EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000016188 (Gene tree)
Gene ID: 100002292
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno|si:dkey-19f23.4
Full Name: si:ch73-63e15.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 89833 bases
Position: chr22:17691381-17781213
Accession: ZDB-GENE-091204-463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000145174	ResIII	PF04851.15	2.1e-07	1	1
ENSDARP00000121656	ResIII	PF04851.15	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000192132	SBNO2-201	7377	XM_009296339	ENSDARP00000145174	1380 (aa)	XP_009294614	A0A2R8PYX0
ENSDART00000137984	SBNO2-202	7039	XM_001342080	ENSDARP00000121656	1452 (aa)	XP_001342116	E7F5T6

Gene Model

Click here to download ENSDARG00000016188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000016188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000016188	SBNO2	68	63.383	ENSDARG00000099080	sbno1	74	60.159
ENSDARG00000016188	SBNO2	90	69.062	ENSDARG00000098801	sbno2a	99	66.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000016188	SBNO2	82	67.324	ENSG00000064932	SBNO2	88	67.808	Homo_sapiens
ENSDARG00000016188	SBNO2	98	79.631	ENSAPOG00000003185	si:ch73-63e15.2	93	75.745	Acanthochromis_polyacanthus
ENSDARG00000016188	SBNO2	99	79.868	ENSAOCG00000016581	si:ch73-63e15.2	94	80.882	Amphiprion_ocellaris
ENSDARG00000016188	SBNO2	99	79.950	ENSAPEG00000008862	si:ch73-63e15.2	99	68.551	Amphiprion_percula
ENSDARG00000016188	SBNO2	100	68.074	ENSATEG00000023838	si:ch73-63e15.2	99	77.051	Anabas_testudineus
ENSDARG00000016188	SBNO2	88	66.244	ENSAPLG00000007158	SBNO2	96	65.388	Anas_platyrhynchos
ENSDARG00000016188	SBNO2	82	67.068	ENSANAG00000026685	SBNO2	89	67.382	Aotus_nancymaae
ENSDARG00000016188	SBNO2	85	78.894	ENSACLG00000005090	si:ch73-63e15.2	88	71.043	Astatotilapia_calliptera
ENSDARG00000016188	SBNO2	100	73.146	ENSAMXG00000015881	si:ch73-63e15.2	100	73.060	Astyanax_mexicanus
ENSDARG00000016188	SBNO2	83	75.214	ENSAMXG00000018868	sbno2a	95	77.661	Astyanax_mexicanus
ENSDARG00000016188	SBNO2	82	67.639	ENSBTAG00000020780	SBNO2	88	67.639	Bos_taurus
ENSDARG00000016188	SBNO2	81	68.761	ENSCAFG00000019543	SBNO2	90	64.598	Canis_familiaris
ENSDARG00000016188	SBNO2	81	68.761	ENSCAFG00020017115	SBNO2	96	64.598	Canis_lupus_dingo
ENSDARG00000016188	SBNO2	81	68.265	ENSCHIG00000026127	SBNO2	85	68.325	Capra_hircus
ENSDARG00000016188	SBNO2	80	65.611	ENSCAPG00000005731	SBNO2	97	65.063	Cavia_aperea
ENSDARG00000016188	SBNO2	81	65.415	ENSCPOG00000007477	SBNO2	90	64.642	Cavia_porcellus
ENSDARG00000016188	SBNO2	82	66.438	ENSCCAG00000037518	SBNO2	89	66.924	Cebus_capucinus
ENSDARG00000016188	SBNO2	82	67.551	ENSCATG00000037046	SBNO2	88	67.723	Cercocebus_atys
ENSDARG00000016188	SBNO2	82	67.786	ENSCLAG00000010178	SBNO2	99	68.320	Chinchilla_lanigera
ENSDARG00000016188	SBNO2	80	68.850	ENSCSAG00000012317	SBNO2	90	64.560	Chlorocebus_sabaeus
ENSDARG00000016188	SBNO2	91	63.170	ENSCPBG00000008920	SBNO2	92	69.145	Chrysemys_picta_bellii
