EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000018192 (Gene tree)
Gene ID: 334627
Gene Symbol: ubr5
Alias: edd1|wu:fa16c12
Full Name: ubiquitin protein ligase E3 component n-recognin 5
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 104240 bases
Position: chr16:52542550-52646789
Accession: ZDB-GENE-030131-6559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000033510	PABP	PF00658.18	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000035761	-	8388	XM_005158437	ENSDARP00000033510	2795 (aa)	XP_005158494	F1Q8J2

Gene Model

Click here to download ENSDARG00000018192's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000018192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000018192	ubr5	100	89.693	ENSG00000104517	UBR5	100	89.658	Homo_sapiens
ENSDARG00000018192	ubr5	100	93.279	ENSAPOG00000007770	ubr5	100	93.385	Acanthochromis_polyacanthus
ENSDARG00000018192	ubr5	100	88.885	ENSAMEG00000014808	UBR5	100	88.671	Ailuropoda_melanoleuca
ENSDARG00000018192	ubr5	91	94.053	ENSACIG00000003786	ubr5	100	93.975	Amphilophus_citrinellus
ENSDARG00000018192	ubr5	91	93.723	ENSAPEG00000007895	ubr5	100	93.645	Amphiprion_percula
ENSDARG00000018192	ubr5	91	94.780	ENSATEG00000024796	ubr5	100	94.702	Anabas_testudineus
ENSDARG00000018192	ubr5	99	89.411	ENSAPLG00000004191	UBR5	100	89.124	Anas_platyrhynchos
ENSDARG00000018192	ubr5	87	88.807	ENSACAG00000008995	UBR5	99	88.561	Anolis_carolinensis
ENSDARG00000018192	ubr5	100	89.665	ENSANAG00000032305	UBR5	100	89.629	Aotus_nancymaae
ENSDARG00000018192	ubr5	100	93.322	ENSACLG00000011122	ubr5	100	93.427	Astatotilapia_calliptera
ENSDARG00000018192	ubr5	91	96.781	ENSAMXG00000020014	ubr5	100	96.781	Astyanax_mexicanus
ENSDARG00000018192	ubr5	100	89.586	ENSBTAG00000021209	UBR5	100	89.551	Bos_taurus
ENSDARG00000018192	ubr5	100	89.658	ENSCJAG00000015960	UBR5	100	89.622	Callithrix_jacchus
ENSDARG00000018192	ubr5	100	89.551	ENSCAFG00000000619	UBR5	100	89.515	Canis_familiaris
ENSDARG00000018192	ubr5	100	89.451	ENSCAFG00020000901	UBR5	100	89.202	Canis_lupus_dingo
ENSDARG00000018192	ubr5	100	89.622	ENSCHIG00000020937	UBR5	100	89.586	Capra_hircus
ENSDARG00000018192	ubr5	99	88.833	ENSTSYG00000011411	UBR5	99	88.798	Carlito_syrichta
ENSDARG00000018192	ubr5	99	82.638	ENSCPOG00000009637	UBR5	100	82.602	Cavia_porcellus
ENSDARG00000018192	ubr5	100	89.693	ENSCCAG00000037120	UBR5	100	89.658	Cebus_capucinus
ENSDARG00000018192	ubr5	100	89.558	ENSCATG00000035969	UBR5	100	89.522	Cercocebus_atys
ENSDARG00000018192	ubr5	99	89.304	ENSCLAG00000005604	UBR5	99	89.268	Chinchilla_lanigera
