EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000016864 (Gene tree)
Gene ID: 493608
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 18940 bases
Position: chr15:42264891-42283830
Accession: ZDB-GENE-021206-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000007817	B3_4	PF03483.17	6.2e-26	1	1
ENSDARP00000007817	B5	PF03484.15	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144645	-	939	-	-	- (aa)	-	-
ENSDART00000015979	-	2052	-	ENSDARP00000007817	590 (aa)	-	F1Q820

Gene Model

Click here to download ENSDARG00000016864's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000016864's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000016864	farsb	100	75.804	ENSG00000116120	FARSB	100	75.804	Homo_sapiens
ENSDARG00000016864	farsb	100	84.915	ENSAPOG00000013072	farsb	100	79.492	Acanthochromis_polyacanthus
ENSDARG00000016864	farsb	100	76.142	ENSAMEG00000005984	FARSB	100	76.142	Ailuropoda_melanoleuca
ENSDARG00000016864	farsb	100	80.508	ENSACIG00000021623	farsb	100	80.508	Amphilophus_citrinellus
ENSDARG00000016864	farsb	100	84.407	ENSAOCG00000004912	farsb	100	81.186	Amphiprion_ocellaris
ENSDARG00000016864	farsb	100	84.746	ENSAPEG00000001153	farsb	100	79.322	Amphiprion_percula
ENSDARG00000016864	farsb	100	85.085	ENSATEG00000021441	farsb	70	85.085	Anabas_testudineus
ENSDARG00000016864	farsb	99	75.685	ENSAPLG00000010292	FARSB	99	75.685	Anas_platyrhynchos
ENSDARG00000016864	farsb	100	76.441	ENSACAG00000004769	FARSB	98	76.441	Anolis_carolinensis
ENSDARG00000016864	farsb	100	75.465	ENSANAG00000024637	FARSB	100	75.465	Aotus_nancymaae
ENSDARG00000016864	farsb	100	84.237	ENSACLG00000013951	farsb	100	82.187	Astatotilapia_calliptera
ENSDARG00000016864	farsb	85	85.200	ENSAMXG00000033881	farsb	100	85.200	Astyanax_mexicanus
ENSDARG00000016864	farsb	96	75.795	ENSBTAG00000045523	-	100	75.795	Bos_taurus
ENSDARG00000016864	farsb	100	76.988	ENSBTAG00000011649	FARSB	100	76.988	Bos_taurus
ENSDARG00000016864	farsb	100	58.516	WBGene00001498	fars-3	100	58.516	Caenorhabditis_elegans
ENSDARG00000016864	farsb	100	76.142	ENSCJAG00000012181	FARSB	100	76.142	Callithrix_jacchus
ENSDARG00000016864	farsb	100	76.650	ENSCAFG00000016094	-	100	76.650	Canis_familiaris
ENSDARG00000016864	farsb	100	73.818	ENSCAFG00020026684	FARSB	100	76.106	Canis_lupus_dingo
ENSDARG00000016864	farsb	100	77.327	ENSCHIG00000014275	FARSB	100	77.327	Capra_hircus
ENSDARG00000016864	farsb	100	76.142	ENSTSYG00000008461	FARSB	100	76.142	Carlito_syrichta
ENSDARG00000016864	farsb	96	69.965	ENSCAPG00000016436	FARSB	99	69.965	Cavia_aperea
ENSDARG00000016864	farsb	100	76.650	ENSCPOG00000013109	FARSB	100	76.650	Cavia_porcellus
ENSDARG00000016864	farsb	100	71.912	ENSCCAG00000025840	FARSB	100	71.912	Cebus_capucinus
ENSDARG00000016864	farsb	100	75.804	ENSCATG00000036168	FARSB	100	75.804	Cercocebus_atys
