025682	-	95	74.834	Maylandia_zebra
ENSDARG00000015998	wdhd1	96	78.571	ENSMZEG00005015228	wdhd1	99	71.441	Maylandia_zebra
ENSDARG00000015998	wdhd1	97	71.525	ENSMGAG00000013676	WDHD1	99	58.594	Meleagris_gallopavo
ENSDARG00000015998	wdhd1	97	68.814	ENSMICG00000016239	WDHD1	100	58.341	Microcebus_murinus
ENSDARG00000015998	wdhd1	97	79.322	ENSMMOG00000007869	wdhd1	99	68.178	Mola_mola
ENSDARG00000015998	wdhd1	97	70.169	ENSMODG00000011703	WDHD1	100	58.509	Monodelphis_domestica
ENSDARG00000015998	wdhd1	97	67.797	MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.538	Mus_caroli
ENSDARG00000015998	wdhd1	97	67.458	MGP_PahariEiJ_G0030180	Wdhd1	98	61.815	Mus_pahari
ENSDARG00000015998	wdhd1	97	69.831	ENSMPUG00000005542	WDHD1	100	55.875	Mustela_putorius_furo
ENSDARG00000015998	wdhd1	97	70.508	ENSMLUG00000010353	WDHD1	100	60.176	Myotis_lucifugus
ENSDARG00000015998	wdhd1	96	78.571	ENSNBRG00000010071	wdhd1	99	71.034	Neolamprologus_brichardi
ENSDARG00000015998	wdhd1	97	69.153	ENSNLEG00000012760	WDHD1	100	57.895	Nomascus_leucogenys
ENSDARG00000015998	wdhd1	97	55.254	ENSMEUG00000006706	WDHD1	78	77.876	Notamacropus_eugenii
ENSDARG00000015998	wdhd1	96	79.592	ENSONIG00000007084	wdhd1	99	70.863	Oreochromis_niloticus
ENSDARG00000015998	wdhd1	88	73.408	ENSOANG00000015129	-	100	73.408	Ornithorhynchus_anatinus
ENSDARG00000015998	wdhd1	97	69.831	ENSOCUG00000004987	WDHD1	100	58.560	Oryctolagus_cuniculus
ENSDARG00000015998	wdhd1	97	76.689	ENSORLG00000019721	wdhd1	98	65.888	Oryzias_latipes
ENSDARG00000015998	wdhd1	97	77.027	ENSORLG00020007040	wdhd1	99	67.702	Oryzias_latipes_hni
ENSDARG00000015998	wdhd1	97	77.027	ENSORLG00015008848	wdhd1	99	67.848	Oryzias_latipes_hsok
ENSDARG00000015998	wdhd1	63	68.229	ENSOMEG00000019072	wdhd1	65	70.968	Oryzias_melastigma
ENSDARG00000015998	wdhd1	97	69.831	ENSOGAG00000003465	WDHD1	100	58.260	Otolemur_garnettii
ENSDARG00000015998	wdhd1	97	70.169	ENSOARG00000021081	WDHD1	100	59.825	Ovis_aries
ENSDARG00000015998	wdhd1	97	69.831	ENSPPAG00000035486	WDHD1	100	58.101	Pan_paniscus
ENSDARG00000015998	wdhd1	97	69.153	ENSPPRG00000007679	WDHD1	100	59.438	Panthera_pardus
ENSDARG00000015998	wdhd1	97	69.831	ENSPTIG00000013608	WDHD1	100	59.509	Panthera_tigris_altaica
ENSDARG00000015998	wdhd1	97	69.831	ENSPTRG00000006366	WDHD1	100	59.266	Pan_troglodytes
ENSDARG00000015998	wdhd1	97	69.831	ENSPANG00000017506	WDHD1	100	58.959	Papio_anubis
ENSDARG00000015998	wdhd1	97	76.689	ENSPKIG00000004863	wdhd1	99	64.858	Paramormyrops_kingsleyae
ENSDARG00000015998	wdhd1	97	70.169	ENSPSIG00000011635	WDHD1	99	60.750	Pelodiscus_sinensis