ENSDARG00000018192	ubr5	100	89.479	ENSCSAG00000011959	UBR5	100	89.444	Chlorocebus_sabaeus
ENSDARG00000018192	ubr5	87	95.455	ENSCHOG00000013701	UBR5	87	95.455	Choloepus_hoffmanni
ENSDARG00000018192	ubr5	100	89.658	ENSCPBG00000026166	UBR5	100	89.622	Chrysemys_picta_bellii
ENSDARG00000018192	ubr5	55	41.291	ENSCING00000008630	-	100	40.824	Ciona_intestinalis
ENSDARG00000018192	ubr5	99	89.616	ENSCANG00000041171	UBR5	100	89.580	Colobus_angolensis_palliatus
ENSDARG00000018192	ubr5	97	92.933	ENSCGRG00001002960	Ubr5	100	83.785	Cricetulus_griseus_chok1gshd
ENSDARG00000018192	ubr5	99	85.771	ENSCGRG00000005867	Ubr5	99	85.740	Cricetulus_griseus_crigri
ENSDARG00000018192	ubr5	100	92.489	ENSCSEG00000008448	ubr5	98	92.489	Cynoglossus_semilaevis
ENSDARG00000018192	ubr5	91	93.642	ENSCVAG00000021987	ubr5	100	93.642	Cyprinodon_variegatus
ENSDARG00000018192	ubr5	99	87.006	ENSDNOG00000007897	UBR5	99	86.579	Dasypus_novemcinctus
ENSDARG00000018192	ubr5	99	89.080	ENSDORG00000007058	Ubr5	99	89.009	Dipodomys_ordii
ENSDARG00000018192	ubr5	97	52.932	FBgn0002431	hyd	94	52.632	Drosophila_melanogaster
ENSDARG00000018192	ubr5	78	97.143	ENSETEG00000020339	UBR5	78	97.143	Echinops_telfairi
ENSDARG00000018192	ubr5	100	89.416	ENSEASG00005001629	UBR5	100	89.380	Equus_asinus_asinus
ENSDARG00000018192	ubr5	91	89.319	ENSECAG00000015755	UBR5	100	89.280	Equus_caballus
ENSDARG00000018192	ubr5	91	94.673	ENSELUG00000005362	ubr5	100	94.634	Esox_lucius
ENSDARG00000018192	ubr5	100	89.515	ENSFCAG00000011214	UBR5	100	89.479	Felis_catus
ENSDARG00000018192	ubr5	99	89.511	ENSFALG00000005901	UBR5	99	89.476	Ficedula_albicollis
ENSDARG00000018192	ubr5	99	89.336	ENSFDAG00000014793	UBR5	99	89.300	Fukomys_damarensis
ENSDARG00000018192	ubr5	91	93.527	ENSFHEG00000019770	ubr5	100	93.527	Fundulus_heteroclitus
ENSDARG00000018192	ubr5	99	93.683	ENSGMOG00000018440	ubr5	100	93.611	Gadus_morhua
ENSDARG00000018192	ubr5	100	87.696	ENSGALG00000031282	UBR5	100	87.696	Gallus_gallus
ENSDARG00000018192	ubr5	99	93.815	ENSGACG00000004642	ubr5	100	93.983	Gasterosteus_aculeatus
ENSDARG00000018192	ubr5	99	89.408	ENSGGOG00000003058	UBR5	99	89.372	Gorilla_gorilla
ENSDARG00000018192	ubr5	87	95.179	ENSHBUG00000021803	ubr5	99	95.097	Haplochromis_burtoni
ENSDARG00000018192	ubr5	100	89.408	ENSHGLG00000010405	UBR5	100	89.337	Heterocephalus_glaber_female
ENSDARG00000018192	ubr5	99	87.823	ENSHGLG00100004167	UBR5	99	87.751	Heterocephalus_glaber_male
ENSDARG00000018192	ubr5	91	93.691	ENSHCOG00000014022	ubr5	100	93.534	Hippocampus_comes
ENSDARG00000018192	ubr5	87	95.589	ENSIPUG00000023090	ubr5	99	95.589	Ictalurus_punctatus