ENSDARG00000016864	farsb	100	76.142	ENSCLAG00000011954	FARSB	100	76.142	Chinchilla_lanigera
ENSDARG00000016864	farsb	100	75.804	ENSCSAG00000007806	FARSB	100	75.804	Chlorocebus_sabaeus
ENSDARG00000016864	farsb	81	89.888	ENSCHOG00000011785	FARSB	81	89.888	Choloepus_hoffmanni
ENSDARG00000016864	farsb	100	77.627	ENSCPBG00000019346	FARSB	98	77.627	Chrysemys_picta_bellii
ENSDARG00000016864	farsb	99	61.873	ENSCING00000004180	-	99	61.873	Ciona_intestinalis
ENSDARG00000016864	farsb	99	61.603	ENSCSAVG00000005346	-	99	61.603	Ciona_savignyi
ENSDARG00000016864	farsb	97	75.306	ENSCANG00000036239	FARSB	100	75.306	Colobus_angolensis_palliatus
ENSDARG00000016864	farsb	100	77.157	ENSCGRG00001022928	Farsb	100	77.157	Cricetulus_griseus_chok1gshd
ENSDARG00000016864	farsb	100	77.157	ENSCGRG00000001513	Farsb	100	77.157	Cricetulus_griseus_crigri
ENSDARG00000016864	farsb	100	83.729	ENSCSEG00000005415	farsb	95	83.729	Cynoglossus_semilaevis
ENSDARG00000016864	farsb	76	81.375	ENSCVAG00000018815	farsb	98	81.375	Cyprinodon_variegatus
ENSDARG00000016864	farsb	100	74.281	ENSDNOG00000002511	FARSB	100	74.281	Dasypus_novemcinctus
ENSDARG00000016864	farsb	100	75.635	ENSDORG00000011102	Farsb	100	75.635	Dipodomys_ordii
ENSDARG00000016864	farsb	100	62.521	FBgn0039175	beta-PheRS	100	62.521	Drosophila_melanogaster
ENSDARG00000016864	farsb	97	73.905	ENSETEG00000015080	FARSB	100	73.905	Echinops_telfairi
ENSDARG00000016864	farsb	100	67.343	ENSEBUG00000006846	farsb	100	67.343	Eptatretus_burgeri
ENSDARG00000016864	farsb	100	76.481	ENSEASG00005011297	FARSB	100	76.481	Equus_asinus_asinus
ENSDARG00000016864	farsb	100	73.856	ENSECAG00000023086	FARSB	99	76.374	Equus_caballus
ENSDARG00000016864	farsb	91	74.468	ENSEEUG00000007441	FARSB	91	74.468	Erinaceus_europaeus
ENSDARG00000016864	farsb	97	87.238	ENSELUG00000014767	farsb	99	87.238	Esox_lucius
ENSDARG00000016864	farsb	100	76.819	ENSFCAG00000026772	FARSB	100	76.819	Felis_catus
ENSDARG00000016864	farsb	99	74.873	ENSFALG00000006739	FARSB	99	74.873	Ficedula_albicollis
ENSDARG00000016864	farsb	100	76.481	ENSFDAG00000008871	FARSB	100	76.481	Fukomys_damarensis
ENSDARG00000016864	farsb	100	84.407	ENSFHEG00000020939	farsb	98	84.288	Fundulus_heteroclitus
ENSDARG00000016864	farsb	92	83.519	ENSGMOG00000013047	farsb	99	83.519	Gadus_morhua
ENSDARG00000016864	farsb	100	76.441	ENSGALG00000005236	FARSB	100	76.441	Gallus_gallus
ENSDARG00000016864	farsb	100	82.712	ENSGAFG00000020900	farsb	100	71.525	Gambusia_affinis
ENSDARG00000016864	farsb	92	83.704	ENSGACG00000000261	farsb	99	83.704	Gasterosteus_aculeatus
ENSDARG00000016864	farsb	100	78.475	ENSGAGG00000016575	FARSB	98	78.475	Gopherus_agassizii
ENSDARG00000016864	farsb	100	84.068	ENSHBUG00000022379	farsb	100	81.525	Haplochromis_burtoni
ENSDARG00000016864	farsb	100	75.973	ENSHGLG00000015965	FARSB	100	75.973	Heterocephalus_glaber_female
