EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000017140 (Gene tree)
Gene ID: 393431
Gene Symbol: zgc:63587
Alias: -
Full Name: zgc:63587
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 73216 bases
Position: chr8:4621243-4694458
Accession: ZDB-GENE-040426-1175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000027643	MMR_HSR1	PF01926.23	7.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000019828	-	1669	-	ENSDARP00000027643	276 (aa)	-	Q7SY26

Gene Model

Click here to download ENSDARG00000017140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000017140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000017140	zgc:63587	86	48.133	ENSDARG00000019191	sept12	88	48.701
ENSDARG00000017140	zgc:63587	76	48.341	ENSDARG00000030656	sept3	58	48.341
ENSDARG00000017140	zgc:63587	79	57.534	ENSDARG00000019651	zgc:162239	77	57.534
ENSDARG00000017140	zgc:63587	86	83.951	ENSDARG00000027590	sept2	65	83.951
ENSDARG00000017140	zgc:63587	76	71.292	ENSDARG00000105271	SEPT4	50	71.292
ENSDARG00000017140	zgc:63587	68	57.513	ENSDARG00000052673	sept7b	97	58.659
ENSDARG00000017140	zgc:63587	80	65.766	ENSDARG00000036031	sept5b	81	65.766
ENSDARG00000017140	zgc:63587	76	64.593	ENSDARG00000102889	sept15	78	64.593
ENSDARG00000017140	zgc:63587	77	44.186	ENSDARG00000032606	sept8a	50	44.186
ENSDARG00000017140	zgc:63587	83	45.339	ENSDARG00000103900	sept9b	91	50.270
ENSDARG00000017140	zgc:63587	78	62.385	ENSDARG00000087647	sept7a	50	62.385
ENSDARG00000017140	zgc:63587	76	68.421	ENSDARG00000013843	sept5a	51	68.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000017140	zgc:63587	86	93.697	ENSAPOG00000021616	zgc:63587	68	93.697	Acanthochromis_polyacanthus
ENSDARG00000017140	zgc:63587	72	92.965	ENSACIG00000006540	zgc:63587	64	92.965	Amphilophus_citrinellus
ENSDARG00000017140	zgc:63587	86	93.697	ENSAOCG00000015026	zgc:63587	68	93.697	Amphiprion_ocellaris
ENSDARG00000017140	zgc:63587	86	93.697	ENSAPEG00000017625	zgc:63587	68	93.697	Amphiprion_percula
ENSDARG00000017140	zgc:63587	86	92.857	ENSATEG00000020519	zgc:63587	68	92.857	Anabas_testudineus
ENSDARG00000017140	zgc:63587	86	91.597	ENSACAG00000000754	-	68	91.597	Anolis_carolinensis
ENSDARG00000017140	zgc:63587	86	93.697	ENSACLG00000011287	zgc:63587	68	93.697	Astatotilapia_calliptera
ENSDARG00000017140	zgc:63587	86	94.118	ENSAMXG00000006164	zgc:63587	68	94.323	Astyanax_mexicanus
ENSDARG00000017140	zgc:63587	86	90.756	ENSCPBG00000010648	-	69	90.756	Chrysemys_picta_bellii
ENSDARG00000017140	zgc:63587	86	93.277	ENSCSEG00000019626	zgc:63587	68	93.277	Cynoglossus_semilaevis
ENSDARG00000017140	zgc:63587	86	93.277	ENSCVAG00000017959	zgc:63587	68	93.277	Cyprinodon_variegatus
ENSDARG00000017140	zgc:63587	86	94.118	ENSELUG00000009060	zgc:63587	68	94.118	Esox_lucius
ENSDARG00000017140	zgc:63587	86	91.176	ENSFALG00000008010	-	68	91.176	Ficedula_albicollis
ENSDARG00000017140	zgc:63587	86	92.437	ENSFHEG00000018583	zgc:63587	68	92.437	Fundulus_heteroclitus
ENSDARG00000017140	zgc:63587	86	93.277	ENSGMOG00000013563	zgc:63587	68	93.277	Gadus_morhua
ENSDARG00000017140	zgc:63587	86	91.597	ENSGALG00000001652	SEPT2L	68	91.597	Gallus_gallus
ENSDARG00000017140	zgc:63587	86	92.857	ENSGAFG00000000805	zgc:63587	68	92.857	Gambusia_affinis
ENSDARG00000017140	zgc:63587	86	93.277	ENSGACG00000005552	zgc:63587	68	93.277	Gasterosteus_aculeatus
ENSDARG00000017140	zgc:63587	86	90.756	ENSGAGG00000014380	-	68	90.756	Gopherus_agassizii
ENSDARG00000017140	zgc:63587	86	93.697	ENSHBUG00000013996	zgc:63587	68	93.697	Haplochromis_burtoni
ENSDARG00000017140	zgc:63587	86	94.538	ENSHCOG00000005893	zgc:63587	68	94.538	Hippocampus_comes
ENSDARG00000017140	zgc:63587	86	92.857	ENSKMAG00000003351	zgc:63587	68	92.857	Kryptolebias_marmoratus
ENSDARG00000017140	zgc:63587	86	93.277	ENSLBEG00000025452	zgc:63587	68	93.277	Labrus_bergylta
ENSDARG00000017140	zgc:63587	86	91.597	ENSLACG00000015335	zgc:63587	67	91.597	Latimeria_chalumnae
