EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000016548 (Gene tree)
Gene ID: 561194
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 34572 bases
Position: chr1:45925150-45959721
Accession: ZDB-GENE-050208-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000069175	IF-2	PF11987.8	1.1e-18	1	1
ENSDARP00000069175	GTP_EFTU	PF00009.27	4.6e-32	1	1
ENSDARP00000069175	MMR_HSR1	PF01926.23	7.5e-07	1	1
ENSDARP00000069175	GTP_EFTU_D2	PF03144.25	7.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144245	-	938	-	ENSDARP00000121092	313 (aa)	-	F1R7P2
ENSDART00000074689	-	8064	XM_001923538	ENSDARP00000069175	1265 (aa)	XP_001923573	F1QB47

Gene Model

Click here to download ENSDARG00000016548's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000016548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000016548	eif5b	70	85.214	ENSAPOG00000004375	eif5b	100	74.632	Acanthochromis_polyacanthus
ENSDARG00000016548	eif5b	67	84.953	ENSACIG00000024324	eif5b	81	84.353	Amphilophus_citrinellus
ENSDARG00000016548	eif5b	70	86.682	ENSAOCG00000018386	eif5b	100	75.800	Amphiprion_ocellaris
ENSDARG00000016548	eif5b	70	81.440	ENSATEG00000011259	eif5b	87	80.540	Anabas_testudineus
ENSDARG00000016548	eif5b	70	85.827	ENSATEG00000006765	eif5b	98	73.663	Anabas_testudineus
ENSDARG00000016548	eif5b	95	70.666	ENSACAG00000008305	-	100	69.250	Anolis_carolinensis
ENSDARG00000016548	eif5b	70	80.179	ENSACLG00000005530	eif5b	64	92.444	Astatotilapia_calliptera
ENSDARG00000016548	eif5b	96	77.393	ENSAMXG00000018383	eif5b	99	76.954	Astyanax_mexicanus
ENSDARG00000016548	eif5b	93	65.540	ENSCAPG00000014619	-	73	74.664	Cavia_aperea
ENSDARG00000016548	eif5b	95	67.362	ENSCPOG00000011967	-	72	79.036	Cavia_porcellus
ENSDARG00000016548	eif5b	54	66.327	ENSCHOG00000002137	-	55	81.106	Choloepus_hoffmanni
ENSDARG00000016548	eif5b	70	83.110	ENSCSEG00000014153	eif5b	74	82.867	Cynoglossus_semilaevis
ENSDARG00000016548	eif5b	70	83.911	ENSCVAG00000019619	eif5b	100	73.137	Cyprinodon_variegatus
ENSDARG00000016548	eif5b	88	78.983	ENSELUG00000001132	eif5b	58	91.599	Esox_lucius
ENSDARG00000016548	eif5b	64	89.550	ENSGMOG00000002031	eif5b	72	76.378	Gadus_morhua
ENSDARG00000016548	eif5b	73	79.639	ENSGACG00000010536	eif5b	85	90.821	Gasterosteus_aculeatus
ENSDARG00000016548	eif5b	70	84.780	ENSHBUG00000023319	eif5b	100	74.220	Haplochromis_burtoni
ENSDARG00000016548	eif5b	95	71.837	ENSHCOG00000002807	eif5b	100	71.476	Hippocampus_comes
ENSDARG00000016548	eif5b	95	80.016	ENSIPUG00000020910	eif5b	100	80.379	Ictalurus_punctatus
ENSDARG00000016548	eif5b	70	84.537	ENSKMAG00000004325	eif5b	74	84.004	Kryptolebias_marmoratus
ENSDARG00000016548	eif5b	70	80.090	ENSLBEG00000027090	eif5b	81	80.090	Labrus_bergylta
ENSDARG00000016548	eif5b	70	85.923	ENSMAMG00000022568	eif5b	100	74.877	Mastacembelus_armatus
ENSDARG00000016548	eif5b	70	84.667	ENSMZEG00005012696	eif5b	100	74.077	Maylandia_zebra
ENSDARG00000016548	eif5b	84	70.353	ENSMODG00000001387	-	52	88.746	Monodelphis_domestica
ENSDARG00000016548	eif5b	95	72.809	ENSMALG00000005862	eif5b	100	73.017	Monopterus_albus
ENSDARG00000016548	eif5b	73	89.161	ENSMEUG00000007080	-	62	89.161	Notamacropus_eugenii
ENSDARG00000016548	eif5b	70	84.329	ENSONIG00000018749	eif5b	100	73.974	Oreochromis_niloticus
ENSDARG00000016548	eif5b	70	83.991	ENSORLG00000001525	eif5b	74	83.221	Oryzias_latipes
ENSDARG00000016548	eif5b	70	84.216	ENSORLG00020005327	eif5b	74	83.991	Oryzias_latipes_hni
ENSDARG00000016548	eif5b	70	83.766	ENSORLG00015008949	eif5b	100	72.742	Oryzias_latipes_hsok
ENSDARG00000016548	eif5b	63	83.750	ENSOMEG00000016539	eif5b	99	83.875	Oryzias_melastigma
ENSDARG00000016548	eif5b	95	73.453	ENSPKIG00000011133	eif5b	100	74.413	Paramormyrops_kingsleyae
ENSDARG00000016548	eif5b	55	78.693	ENSPSIG00000014914	-	57	90.046	Pelodiscus_sinensis
ENSDARG00000016548	eif5b	70	66.740	ENSPMAG00000004508	eif5b	73	66.963	Petromyzon_marinus
ENSDARG00000016548	eif5b	59	85.349	ENSPFOG00000007543	eif5b	100	85.081	Poecilia_formosa
ENSDARG00000016548	eif5b	70	84.424	ENSPLAG00000015913	eif5b	100	72.855	Poecilia_latipinna
ENSDARG00000016548	eif5b	70	85.102	ENSPMEG00000006712	eif5b	100	73.416	Poecilia_mexicana
ENSDARG00000016548	eif5b	63	73.024	ENSPCAG00000007829	-	65	73.024	Procavia_capensis
ENSDARG00000016548	eif5b	95	65.428	ENSPCOG00000019508	-	99	89.032	Propithecus_coquereli
ENSDARG00000016548	eif5b	78	88.158	ENSPVAG00000006592	-	74	84.270	Pteropus_vampyrus
ENSDARG00000016548	eif5b	76	81.552	ENSPNYG00000021051	eif5b	89	80.739	Pundamilia_nyererei
ENSDARG00000016548	eif5b	70	88.440	ENSPNAG00000023852	eif5b	100	81.112	Pygocentrus_nattereri
ENSDARG00000016548	eif5b	95	75.565	ENSSFOG00015000594	eif5b	100	74.839	Scleropages_formosus
ENSDARG00000016548	eif5b	82	68.696	ENSSMAG00000000045	eif5b	81	80.401	Scophthalmus_maximus
ENSDARG00000016548	eif5b	73	87.942	ENSSPAG00000005335	eif5b	61	87.942	Stegastes_partitus
ENSDARG00000016548	eif5b	65	80.292	ENSTRUG00000007772	eif5b	62	90.836	Takifugu_rubripes
ENSDARG00000016548	eif5b	72	75.751	ENSTNIG00000006580	eif5b	95	78.698	Tetraodon_nigroviridis
ENSDARG00000016548	eif5b	70	80.315	ENSXCOG00000016681	eif5b	94	80.202	Xiphophorus_couchianus
ENSDARG00000016548	eif5b	70	80.496	ENSXMAG00000001002	eif5b	94	80.383	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function