ENSDARG00000016188	SBNO2	78	67.382	ENSCANG00000036745	SBNO2	96	67.560	Colobus_angolensis_palliatus
ENSDARG00000016188	SBNO2	81	65.969	ENSCGRG00001023960	Sbno2	85	66.033	Cricetulus_griseus_chok1gshd
ENSDARG00000016188	SBNO2	81	67.306	ENSCGRG00000011984	Sbno2	85	67.358	Cricetulus_griseus_crigri
ENSDARG00000016188	SBNO2	84	75.531	ENSCSEG00000006856	si:ch73-63e15.2	94	80.000	Cynoglossus_semilaevis
ENSDARG00000016188	SBNO2	87	77.997	ENSCVAG00000005663	si:ch73-63e15.2	100	68.176	Cyprinodon_variegatus
ENSDARG00000016188	SBNO2	81	67.542	ENSDORG00000002916	Sbno2	91	64.029	Dipodomys_ordii
ENSDARG00000016188	SBNO2	82	67.642	ENSEASG00005021621	SBNO2	89	67.869	Equus_asinus_asinus
ENSDARG00000016188	SBNO2	82	67.384	ENSECAG00000011827	SBNO2	89	67.869	Equus_caballus
ENSDARG00000016188	SBNO2	99	70.592	ENSELUG00000020457	si:ch73-63e15.2	100	69.041	Esox_lucius
ENSDARG00000016188	SBNO2	87	66.855	ENSFALG00000013988	SBNO2	97	62.121	Ficedula_albicollis
ENSDARG00000016188	SBNO2	78	66.878	ENSFDAG00000015186	SBNO2	85	67.175	Fukomys_damarensis
ENSDARG00000016188	SBNO2	86	78.210	ENSFHEG00000022262	si:ch73-63e15.2	99	67.523	Fundulus_heteroclitus
ENSDARG00000016188	SBNO2	81	80.834	ENSGMOG00000007542	si:ch73-63e15.2	95	80.834	Gadus_morhua
ENSDARG00000016188	SBNO2	99	61.845	ENSGALG00000037522	SBNO2	90	65.728	Gallus_gallus
ENSDARG00000016188	SBNO2	83	81.126	ENSGAFG00000004860	si:ch73-63e15.2	92	81.385	Gambusia_affinis
ENSDARG00000016188	SBNO2	81	79.634	ENSGACG00000013190	si:ch73-63e15.2	95	79.376	Gasterosteus_aculeatus
ENSDARG00000016188	SBNO2	99	62.199	ENSGAGG00000008348	SBNO2	88	68.509	Gopherus_agassizii
ENSDARG00000016188	SBNO2	85	78.877	ENSHBUG00000010742	si:ch73-63e15.2	100	73.152	Haplochromis_burtoni
ENSDARG00000016188	SBNO2	80	68.218	ENSHGLG00000008739	SBNO2	87	66.307	Heterocephalus_glaber_female
ENSDARG00000016188	SBNO2	82	67.352	ENSHGLG00100005269	SBNO2	99	67.879	Heterocephalus_glaber_male
ENSDARG00000016188	SBNO2	86	75.853	ENSHCOG00000000884	si:ch73-63e15.2	96	72.958	Hippocampus_comes
ENSDARG00000016188	SBNO2	91	71.855	ENSIPUG00000019672	sbno2	99	73.475	Ictalurus_punctatus
ENSDARG00000016188	SBNO2	82	82.193	ENSIPUG00000000537	si:ch73-63e15.2	99	72.198	Ictalurus_punctatus
ENSDARG00000016188	SBNO2	79	68.605	ENSSTOG00000025832	SBNO2	91	65.971	Ictidomys_tridecemlineatus
ENSDARG00000016188	SBNO2	81	65.617	ENSJJAG00000017397	Sbno2	91	62.853	Jaculus_jaculus
ENSDARG00000016188	SBNO2	99	68.892	ENSKMAG00000005541	si:ch73-63e15.2	99	68.896	Kryptolebias_marmoratus
ENSDARG00000016188	SBNO2	86	78.713	ENSLBEG00000025016	si:ch73-63e15.2	95	81.818	Labrus_bergylta
ENSDARG00000016188	SBNO2	98	72.464	ENSLOCG00000004643	si:ch73-63e15.2	99	72.214	Lepisosteus_oculatus
ENSDARG00000016188	SBNO2	80	65.603	ENSLAFG00000008824	SBNO2	89	65.398	Loxodonta_africana
ENSDARG00000016188	SBNO2	82	66.153	ENSMFAG00000040030	SBNO2	90	66.324	Macaca_fascicularis
ENSDARG00000016188	SBNO2	80	68.938	ENSMMUG00000010886	SBNO2	90	64.640	Macaca_mulatta