ENSDARG00000016864	farsb	100	75.973	ENSHGLG00100001035	FARSB	100	75.973	Heterocephalus_glaber_male
ENSDARG00000016864	farsb	91	76.536	ENSHCOG00000016462	farsb	100	76.536	Hippocampus_comes
ENSDARG00000016864	farsb	100	87.627	ENSIPUG00000002754	farsb	100	87.627	Ictalurus_punctatus
ENSDARG00000016864	farsb	100	76.819	ENSSTOG00000016169	FARSB	100	76.819	Ictidomys_tridecemlineatus
ENSDARG00000016864	farsb	100	76.650	ENSJJAG00000003267	Farsb	100	76.650	Jaculus_jaculus
ENSDARG00000016864	farsb	100	74.958	ENSKMAG00000005363	farsb	100	74.958	Kryptolebias_marmoratus
ENSDARG00000016864	farsb	100	84.068	ENSLBEG00000018127	farsb	70	84.068	Labrus_bergylta
ENSDARG00000016864	farsb	100	79.492	ENSLACG00000002551	FARSB	100	79.492	Latimeria_chalumnae
ENSDARG00000016864	farsb	100	84.407	ENSLOCG00000004136	farsb	100	84.407	Lepisosteus_oculatus
ENSDARG00000016864	farsb	100	75.465	ENSLAFG00000015659	FARSB	100	75.465	Loxodonta_africana
ENSDARG00000016864	farsb	100	75.635	ENSMFAG00000036645	FARSB	100	75.635	Macaca_fascicularis
ENSDARG00000016864	farsb	100	73.604	ENSMMUG00000007685	FARSB	100	73.604	Macaca_mulatta
ENSDARG00000016864	farsb	100	75.465	ENSMNEG00000030672	FARSB	100	75.465	Macaca_nemestrina
ENSDARG00000016864	farsb	100	75.804	ENSMLEG00000042060	FARSB	100	75.804	Mandrillus_leucophaeus
ENSDARG00000016864	farsb	100	84.237	ENSMAMG00000011835	farsb	100	77.458	Mastacembelus_armatus
ENSDARG00000016864	farsb	96	82.155	ENSMZEG00005004544	farsb	100	82.155	Maylandia_zebra
ENSDARG00000016864	farsb	95	75.357	ENSMGAG00000004670	FARSB	100	75.357	Meleagris_gallopavo
ENSDARG00000016864	farsb	72	82.759	ENSMAUG00000017805	Farsb	99	82.759	Mesocricetus_auratus
ENSDARG00000016864	farsb	100	76.819	ENSMICG00000002495	FARSB	100	76.819	Microcebus_murinus
ENSDARG00000016864	farsb	100	77.966	ENSMOCG00000003181	Farsb	100	77.966	Microtus_ochrogaster
ENSDARG00000016864	farsb	100	76.610	ENSMMOG00000006265	farsb	100	76.610	Mola_mola
ENSDARG00000016864	farsb	100	77.288	ENSMODG00000021192	FARSB	100	77.288	Monodelphis_domestica
ENSDARG00000016864	farsb	94	83.964	ENSMALG00000021188	farsb	92	83.964	Monopterus_albus
ENSDARG00000016864	farsb	100	76.311	MGP_CAROLIEiJ_G0014310	Farsb	100	76.311	Mus_caroli
ENSDARG00000016864	farsb	100	76.481	ENSMUSG00000026245	Farsb	100	76.481	Mus_musculus
ENSDARG00000016864	farsb	100	76.481	MGP_PahariEiJ_G0027548	Farsb	100	76.481	Mus_pahari
ENSDARG00000016864	farsb	100	76.311	MGP_SPRETEiJ_G0015116	Farsb	100	76.311	Mus_spretus
ENSDARG00000016864	farsb	100	76.650	ENSMPUG00000016677	FARSB	100	76.650	Mustela_putorius_furo
ENSDARG00000016864	farsb	100	76.819	ENSMLUG00000010904	FARSB	100	76.819	Myotis_lucifugus
ENSDARG00000016864	farsb	100	75.932	ENSNGAG00000014602	Farsb	100	75.932	Nannospalax_galili
ENSDARG00000016864	farsb	100	84.576	ENSNBRG00000003198	farsb	100	79.188	Neolamprologus_brichardi