ENSDARG00000018192	ubr5	99	89.224	ENSSTOG00000005328	UBR5	99	89.188	Ictidomys_tridecemlineatus
ENSDARG00000018192	ubr5	100	89.372	ENSJJAG00000013619	Ubr5	100	89.337	Jaculus_jaculus
ENSDARG00000018192	ubr5	100	92.566	ENSKMAG00000001452	ubr5	100	92.602	Kryptolebias_marmoratus
ENSDARG00000018192	ubr5	100	91.423	ENSLBEG00000024613	ubr5	100	91.584	Labrus_bergylta
ENSDARG00000018192	ubr5	99	89.370	ENSLACG00000012137	UBR5	100	89.295	Latimeria_chalumnae
ENSDARG00000018192	ubr5	100	92.360	ENSLOCG00000009882	ubr5	100	92.466	Lepisosteus_oculatus
ENSDARG00000018192	ubr5	100	89.693	ENSMFAG00000044216	UBR5	100	89.658	Macaca_fascicularis
ENSDARG00000018192	ubr5	100	89.479	ENSMMUG00000020766	UBR5	100	89.444	Macaca_mulatta
ENSDARG00000018192	ubr5	100	89.622	ENSMNEG00000028834	UBR5	100	89.586	Macaca_nemestrina
ENSDARG00000018192	ubr5	100	89.693	ENSMLEG00000039922	UBR5	100	89.658	Mandrillus_leucophaeus
ENSDARG00000018192	ubr5	91	94.898	ENSMZEG00005025460	ubr5	100	94.819	Maylandia_zebra
ENSDARG00000018192	ubr5	79	89.110	ENSMGAG00000012296	-	99	88.929	Meleagris_gallopavo
ENSDARG00000018192	ubr5	100	89.123	ENSMAUG00000018902	Ubr5	100	89.087	Mesocricetus_auratus
ENSDARG00000018192	ubr5	100	89.412	ENSMICG00000014824	UBR5	100	89.376	Microcebus_murinus
ENSDARG00000018192	ubr5	100	89.158	ENSMOCG00000019809	Ubr5	100	89.123	Microtus_ochrogaster
ENSDARG00000018192	ubr5	91	91.954	ENSMMOG00000018266	ubr5	100	92.072	Mola_mola
ENSDARG00000018192	ubr5	99	89.404	ENSMODG00000005976	UBR5	100	89.368	Monodelphis_domestica
ENSDARG00000018192	ubr5	91	94.152	ENSMALG00000008018	ubr5	100	93.995	Monopterus_albus
ENSDARG00000018192	ubr5	100	89.016	MGP_CAROLIEiJ_G0019748	Ubr5	100	88.980	Mus_caroli
ENSDARG00000018192	ubr5	100	89.087	ENSMUSG00000037487	Ubr5	100	89.051	Mus_musculus
ENSDARG00000018192	ubr5	100	89.119	MGP_PahariEiJ_G0019757	Ubr5	100	89.083	Mus_pahari
ENSDARG00000018192	ubr5	100	89.158	MGP_SPRETEiJ_G0020645	Ubr5	100	89.123	Mus_spretus
ENSDARG00000018192	ubr5	91	89.163	ENSMPUG00000015136	UBR5	100	89.124	Mustela_putorius_furo
ENSDARG00000018192	ubr5	99	88.965	ENSMLUG00000008052	UBR5	100	88.535	Myotis_lucifugus
ENSDARG00000018192	ubr5	100	89.444	ENSNGAG00000001915	Ubr5	100	89.408	Nannospalax_galili
ENSDARG00000018192	ubr5	87	94.451	ENSNBRG00000001982	ubr5	99	94.369	Neolamprologus_brichardi
ENSDARG00000018192	ubr5	99	89.472	ENSNLEG00000003404	UBR5	100	89.436	Nomascus_leucogenys
ENSDARG00000018192	ubr5	69	92.827	ENSMEUG00000004964	-	68	88.304	Notamacropus_eugenii
ENSDARG00000018192	ubr5	82	99.320	ENSOPRG00000004459	UBR5	82	99.320	Ochotona_princeps