ENSDARG00000016188	SBNO2	82	67.466	ENSMNEG00000039927	SBNO2	88	67.637	Macaca_nemestrina
ENSDARG00000016188	SBNO2	73	70.039	ENSMLEG00000038556	SBNO2	98	65.285	Mandrillus_leucophaeus
ENSDARG00000016188	SBNO2	86	79.665	ENSMAMG00000018758	si:ch73-63e15.2	94	79.665	Mastacembelus_armatus
ENSDARG00000016188	SBNO2	91	73.866	ENSMZEG00005010682	si:ch73-63e15.2	88	71.023	Maylandia_zebra
ENSDARG00000016188	SBNO2	83	69.529	ENSMGAG00000003801	SBNO2	91	69.309	Meleagris_gallopavo
ENSDARG00000016188	SBNO2	81	67.657	ENSMAUG00000008034	Sbno2	90	65.105	Mesocricetus_auratus
ENSDARG00000016188	SBNO2	82	67.440	ENSMICG00000013071	SBNO2	89	67.753	Microcebus_murinus
ENSDARG00000016188	SBNO2	81	67.190	ENSMOCG00000010504	Sbno2	85	67.537	Microtus_ochrogaster
ENSDARG00000016188	SBNO2	81	69.652	ENSMODG00000005382	SBNO2	84	67.947	Monodelphis_domestica
ENSDARG00000016188	SBNO2	67	74.758	ENSMALG00000021831	si:ch73-63e15.2	96	74.758	Monopterus_albus
ENSDARG00000016188	SBNO2	81	66.784	ENSMUSG00000035673	Sbno2	93	67.539	Mus_musculus
ENSDARG00000016188	SBNO2	81	66.608	MGP_PahariEiJ_G0030976	Sbno2	91	64.107	Mus_pahari
ENSDARG00000016188	SBNO2	81	67.134	MGP_SPRETEiJ_G0016381	Sbno2	90	67.888	Mus_spretus
ENSDARG00000016188	SBNO2	69	70.863	ENSMPUG00000008747	SBNO2	91	70.183	Mustela_putorius_furo
ENSDARG00000016188	SBNO2	81	67.277	ENSNGAG00000004308	Sbno2	93	63.923	Nannospalax_galili
ENSDARG00000016188	SBNO2	78	81.005	ENSNBRG00000022968	si:ch73-63e15.2	93	86.315	Neolamprologus_brichardi
ENSDARG00000016188	SBNO2	77	65.207	ENSNLEG00000001305	SBNO2	89	65.721	Nomascus_leucogenys
ENSDARG00000016188	SBNO2	67	65.254	ENSMEUG00000013511	-	78	65.254	Notamacropus_eugenii
ENSDARG00000016188	SBNO2	79	68.643	ENSOPRG00000017238	SBNO2	93	68.421	Ochotona_princeps
ENSDARG00000016188	SBNO2	80	66.929	ENSODEG00000011822	SBNO2	90	64.653	Octodon_degus
ENSDARG00000016188	SBNO2	90	76.564	ENSONIG00000002490	si:ch73-63e15.2	99	76.247	Oreochromis_niloticus
ENSDARG00000016188	SBNO2	99	67.742	ENSORLG00000000913	si:ch73-63e15.2	99	67.381	Oryzias_latipes
ENSDARG00000016188	SBNO2	82	79.965	ENSORLG00020010978	si:ch73-63e15.2	79	78.767	Oryzias_latipes_hni
ENSDARG00000016188	SBNO2	82	79.965	ENSORLG00015000202	si:ch73-63e15.2	99	67.722	Oryzias_latipes_hsok
ENSDARG00000016188	SBNO2	98	68.000	ENSOMEG00000000359	si:ch73-63e15.2	99	65.524	Oryzias_melastigma
ENSDARG00000016188	SBNO2	81	65.126	ENSOARG00000011130	SBNO2	93	61.866	Ovis_aries
ENSDARG00000016188	SBNO2	82	66.497	ENSPPAG00000032482	SBNO2	90	66.978	Pan_paniscus
ENSDARG00000016188	SBNO2	82	67.324	ENSPTRG00000010185	SBNO2	89	67.032	Pan_troglodytes
ENSDARG00000016188	SBNO2	82	64.212	ENSPANG00000009658	SBNO2	88	64.384	Papio_anubis
ENSDARG00000016188	SBNO2	99	70.555	ENSPKIG00000024201	si:ch73-63e15.2	88	77.250	Paramormyrops_kingsleyae
ENSDARG00000016188	SBNO2	87	67.386	ENSPKIG00000009707	-	88	73.535	Paramormyrops_kingsleyae