ENSDARG00000016864	farsb	100	75.973	ENSNLEG00000009638	FARSB	100	75.973	Nomascus_leucogenys
ENSDARG00000016864	farsb	100	68.136	ENSMEUG00000010798	FARSB	100	68.136	Notamacropus_eugenii
ENSDARG00000016864	farsb	100	57.868	ENSOPRG00000003292	FARSB	100	57.868	Ochotona_princeps
ENSDARG00000016864	farsb	100	76.988	ENSODEG00000005451	FARSB	100	76.988	Octodon_degus
ENSDARG00000016864	farsb	100	84.237	ENSONIG00000014639	farsb	100	84.237	Oreochromis_niloticus
ENSDARG00000016864	farsb	91	76.306	ENSOANG00000015387	FARSB	100	76.306	Ornithorhynchus_anatinus
ENSDARG00000016864	farsb	91	76.852	ENSOCUG00000007828	FARSB	94	76.852	Oryctolagus_cuniculus
ENSDARG00000016864	farsb	100	83.898	ENSORLG00000009135	farsb	100	81.525	Oryzias_latipes
ENSDARG00000016864	farsb	100	83.729	ENSORLG00015001072	farsb	100	74.576	Oryzias_latipes_hsok
ENSDARG00000016864	farsb	100	84.237	ENSOMEG00000019009	farsb	100	80.000	Oryzias_melastigma
ENSDARG00000016864	farsb	100	70.952	ENSOGAG00000010125	FARSB	100	70.952	Otolemur_garnettii
ENSDARG00000016864	farsb	100	77.327	ENSOARG00000020329	FARSB	100	77.327	Ovis_aries
ENSDARG00000016864	farsb	100	76.311	ENSPPAG00000039268	FARSB	100	76.311	Pan_paniscus
ENSDARG00000016864	farsb	100	76.650	ENSPPRG00000010687	FARSB	100	76.650	Panthera_pardus
ENSDARG00000016864	farsb	100	76.311	ENSPTIG00000004299	FARSB	100	76.311	Panthera_tigris_altaica
ENSDARG00000016864	farsb	100	76.311	ENSPTRG00000012974	FARSB	100	76.311	Pan_troglodytes
ENSDARG00000016864	farsb	100	75.804	ENSPANG00000016304	FARSB	100	75.804	Papio_anubis
ENSDARG00000016864	farsb	100	85.593	ENSPKIG00000006661	farsb	100	85.593	Paramormyrops_kingsleyae
ENSDARG00000016864	farsb	99	76.361	ENSPSIG00000006248	FARSB	99	76.361	Pelodiscus_sinensis
ENSDARG00000016864	farsb	83	82.546	ENSPMGG00000002815	farsb	99	82.546	Periophthalmus_magnuspinnatus
ENSDARG00000016864	farsb	100	76.819	ENSPEMG00000003131	Farsb	100	76.819	Peromyscus_maniculatus_bairdii
ENSDARG00000016864	farsb	100	76.780	ENSPCIG00000019458	FARSB	100	76.780	Phascolarctos_cinereus
ENSDARG00000016864	farsb	100	83.898	ENSPLAG00000001104	farsb	100	76.502	Poecilia_latipinna
ENSDARG00000016864	farsb	100	84.237	ENSPMEG00000017658	farsb	100	76.855	Poecilia_mexicana
ENSDARG00000016864	farsb	100	83.559	ENSPREG00000010583	farsb	100	76.441	Poecilia_reticulata
ENSDARG00000016864	farsb	100	75.973	ENSPPYG00000013221	FARSB	100	75.973	Pongo_abelii
ENSDARG00000016864	farsb	85	67.665	ENSPCAG00000002757	FARSB	85	67.665	Procavia_capensis
ENSDARG00000016864	farsb	66	88.095	ENSPCOG00000028852	FARSB	100	88.095	Propithecus_coquereli
ENSDARG00000016864	farsb	100	76.311	ENSPVAG00000006985	FARSB	100	76.311	Pteropus_vampyrus
ENSDARG00000016864	farsb	100	72.881	ENSPNYG00000011433	farsb	100	72.881	Pundamilia_nyererei