ENSDARG00000015998	wdhd1	90	69.231	ENSPLAG00000009199	wdhd1	92	69.888	Poecilia_latipinna
ENSDARG00000015998	wdhd1	97	69.492	ENSPPYG00000005834	WDHD1	100	59.250	Pongo_abelii
ENSDARG00000015998	wdhd1	97	63.051	ENSPVAG00000016064	WDHD1	100	53.731	Pteropus_vampyrus
ENSDARG00000015998	wdhd1	100	77.124	ENSPNYG00000019115	wdhd1	97	77.124	Pundamilia_nyererei
ENSDARG00000015998	wdhd1	97	82.432	ENSPNAG00000013823	wdhd1	100	75.880	Pygocentrus_nattereri
ENSDARG00000015998	wdhd1	97	66.780	ENSRNOG00000011167	Wdhd1	100	56.525	Rattus_norvegicus
ENSDARG00000015998	wdhd1	97	69.831	ENSRROG00000006993	WDHD1	100	58.870	Rhinopithecus_roxellana
ENSDARG00000015998	wdhd1	97	69.492	ENSSBOG00000034847	WDHD1	100	56.014	Saimiri_boliviensis_boliviensis
ENSDARG00000015998	wdhd1	98	57.092	ENSSHAG00000013551	WDHD1	100	56.658	Sarcophilus_harrisii
ENSDARG00000015998	wdhd1	97	79.730	ENSSFOG00015009950	wdhd1	99	69.546	Scleropages_formosus
ENSDARG00000015998	wdhd1	97	80.743	ENSSMAG00000007346	wdhd1	99	70.202	Scophthalmus_maximus
ENSDARG00000015998	wdhd1	99	67.417	ENSSDUG00000016996	wdhd1	99	67.707	Seriola_dumerili
ENSDARG00000015998	wdhd1	97	79.730	ENSSLDG00000021689	wdhd1	98	77.532	Seriola_lalandi_dorsalis
ENSDARG00000015998	wdhd1	100	68.197	ENSSPUG00000004721	-	96	68.197	Sphenodon_punctatus
ENSDARG00000015998	wdhd1	97	70.169	ENSSSCG00000005052	WDHD1	100	59.561	Sus_scrofa
ENSDARG00000015998	wdhd1	96	79.252	ENSTRUG00000015390	-	96	79.139	Takifugu_rubripes
ENSDARG00000015998	wdhd1	97	76.610	ENSTNIG00000018803	wdhd1	99	68.375	Tetraodon_nigroviridis
ENSDARG00000015998	wdhd1	97	70.508	ENSTTRG00000003314	WDHD1	100	57.030	Tursiops_truncatus
ENSDARG00000015998	wdhd1	97	70.508	ENSUAMG00000015360	-	96	65.702	Ursus_americanus
ENSDARG00000015998	wdhd1	97	70.508	ENSUMAG00000015946	WDHD1	100	59.246	Ursus_maritimus
ENSDARG00000015998	wdhd1	97	69.831	ENSVPAG00000008394	WDHD1	100	59.334	Vicugna_pacos
ENSDARG00000015998	wdhd1	97	68.814	ENSVVUG00000029613	WDHD1	95	68.874	Vulpes_vulpes
ENSDARG00000015998	wdhd1	97	65.085	ENSXETG00000012210	wdhd1	100	57.428	Xenopus_tropicalis
ENSDARG00000015998	wdhd1	97	77.027	ENSXCOG00000000845	-	92	77.258	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	21873635.	IBA	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006261	DNA-dependent DNA replication	21873635.	IBA	Process
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0008150	biological_process	-	ND	Process
GO:0031298	replication fork protection complex	21873635.	IBA	Component
GO:0043596	nuclear replication fork	21873635.	IBA	Component