ENSDARG00000016188	SBNO2	68	72.774	ENSPSIG00000002852	SBNO2	99	72.131	Pelodiscus_sinensis
ENSDARG00000016188	SBNO2	85	75.678	ENSPMGG00000014375	si:ch73-63e15.2	90	76.150	Periophthalmus_magnuspinnatus
ENSDARG00000016188	SBNO2	81	66.813	ENSPEMG00000024122	Sbno2	91	63.695	Peromyscus_maniculatus_bairdii
ENSDARG00000016188	SBNO2	79	70.991	ENSPCIG00000011264	SBNO2	89	66.139	Phascolarctos_cinereus
ENSDARG00000016188	SBNO2	98	67.540	ENSPFOG00000004096	si:ch73-63e15.2	99	78.740	Poecilia_formosa
ENSDARG00000016188	SBNO2	86	79.239	ENSPLAG00000014653	si:ch73-63e15.2	83	77.796	Poecilia_latipinna
ENSDARG00000016188	SBNO2	99	68.000	ENSPMEG00000002129	si:ch73-63e15.2	96	76.660	Poecilia_mexicana
ENSDARG00000016188	SBNO2	98	67.048	ENSPREG00000006755	si:ch73-63e15.2	99	66.498	Poecilia_reticulata
ENSDARG00000016188	SBNO2	86	62.270	ENSPCAG00000012256	SBNO2	87	62.354	Procavia_capensis
ENSDARG00000016188	SBNO2	82	60.739	ENSPCOG00000015216	SBNO2	90	59.102	Propithecus_coquereli
ENSDARG00000016188	SBNO2	87	78.960	ENSPNYG00000019926	si:ch73-63e15.2	100	73.152	Pundamilia_nyererei
ENSDARG00000016188	SBNO2	90	70.140	ENSPNAG00000026609	sbno2a	83	77.924	Pygocentrus_nattereri
ENSDARG00000016188	SBNO2	89	78.681	ENSPNAG00000020260	si:ch73-63e15.2	100	73.658	Pygocentrus_nattereri
ENSDARG00000016188	SBNO2	81	67.367	ENSRNOG00000013987	Sbno2	89	68.122	Rattus_norvegicus
ENSDARG00000016188	SBNO2	76	67.227	ENSRBIG00000009740	SBNO2	87	67.227	Rhinopithecus_bieti
ENSDARG00000016188	SBNO2	72	71.770	ENSRROG00000044671	SBNO2	86	71.770	Rhinopithecus_roxellana
ENSDARG00000016188	SBNO2	82	66.266	ENSSBOG00000023562	SBNO2	89	66.752	Saimiri_boliviensis_boliviensis
ENSDARG00000016188	SBNO2	80	70.133	ENSSHAG00000010241	SBNO2	97	70.133	Sarcophilus_harrisii
ENSDARG00000016188	SBNO2	98	67.804	ENSSFOG00015005861	si:ch73-63e15.2	99	75.820	Scleropages_formosus
ENSDARG00000016188	SBNO2	97	73.077	ENSSMAG00000012489	si:ch73-63e15.2	77	79.732	Scophthalmus_maximus
ENSDARG00000016188	SBNO2	86	80.553	ENSSDUG00000003527	si:ch73-63e15.2	76	80.553	Seriola_dumerili
ENSDARG00000016188	SBNO2	86	79.950	ENSSLDG00000004623	si:ch73-63e15.2	77	79.817	Seriola_lalandi_dorsalis
ENSDARG00000016188	SBNO2	87	80.000	ENSSPAG00000017717	si:ch73-63e15.2	99	68.134	Stegastes_partitus
ENSDARG00000016188	SBNO2	83	68.116	ENSSSCG00000030042	SBNO2	90	68.471	Sus_scrofa
ENSDARG00000016188	SBNO2	79	79.837	ENSTRUG00000018193	si:ch73-63e15.2	86	79.928	Takifugu_rubripes
ENSDARG00000016188	SBNO2	74	69.304	ENSUAMG00000006568	SBNO2	91	74.082	Ursus_americanus
ENSDARG00000016188	SBNO2	81	68.848	ENSVVUG00000022823	SBNO2	89	64.992	Vulpes_vulpes
ENSDARG00000016188	SBNO2	74	76.721	ENSXETG00000021579	sbno2	91	77.126	Xenopus_tropicalis
ENSDARG00000016188	SBNO2	75	80.021	ENSXCOG00000009209	si:ch73-63e15.2	94	79.581	Xiphophorus_couchianus
ENSDARG00000016188	SBNO2	87	78.318	ENSXMAG00000012091	si:ch73-63e15.2	99	68.688	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0050727	regulation of inflammatory response	-	IEA	Process