ENSDARG00000018192	ubr5	100	89.337	ENSODEG00000001200	UBR5	100	89.301	Octodon_degus
ENSDARG00000018192	ubr5	100	94.609	ENSONIG00000016431	ubr5	100	94.466	Oreochromis_niloticus
ENSDARG00000018192	ubr5	91	89.358	ENSOANG00000013340	-	100	89.319	Ornithorhynchus_anatinus
ENSDARG00000018192	ubr5	100	88.137	ENSOCUG00000008549	UBR5	99	87.674	Oryctolagus_cuniculus
ENSDARG00000018192	ubr5	100	92.769	ENSORLG00000003009	ubr5	100	92.875	Oryzias_latipes
ENSDARG00000018192	ubr5	91	94.275	ENSORLG00020022466	ubr5	100	94.157	Oryzias_latipes_hni
ENSDARG00000018192	ubr5	100	93.593	ENSORLG00015012347	ubr5	100	93.699	Oryzias_latipes_hsok
ENSDARG00000018192	ubr5	91	92.970	ENSOMEG00000014794	ubr5	100	93.049	Oryzias_melastigma
ENSDARG00000018192	ubr5	100	89.408	ENSOGAG00000004491	UBR5	100	89.372	Otolemur_garnettii
ENSDARG00000018192	ubr5	99	89.300	ENSOARG00000017554	UBR5	98	89.264	Ovis_aries
ENSDARG00000018192	ubr5	100	87.941	ENSPPAG00000040534	UBR5	100	88.298	Pan_paniscus
ENSDARG00000018192	ubr5	99	89.220	ENSPPRG00000001290	UBR5	100	89.184	Panthera_pardus
ENSDARG00000018192	ubr5	99	88.378	ENSPTIG00000016223	UBR5	99	88.342	Panthera_tigris_altaica
ENSDARG00000018192	ubr5	100	89.622	ENSPTRG00000020482	UBR5	100	89.586	Pan_troglodytes
ENSDARG00000018192	ubr5	100	89.479	ENSPANG00000017236	UBR5	100	89.444	Papio_anubis
ENSDARG00000018192	ubr5	100	86.236	ENSPKIG00000016015	UBR5	100	85.988	Paramormyrops_kingsleyae
ENSDARG00000018192	ubr5	86	90.342	ENSPKIG00000005940	ubr5	99	89.991	Paramormyrops_kingsleyae
ENSDARG00000018192	ubr5	99	89.634	ENSPSIG00000013244	UBR5	100	89.204	Pelodiscus_sinensis
ENSDARG00000018192	ubr5	100	91.065	ENSPMGG00000022205	ubr5	100	91.029	Periophthalmus_magnuspinnatus
ENSDARG00000018192	ubr5	100	88.774	ENSPEMG00000020823	Ubr5	100	88.988	Peromyscus_maniculatus_bairdii
ENSDARG00000018192	ubr5	91	93.552	ENSPFOG00000012957	ubr5	100	93.552	Poecilia_formosa
ENSDARG00000018192	ubr5	87	93.655	ENSPLAG00000008530	ubr5	99	93.655	Poecilia_latipinna
ENSDARG00000018192	ubr5	87	92.089	ENSPMEG00000019322	ubr5	99	91.921	Poecilia_mexicana
ENSDARG00000018192	ubr5	100	92.269	ENSPREG00000016584	ubr5	100	92.343	Poecilia_reticulata
ENSDARG00000018192	ubr5	97	90.000	ENSPPYG00000018797	UBR5	100	89.524	Pongo_abelii
ENSDARG00000018192	ubr5	81	90.308	ENSPCAG00000001160	UBR5	81	90.308	Procavia_capensis
ENSDARG00000018192	ubr5	100	88.239	ENSPCOG00000014399	UBR5	100	88.204	Propithecus_coquereli
ENSDARG00000018192	ubr5	90	99.320	ENSPVAG00000012646	UBR5	90	99.320	Pteropus_vampyrus
