EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000016543 (Gene tree)
Gene ID: 550390
Gene Symbol: mrm3a
Alias: rnmtl1|rnmtl1a|zgc:112452
Full Name: mitochondrial rRNA methyltransferase 3a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7091 bases
Position: chr15:16185118-16192208
Accession: ZDB-GENE-050417-184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000119941	SpoU_methylase	PF00588.19	1.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000147900	-	1370	-	ENSDARP00000119941	443 (aa)	-	F1R7U4

Gene Model

Click here to download ENSDARG00000016543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000016543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000016543	mrm3a	90	45.476	ENSDARG00000069082	mrm3b	75	49.565

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000016543	mrm3a	95	50.340	ENSAPOG00000002497	mrm3b	96	50.797	Acanthochromis_polyacanthus
ENSDARG00000016543	mrm3a	95	55.581	ENSACIG00000007921	mrm3b	97	54.795	Amphilophus_citrinellus
ENSDARG00000016543	mrm3a	94	52.455	ENSAOCG00000023615	mrm3b	96	52.232	Amphiprion_ocellaris
ENSDARG00000016543	mrm3a	95	52.655	ENSAPEG00000009402	mrm3b	96	52.434	Amphiprion_percula
ENSDARG00000016543	mrm3a	98	51.304	ENSATEG00000022280	mrm3b	99	51.087	Anabas_testudineus
ENSDARG00000016543	mrm3a	90	46.860	ENSACAG00000015977	-	79	52.812	Anolis_carolinensis
ENSDARG00000016543	mrm3a	93	52.740	ENSACLG00000005833	mrm3b	93	52.055	Astatotilapia_calliptera
ENSDARG00000016543	mrm3a	97	58.352	ENSAMXG00000030559	mrm3a	98	58.447	Astyanax_mexicanus
ENSDARG00000016543	mrm3a	94	47.430	ENSBTAG00000019162	MRM3	77	54.088	Bos_taurus
ENSDARG00000016543	mrm3a	88	48.768	ENSCPBG00000015794	-	69	54.878	Chrysemys_picta_bellii
ENSDARG00000016543	mrm3a	92	53.075	ENSCSEG00000013521	mrm3b	87	54.791	Cynoglossus_semilaevis
ENSDARG00000016543	mrm3a	70	33.438	FBgn0036889	CG14100	72	33.333	Drosophila_melanogaster
ENSDARG00000016543	mrm3a	98	50.985	ENSFHEG00000003298	mrm3b	98	51.429	Fundulus_heteroclitus
ENSDARG00000016543	mrm3a	95	54.233	ENSGAFG00000012768	mrm3b	96	54.233	Gambusia_affinis
ENSDARG00000016543	mrm3a	93	52.740	ENSHBUG00000017040	mrm3b	94	52.283	Haplochromis_burtoni
ENSDARG00000016543	mrm3a	91	52.913	ENSHCOG00000015618	mrm3b	80	57.759	Hippocampus_comes
ENSDARG00000016543	mrm3a	70	53.517	ENSIPUG00000005839	mrm3b	73	52.599	Ictalurus_punctatus
ENSDARG00000016543	mrm3a	98	61.048	ENSIPUG00000016782	mrm3	99	61.124	Ictalurus_punctatus
ENSDARG00000016543	mrm3a	95	55.125	ENSKMAG00000019066	mrm3b	97	54.214	Kryptolebias_marmoratus
ENSDARG00000016543	mrm3a	98	50.441	ENSLBEG00000021262	mrm3b	99	50.881	Labrus_bergylta
ENSDARG00000016543	mrm3a	91	51.963	ENSMAMG00000018298	mrm3b	99	49.892	Mastacembelus_armatus
ENSDARG00000016543	mrm3a	93	52.740	ENSMZEG00005007844	mrm3b	94	52.055	Maylandia_zebra
ENSDARG00000016543	mrm3a	89	57.960	ENSMALG00000017429	mrm3b	91	57.107	Monopterus_albus
ENSDARG00000016543	mrm3a	94	52.135	ENSNBRG00000020148	mrm3b	96	52.174	Neolamprologus_brichardi
ENSDARG00000016543	mrm3a	94	52.164	ENSONIG00000013152	mrm3b	98	53.303	Oreochromis_niloticus
ENSDARG00000016543	mrm3a	98	51.220	ENSORLG00000028441	mrm3b	99	51.441	Oryzias_latipes
ENSDARG00000016543	mrm3a	98	51.220	ENSORLG00020009301	mrm3b	91	53.431	Oryzias_latipes_hni
ENSDARG00000016543	mrm3a	98	51.448	ENSORLG00015014199	mrm3b	99	52.116	Oryzias_latipes_hsok
ENSDARG00000016543	mrm3a	98	52.679	ENSOMEG00000000985	mrm3b	99	51.919	Oryzias_melastigma
ENSDARG00000016543	mrm3a	95	50.448	ENSPMGG00000013075	mrm3b	87	53.598	Periophthalmus_magnuspinnatus
ENSDARG00000016543	mrm3a	98	53.111	ENSPFOG00000010323	mrm3b	99	53.111	Poecilia_formosa
ENSDARG00000016543	mrm3a	98	51.429	ENSPLAG00000019061	mrm3b	99	52.655	Poecilia_latipinna
ENSDARG00000016543	mrm3a	98	52.655	ENSPMEG00000000747	mrm3b	99	52.655	Poecilia_mexicana
ENSDARG00000016543	mrm3a	93	53.349	ENSPNYG00000001035	-	97	53.488	Pundamilia_nyererei
ENSDARG00000016543	mrm3a	92	53.147	ENSPNYG00000016809	-	94	53.488	Pundamilia_nyererei
ENSDARG00000016543	mrm3a	86	49.153	ENSPNAG00000003152	mrm3b	78	53.372	Pygocentrus_nattereri
ENSDARG00000016543	mrm3a	88	51.481	ENSSFOG00015004931	mrm3	88	52.570	Scleropages_formosus
ENSDARG00000016543	mrm3a	93	54.920	ENSSMAG00000007212	mrm3b	94	54.128	Scophthalmus_maximus
ENSDARG00000016543	mrm3a	98	53.463	ENSSLDG00000011064	-	90	54.415	Seriola_lalandi_dorsalis
ENSDARG00000016543	mrm3a	98	53.463	ENSSLDG00000010991	-	90	54.415	Seriola_lalandi_dorsalis
ENSDARG00000016543	mrm3a	95	52.222	ENSSPAG00000022282	mrm3b	98	52.889	Stegastes_partitus
ENSDARG00000016543	mrm3a	95	53.153	ENSXMAG00000019121	mrm3b	96	54.157	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0006396	RNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008173	RNA methyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process