ENSDARG00000016864	farsb	100	87.797	ENSPNAG00000021802	farsb	100	87.797	Pygocentrus_nattereri
ENSDARG00000016864	farsb	100	76.650	ENSRNOG00000014119	Farsb	100	76.650	Rattus_norvegicus
ENSDARG00000016864	farsb	92	75.919	ENSRBIG00000033191	FARSB	98	75.458	Rhinopithecus_bieti
ENSDARG00000016864	farsb	100	75.804	ENSRROG00000029388	FARSB	100	75.804	Rhinopithecus_roxellana
ENSDARG00000016864	farsb	100	45.499	YLR060W	FRS1	100	45.499	Saccharomyces_cerevisiae
ENSDARG00000016864	farsb	100	69.036	ENSSBOG00000019084	FARSB	100	69.036	Saimiri_boliviensis_boliviensis
ENSDARG00000016864	farsb	92	71.350	ENSSHAG00000015752	FARSB	99	71.350	Sarcophilus_harrisii
ENSDARG00000016864	farsb	100	81.525	ENSSFOG00015007850	farsb	100	81.525	Scleropages_formosus
ENSDARG00000016864	farsb	100	84.576	ENSSMAG00000020668	farsb	100	82.034	Scophthalmus_maximus
ENSDARG00000016864	farsb	100	84.237	ENSSDUG00000009685	farsb	100	79.392	Seriola_dumerili
ENSDARG00000016864	farsb	100	84.237	ENSSLDG00000025206	farsb	100	79.492	Seriola_lalandi_dorsalis
ENSDARG00000016864	farsb	61	74.150	ENSSARG00000005655	-	66	74.150	Sorex_araneus
ENSDARG00000016864	farsb	95	73.310	ENSSPUG00000002245	FARSB	100	73.310	Sphenodon_punctatus
ENSDARG00000016864	farsb	100	84.237	ENSSPAG00000007367	farsb	69	84.237	Stegastes_partitus
ENSDARG00000016864	farsb	100	75.465	ENSSSCG00000016226	-	100	75.465	Sus_scrofa
ENSDARG00000016864	farsb	100	69.712	ENSSSCG00000032016	-	100	69.712	Sus_scrofa
ENSDARG00000016864	farsb	97	76.491	ENSTGUG00000007788	FARSB	99	76.491	Taeniopygia_guttata
ENSDARG00000016864	farsb	100	81.356	ENSTRUG00000009483	farsb	70	81.356	Takifugu_rubripes
ENSDARG00000016864	farsb	100	81.864	ENSTNIG00000014310	farsb	100	81.864	Tetraodon_nigroviridis
ENSDARG00000016864	farsb	100	51.695	ENSTBEG00000003136	FARSB	100	51.695	Tupaia_belangeri
ENSDARG00000016864	farsb	88	76.884	ENSTTRG00000009082	FARSB	88	76.884	Tursiops_truncatus
ENSDARG00000016864	farsb	85	71.912	ENSUAMG00000024613	FARSB	99	71.912	Ursus_americanus
ENSDARG00000016864	farsb	100	76.311	ENSUMAG00000017995	FARSB	100	76.311	Ursus_maritimus
ENSDARG00000016864	farsb	92	73.112	ENSVPAG00000006844	FARSB	100	73.112	Vicugna_pacos
ENSDARG00000016864	farsb	100	76.650	ENSVVUG00000024025	FARSB	100	76.650	Vulpes_vulpes
ENSDARG00000016864	farsb	100	74.619	ENSXETG00000002934	farsb	100	74.619	Xenopus_tropicalis
ENSDARG00000016864	farsb	100	83.220	ENSXMAG00000008280	farsb	100	72.542	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004826	phenylalanine-tRNA ligase activity	21873635.	IBA	Function
GO:0004826	phenylalanine-tRNA ligase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0006432	phenylalanyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	-	IEA	Process
GO:0009328	phenylalanine-tRNA ligase complex	21873635.	IBA	Component
GO:0016874	ligase activity	-	IEA	Function