ENSDARG00000018192	ubr5	87	94.906	ENSPNYG00000004164	ubr5	99	94.823	Pundamilia_nyererei
ENSDARG00000018192	ubr5	91	95.406	ENSPNAG00000001318	ubr5	100	95.406	Pygocentrus_nattereri
ENSDARG00000018192	ubr5	87	87.228	ENSRNOG00000006816	Ubr5	99	87.187	Rattus_norvegicus
ENSDARG00000018192	ubr5	99	86.564	ENSRBIG00000038821	UBR5	100	86.113	Rhinopithecus_bieti
ENSDARG00000018192	ubr5	100	88.269	ENSRROG00000040919	UBR5	100	88.233	Rhinopithecus_roxellana
ENSDARG00000018192	ubr5	100	89.765	ENSSBOG00000025123	UBR5	100	89.729	Saimiri_boliviensis_boliviensis
ENSDARG00000018192	ubr5	100	89.597	ENSSHAG00000017701	UBR5	100	89.384	Sarcophilus_harrisii
ENSDARG00000018192	ubr5	91	92.030	ENSSFOG00015003412	ubr5	100	91.873	Scleropages_formosus
ENSDARG00000018192	ubr5	91	93.370	ENSSMAG00000010194	ubr5	100	93.370	Scophthalmus_maximus
ENSDARG00000018192	ubr5	91	94.623	ENSSDUG00000008072	ubr5	100	94.584	Seriola_dumerili
ENSDARG00000018192	ubr5	100	93.191	ENSSLDG00000013014	ubr5	100	94.545	Seriola_lalandi_dorsalis
ENSDARG00000018192	ubr5	91	94.340	ENSSARG00000000171	UBR5	91	94.340	Sorex_araneus
ENSDARG00000018192	ubr5	91	93.858	ENSSPAG00000015131	ubr5	100	93.779	Stegastes_partitus
ENSDARG00000018192	ubr5	100	89.337	ENSSSCG00000022479	UBR5	100	89.301	Sus_scrofa
ENSDARG00000018192	ubr5	99	89.232	ENSTGUG00000012099	UBR5	100	89.196	Taeniopygia_guttata
ENSDARG00000018192	ubr5	91	93.310	ENSTRUG00000010399	ubr5	100	93.193	Takifugu_rubripes
ENSDARG00000018192	ubr5	99	90.299	ENSTNIG00000013292	ubr5	100	90.083	Tetraodon_nigroviridis
ENSDARG00000018192	ubr5	87	100.000	ENSTBEG00000015656	UBR5	89	100.000	Tupaia_belangeri
ENSDARG00000018192	ubr5	87	90.476	ENSTTRG00000000492	UBR5	86	91.667	Tursiops_truncatus
ENSDARG00000018192	ubr5	98	89.180	ENSUMAG00000017960	UBR5	100	89.180	Ursus_maritimus
ENSDARG00000018192	ubr5	90	91.985	ENSVPAG00000008376	UBR5	94	91.985	Vicugna_pacos
ENSDARG00000018192	ubr5	98	89.474	ENSVVUG00000013461	UBR5	100	89.220	Vulpes_vulpes
ENSDARG00000018192	ubr5	100	87.741	ENSXETG00000031995	UBR5	100	87.598	Xenopus_tropicalis
ENSDARG00000018192	ubr5	76	100.000	ENSXCOG00000017034	ubr5	99	89.247	Xiphophorus_couchianus
ENSDARG00000018192	ubr5	87	93.490	ENSXMAG00000002429	ubr5	99	93.490	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000209	protein polyubiquitination	21873635.	IBA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0004842	ubiquitin-protein transferase activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0043130	ubiquitin binding	-	IEA	Function
GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	21873635.	IBA	Process