ENSDARG00000017140	zgc:63587	86	94.118	ENSLOCG00000001793	zgc:63587	68	94.118	Lepisosteus_oculatus
ENSDARG00000017140	zgc:63587	86	94.118	ENSMAMG00000014467	zgc:63587	68	94.118	Mastacembelus_armatus
ENSDARG00000017140	zgc:63587	86	93.697	ENSMZEG00005009713	zgc:63587	68	93.697	Maylandia_zebra
ENSDARG00000017140	zgc:63587	82	95.556	ENSMGAG00000001294	-	68	95.556	Meleagris_gallopavo
ENSDARG00000017140	zgc:63587	83	93.450	ENSMMOG00000011692	zgc:63587	65	93.450	Mola_mola
ENSDARG00000017140	zgc:63587	82	92.920	ENSMODG00000010193	-	61	92.920	Monodelphis_domestica
ENSDARG00000017140	zgc:63587	72	92.462	ENSMALG00000020157	zgc:63587	64	92.462	Monopterus_albus
ENSDARG00000017140	zgc:63587	86	93.697	ENSNBRG00000018582	-	68	93.697	Neolamprologus_brichardi
ENSDARG00000017140	zgc:63587	86	93.277	ENSONIG00000014408	zgc:63587	68	93.277	Oreochromis_niloticus
ENSDARG00000017140	zgc:63587	86	92.857	ENSORLG00000002669	zgc:63587	68	92.857	Oryzias_latipes
ENSDARG00000017140	zgc:63587	86	92.857	ENSORLG00020005356	zgc:63587	68	92.857	Oryzias_latipes_hni
ENSDARG00000017140	zgc:63587	86	92.857	ENSORLG00015015159	zgc:63587	68	92.857	Oryzias_latipes_hsok
ENSDARG00000017140	zgc:63587	86	92.857	ENSOMEG00000017925	zgc:63587	68	92.857	Oryzias_melastigma
ENSDARG00000017140	zgc:63587	86	93.697	ENSPKIG00000024604	zgc:63587	72	93.697	Paramormyrops_kingsleyae
ENSDARG00000017140	zgc:63587	86	90.336	ENSPSIG00000002946	-	68	90.336	Pelodiscus_sinensis
ENSDARG00000017140	zgc:63587	71	92.347	ENSPMGG00000018374	zgc:63587	62	92.347	Periophthalmus_magnuspinnatus
ENSDARG00000017140	zgc:63587	86	89.076	ENSPCIG00000025491	-	68	89.076	Phascolarctos_cinereus
ENSDARG00000017140	zgc:63587	86	93.277	ENSPFOG00000011730	zgc:63587	68	93.277	Poecilia_formosa
ENSDARG00000017140	zgc:63587	86	93.277	ENSPLAG00000018604	zgc:63587	68	93.277	Poecilia_latipinna
ENSDARG00000017140	zgc:63587	86	92.857	ENSPMEG00000004117	zgc:63587	68	92.857	Poecilia_mexicana
ENSDARG00000017140	zgc:63587	86	92.437	ENSPREG00000011612	zgc:63587	68	92.437	Poecilia_reticulata
ENSDARG00000017140	zgc:63587	86	93.697	ENSPNYG00000008409	zgc:63587	68	93.697	Pundamilia_nyererei
ENSDARG00000017140	zgc:63587	86	93.277	ENSPNAG00000000463	zgc:63587	61	93.450	Pygocentrus_nattereri
ENSDARG00000017140	zgc:63587	86	89.076	ENSSHAG00000011013	-	68	89.076	Sarcophilus_harrisii
ENSDARG00000017140	zgc:63587	86	93.697	ENSSFOG00015014108	zgc:63587	68	93.697	Scleropages_formosus
ENSDARG00000017140	zgc:63587	86	93.277	ENSSMAG00000006113	-	68	93.277	Scophthalmus_maximus
ENSDARG00000017140	zgc:63587	83	93.478	ENSSDUG00000002763	zgc:63587	64	93.478	Seriola_dumerili
ENSDARG00000017140	zgc:63587	86	93.697	ENSSLDG00000004826	zgc:63587	68	93.697	Seriola_lalandi_dorsalis
ENSDARG00000017140	zgc:63587	86	90.756	ENSSPUG00000015358	-	68	90.756	Sphenodon_punctatus
ENSDARG00000017140	zgc:63587	72	97.980	ENSSPAG00000000807	zgc:63587	63	97.980	Stegastes_partitus
ENSDARG00000017140	zgc:63587	86	93.277	ENSSPAG00000015654	-	68	93.277	Stegastes_partitus
ENSDARG00000017140	zgc:63587	86	91.597	ENSTGUG00000008445	-	68	91.597	Taeniopygia_guttata
ENSDARG00000017140	zgc:63587	86	93.697	ENSTRUG00000016492	zgc:63587	72	93.697	Takifugu_rubripes
ENSDARG00000017140	zgc:63587	86	92.857	ENSTNIG00000015927	zgc:63587	68	92.857	Tetraodon_nigroviridis
ENSDARG00000017140	zgc:63587	86	91.597	ENSXETG00000018605	sept2-a	67	91.597	Xenopus_tropicalis
ENSDARG00000017140	zgc:63587	86	92.857	ENSXCOG00000002678	zgc:63587	70	92.857	Xiphophorus_couchianus
ENSDARG00000017140	zgc:63587	86	92.857	ENSXMAG00000014718	zgc:63587	68	92.857	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005940	septin ring	21873635.	IBA	Component
GO:0015630	microtubule cytoskeleton	21873635.	IBA	Component
GO:0031105	septin complex	21873635.	IBA	Component
GO:0051301	cell division	-	IEA	Process
GO:0060090	molecular adaptor activity	21873635.	IBA	Function
GO:0061640	cytoskeleton-dependent cytokinesis	21873635.	IBA	Process